DK946759
Clone id YMU02A01NGRL0013_K12
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_K12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCGGACCTCAAATCAGGCAAGGCTACCCGCTGAGTTTAAGCATATCACTAAGCGGAGGAA
AAGAAACTAACAAGGATTTCCCTAGTAGCGGCGAGCGAACCGGAAAGAGCCCAGCTTGAG
AATCGCGCGGCCCCGCCGTGCGAATTGTAGTCTGGAGAGGCGTCCTCTGCGACGGACCGG
GCCCAAGTCCCCTGGAAAGGGGCGTCAGAGAGGGTGAGAGCCCCGTCGAGCTCGGACCCT
GTCGCTCCACGAGGCGCCGTCGACGAGTCGGGCTGTTTGGGAATGCAGCCCTAAGTGGGT
GGTAGATTCCATCCAAGGCTAAATACGGGCAAGAGACCGATAGCGAACAAGTACCGCGAG
GGAAAGATGAAAAGGACTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6CQE5
Definition sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis
Align length 41
Score (bit) 65.5
E-value 8.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946759|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_K12, 5'
(381 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR... 65 8e-11
sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN... 65 1e-10
sp|Q80UW5|MRCKG_MOUSE Serine/threonine-protein kinase MRCK gamma... 35 0.088
sp|Q6DT37|MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma... 35 0.088
sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculu... 31 1.7
sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattu... 31 1.7
sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus... 31 1.7
sp|B0TS25|UBID_SHEHH 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 27 3.7
sp|Q99PJ7|ZN689_RAT Zinc finger protein 689 OS=Rattus norvegicus... 30 3.7
sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallid... 30 3.7
sp|Q0HQV0|UBID_SHESR 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 4.7
sp|Q0HMY1|UBID_SHESM 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 4.7
sp|A0KSH7|UBID_SHESA 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 4.7
sp|A9L4M9|UBID_SHEB9 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 4.7
sp|A6WT44|UBID_SHEB8 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 4.7
sp|A3CZT2|UBID_SHEB5 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 4.7
sp|Q31FH4|Y1507_THICR Maf-like protein Tcr_1507 OS=Thiomicrospir... 30 4.8
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 30 4.8
sp|P20160|CAP7_HUMAN Azurocidin OS=Homo sapiens GN=AZU1 PE=1 SV=3 30 4.8
sp|A1RFJ5|UBID_SHESW 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 6.1
sp|A4YAT1|UBID_SHEPC 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 6.1
sp|Q8K1S7|KREM2_MOUSE Kremen protein 2 OS=Mus musculus GN=Kremen... 29 6.3
sp|P38968|SEC31_YEAST Protein transport protein SEC31 OS=Sacchar... 29 8.2
sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1... 29 8.2
sp|Q8UJ51|IF2_AGRT5 Translation initiation factor IF-2 OS=Agroba... 29 8.2
sp|A2VDR9|ZN750_BOVIN Protein ZNF750 OS=Bos taurus GN=ZNF750 PE=... 29 8.2
sp|Q86UD0|CI140_HUMAN Protein C9orf140 OS=Homo sapiens GN=C9orf1... 29 8.2

>sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR1-A
PE=4 SV=2
Length = 109

Score = 65.5 bits (158), Expect = 8e-11
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRR 257
K FSSF TCSLSVS YLALDGIYHPLRAAFPN+ TRR+
Sbjct: 21 KFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRK 61


>sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae
GN=TAR1 PE=2 SV=1
Length = 124

Score = 64.7 bits (156), Expect = 1e-10
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLVERQ 239
K FSSF TCSLSVS YLALDGIYHPLRAAFPN+ T RR + +
Sbjct: 36 KFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNR 82


>sp|Q80UW5|MRCKG_MOUSE Serine/threonine-protein kinase MRCK gamma
OS=Mus musculus GN=Cdc42bpg PE=2 SV=2
Length = 1551

Score = 35.4 bits (80), Expect = 0.088
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3

Query: 120 ESRGPAVRIVVWRGVLCD--GPGPSPLERGVREGESPVELGPCRSTRRRRRVGLFGNAAL 293
++R P + + V R VLC GPGP P +R +RE ++P + R VG G AL
Sbjct: 1188 QARTPVLCVAVKRQVLCYQLGPGPGPWQRRIRELQAPAPVQSLGLLGDRLCVGAAGTFAL 1247


>sp|Q6DT37|MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma
OS=Homo sapiens GN=CDC42BPG PE=1 SV=1
Length = 1551

Score = 35.4 bits (80), Expect = 0.088
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3

Query: 120 ESRGPAVRIVVWRGVLCD--GPGPSPLERGVREGESPVELGPCRSTRRRRRVGLFGNAAL 293
++R P + + V R VLC GPGP P +R +RE ++P + R VG G AL
Sbjct: 1189 QARTPVLCVAVKRQVLCYQLGPGPGPWQRRIRELQAPATVQSLGLLGDRLCVGAAGGFAL 1248


>sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculus
GN=Prox2 PE=2 SV=1
Length = 593

Score = 31.2 bits (69), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2

Query: 173 RTGPKSPGKGRQRG*EPRRARTLSLHEAPSTSRAVWECSPK 295
R + P KGR+R +R ++L +H+ P S WE PK
Sbjct: 89 RESLRCPEKGRER----KRKQSLPMHQGPLKSSPAWERGPK 125


>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus
norvegicus GN=March11 PE=1 SV=1
Length = 398

Score = 31.2 bits (69), Expect = 1.7
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3

Query: 177 PGPSPLERGVREGESPVELGPCR 245
P P+PLER V GE PVEL P R
Sbjct: 45 PLPAPLERIVGSGEPPVELAPRR 67


>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus
musculus GN=March11 PE=2 SV=2
Length = 400

Score = 31.2 bits (69), Expect = 1.7
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3

Query: 177 PGPSPLERGVREGESPVELGPCR 245
P P+PLER V GE PVEL P R
Sbjct: 45 PLPAPLERIVGSGEPPVELAPRR 67


>sp|B0TS25|UBID_SHEHH 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiD PE=3
SV=1
Length = 493

Score = 26.9 bits (58), Expect(2) = 3.7
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -2

Query: 362 PSRYLFAIGLLPVFSLGWNLPPT*GCIPKQPDSSTAPRGATGSELDGALTLSDAPFQGTW 183
PS + AI +P+F N+PP + P + TG E+D L+ P Q W
Sbjct: 98 PSGFKDAIAKIPMFKQALNMPPK---TVRNPPCQQVVK--TGEEVD----LTKLPIQHCW 148

Query: 182 ARSVA 168
VA
Sbjct: 149 PGDVA 153



Score = 22.7 bits (47), Expect(2) = 3.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3

Query: 139 TAGPRDSQAGLFPVRSPLLGKSLLV 65
T GPR + L R LLGK L+
Sbjct: 163 TKGPRQKRQNLGIYRQQLLGKDKLI 187


>sp|Q99PJ7|ZN689_RAT Zinc finger protein 689 OS=Rattus norvegicus
GN=Znf689 PE=2 SV=1
Length = 500

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1

Query: 219 SHPL*RPFPGDLGPVRRRGRLSR-LQFA 139
S PL PG++GP RRRGR R L+FA
Sbjct: 5 SAPLLEQAPGEVGPTRRRGRRPRALKFA 32


>sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallidum
GN=TP_0975 PE=3 SV=1
Length = 274

Score = 30.0 bits (66), Expect = 3.7
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = -1

Query: 300 THLGLHSQTARLVDGASWSDRVRARRGSHPL*RPFPGDLGPVRRRGRLSRLQFARRGRA 124
+H G+H RLV + ++ ARR H L P L P + RGR Q ARR RA
Sbjct: 44 SHFGIHK---RLVSCRAHNEAQAARRLIHFLSTPISAFLSPEKGRGR----QSARRTRA 95


tr_hit_id A5BKB8
Definition tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 103
Score (bit) 127.0
E-value 4.0e-28
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946759|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_K12, 5'
(381 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis... 127 4e-28
tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01... 89 1e-16
tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematoste... 78 2e-13
tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematoste... 78 2e-13
tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematoste... 78 2e-13
tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematoste... 78 2e-13
tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematoste... 78 2e-13
tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematoste... 77 3e-13
tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematoste... 75 2e-12
tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematoste... 75 2e-12
tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematoste... 75 2e-12
tr|A7T1X8|A7T1X8_NEMVE Predicted protein (Fragment) OS=Nematoste... 72 2e-11
tr|A8DWE6|A8DWE6_NEMVE Predicted protein (Fragment) OS=Nematoste... 71 3e-11
tr|A9TBN2|A9TBN2_PHYPA Predicted protein (Fragment) OS=Physcomit... 68 2e-10
tr|A9U5J8|A9U5J8_PHYPA Predicted protein OS=Physcomitrella paten... 67 3e-10
tr|Q3KTL6|Q3KTL6_SCHJA SJCHGC01393 protein OS=Schistosoma japoni... 64 4e-09
tr|B1N5S6|B1N5S6_ENTHI Putative uncharacterized protein OS=Entam... 64 4e-09
tr|A9PE13|A9PE13_POPTR Putative uncharacterized protein OS=Popul... 59 9e-08
tr|A8NLF8|A8NLF8_BRUMA Putative uncharacterized protein (Fragmen... 59 9e-08
tr|A5AFX7|A5AFX7_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-07
tr|Q223Q7|Q223Q7_TETTH Putative uncharacterized protein OS=Tetra... 55 2e-06
tr|B7RDP9|B7RDP9_9THEM Putative uncharacterized protein OS=Marin... 36 2e-04
tr|A5B938|A5B938_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003
tr|A8PGP3|A8PGP3_BRUMA Putative uncharacterized protein OS=Brugi... 42 0.012
tr|Q57T06|Q57T06_SALCH Putative uncharacterized protein OS=Salmo... 39 0.022
tr|Q57J74|Q57J74_SALCH Putative uncharacterized protein OS=Salmo... 39 0.023
tr|B6LZP2|B6LZP2_BRAFL Putative uncharacterized protein OS=Branc... 41 0.033
tr|A1CUU5|A1CUU5_NEOFI Putative uncharacterized protein OS=Neosa... 40 0.044
tr|Q652R5|Q652R5_ORYSJ Putative uncharacterized protein P0603C10... 35 0.072
tr|A4XBY0|A4XBY0_SALTO Putative uncharacterized protein OS=Salin... 38 0.28

>tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001840 PE=4 SV=1
Length = 347

Score = 127 bits (318), Expect = 4e-28
Identities = 66/103 (64%), Positives = 72/103 (69%)
Frame = +1

Query: 73 RISLVAASEPERAQLENRAAPPCEL*SGEASSATDRAQVPWKGASERVRAPSSSDPVAPR 252
R+ + + P+ P SGEASSA DRAQVP KGA ERVRAPS DPVAPR
Sbjct: 238 RLGVARVTSPQGPPTRTARDPRSRPQSGEASSAADRAQVPXKGAPERVRAPSCPDPVAPR 297

Query: 253 GAVDESGCLGMQP*VGGRFHPRLNTGKRPIANKYREGKMKRTL 381
GAV ESGC GMQ GG+F PRLNTG+RPIANK REGKMKRTL
Sbjct: 298 GAVGESGCXGMQXQSGGKFRPRLNTGERPIANKCREGKMKRTL 340


>tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01.18
OS=Oryza sativa subsp. japonica GN=P0459B01.18 PE=4 SV=1
Length = 109

Score = 89.0 bits (219), Expect = 1e-16
Identities = 44/52 (84%), Positives = 44/52 (84%)
Frame = -2

Query: 227 DGALTLSDAPFQGTWARSVAEDASPDYNSHGGAARFSSWALSGSLAATREIL 72
DGALTL APFQGTWARSVAEDASPDYNS G AARFSSWA GSLA TR IL
Sbjct: 3 DGALTLPGAPFQGTWARSVAEDASPDYNSDGAAARFSSWASPGSLAVTRGIL 54


>tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g76701 PE=4 SV=1
Length = 70

Score = 77.8 bits (190), Expect(2) = 2e-13
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR+ +V
Sbjct: 15 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58



Score = 20.8 bits (42), Expect(2) = 2e-13
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1

Query: 246 SDRVRARRGSHP 211
+DR R RRG HP
Sbjct: 59 NDRGRRRRGFHP 70


>tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g69522 PE=4 SV=1
Length = 67

Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR+ +V
Sbjct: 15 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g152336 PE=4 SV=1
Length = 130

Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR+ +V
Sbjct: 31 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 74


>tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g76780 PE=4 SV=1
Length = 70

Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR+ +V
Sbjct: 15 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g153457 PE=4 SV=1
Length = 59

Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR+ +V
Sbjct: 15 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g156477 PE=4 SV=1
Length = 60

Score = 77.4 bits (189), Expect = 3e-13
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRR 254
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR+R
Sbjct: 15 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKR 56


>tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g67728 PE=4 SV=1
Length = 76

Score = 74.7 bits (182), Expect = 2e-12
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
K FSSFP GTCSLSVSC YLALDG+Y P AAFPN+PTRR+ +V
Sbjct: 21 KCFSSFPHGTCSLSVSCQYLALDGVYQPFWAAFPNNPTRRKHIV 64


>tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g126693 PE=4 SV=1
Length = 54

Score = 74.7 bits (182), Expect = 2e-12
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -3

Query: 379 KSFSSFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRR 260
K FSSFP GTCSLSVSC YLALDG+YHP AAFPN+PTRR
Sbjct: 15 KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54