BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946783|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_L21, 5'
         (161 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido...    32   1.3  
sp|A2VE02|K1462_BOVIN Uncharacterized protein KIAA1462 homolog O...    29   8.4  

>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2
           OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
          Length = 629

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -3

Query: 147 PVGSPVQSAFAPCAQPSIRKHCGGGRR-----RSMQPLPLLQKYM 28
           P G PV S F P  QP  ++  GGGRR      S Q  P++Q+ M
Sbjct: 465 PGGGPVPSFFMPMVQPQ-QQRPGGGRRPGGIQHSQQQNPMMQQQM 508


>sp|A2VE02|K1462_BOVIN Uncharacterized protein KIAA1462 homolog
           OS=Bos taurus PE=2 SV=1
          Length = 1305

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 138 SPVQSAFAPCAQPSIRKHCGGGRRRSMQPL 49
           SP Q A  PC + ++ +H G GRR    P+
Sbjct: 351 SPPQPAAHPCPEEAVSRHEGRGRRVPQHPM 380

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946783|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_L21, 5'
         (161 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NWD3|A9NWD3_PICSI Putative uncharacterized protein OS=Picea...    33   5.4  

>tr|A9NWD3|A9NWD3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 88

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = +3

Query: 9   QVKMVRTYTFAAMVGVAYFAVSHLHNVFEWMA----ERKERKLTELESQQAIAKM 161
           + KMV+  TFAAM   A+  +  +  +  W+A    E++ER++ ELE    IAKM
Sbjct: 23  EAKMVKVSTFAAMTLGAFIFLQSVDKLHVWIALRQDEKRERQMQELE----IAKM 73