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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946791
Clone id YMU02A01NGRL0013_M06
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_M06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCA
TTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACG
ATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTG
TGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGG
GCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCT
AAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCACTG
GCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATACATAATGA
AACAACTTCCCAGTGGTGGCTT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 97
Score (bit) 140.0
E-value 3.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946791|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_M06, 5'
         (442 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   140   3e-33
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   139   7e-33
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   138   1e-32
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   136   3e-32
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   136   4e-32
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   135   6e-32
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   135   6e-32
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   135   6e-32
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   135   6e-32
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   135   6e-32
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   135   7e-32
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   135   7e-32
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   134   2e-31
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   133   3e-31
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   133   3e-31
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   133   3e-31
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha...   133   4e-31
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   132   6e-31
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   132   6e-31

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  140 bits (352), Expect = 3e-33
 Identities = 59/97 (60%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 182
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 183 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           ++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  139 bits (349), Expect = 7e-33
 Identities = 57/96 (59%), Positives = 74/96 (77%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 185
           EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL
Sbjct: 80  EQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVL 139

Query: 186 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           +E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 140 KEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  138 bits (347), Expect = 1e-32
 Identities = 60/98 (61%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   SEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 179
           SEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D++ 
Sbjct: 82  SEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQ 141

Query: 180 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 142 VLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  136 bits (343), Expect = 3e-32
 Identities = 58/99 (58%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   SEQIAKQVDFMVRKGWTPCIEFDKI-GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 179
           ++Q+A+QVD+++   W PC+EF+   G VYREH +  GYYDGRYW MWKLPMFGC D A 
Sbjct: 80  TDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQ 139

Query: 180 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
           VL E+ EC KEYP AFIR++GFD+ RQVQ   F+  KP+
Sbjct: 140 VLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPA 178


>sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1
          Length = 189

 Score =  136 bits (342), Expect = 4e-32
 Identities = 62/105 (59%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   SEQIAKQVDFMVRKGWTPCIEFDKIGS--VYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 176
           +EQ++K+ D+++R GW PC+EFD IGS  VYRE+    G+YDGRYW MWKLPMFGC D++
Sbjct: 82  NEQLSKECDYLLRNGWVPCVEFD-IGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSS 140

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV*TFL 311
            V++EI E  KEYP+AFIRV+GFD  RQVQ   F+  KP V  FL
Sbjct: 141 QVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPQVLLFL 185


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  135 bits (341), Expect = 6e-32
 Identities = 57/96 (59%), Positives = 74/96 (77%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 185
           EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFGC +A+ V+
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 186 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
            E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small chain
           3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2
           SV=1
          Length = 179

 Score =  135 bits (341), Expect = 6e-32
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 185
           E + KQ+++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA V+
Sbjct: 83  ESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVV 142

Query: 186 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           +E AEC KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 143 KEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178


>sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2
           SV=1
          Length = 179

 Score =  135 bits (341), Expect = 6e-32
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 185
           E + KQ+++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA V+
Sbjct: 83  ESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVV 142

Query: 186 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           +E AEC KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 143 KEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  135 bits (341), Expect = 6e-32
 Identities = 56/97 (57%), Positives = 72/97 (74%)
 Frame = +3

Query: 3   SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 182
           +E ++KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA  V
Sbjct: 69  TEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQV 128

Query: 183 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           L E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 129 LNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  135 bits (341), Expect = 6e-32
 Identities = 57/96 (59%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
 Frame = +3

Query: 9   QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 185
           ++AK+VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL
Sbjct: 80  ELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVL 139

Query: 186 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           +E+ EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 140 KEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 98
Score (bit) 191.0
E-value 2.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946791|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_M06, 5'
         (442 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   191   2e-47
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   143   5e-33
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   143   5e-33
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   142   8e-33
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   139   5e-32
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   139   7e-32
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   138   2e-31
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   136   5e-31
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   135   1e-30

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  191 bits (484), Expect = 2e-47
 Identities = 85/98 (86%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 182
           ++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +V
Sbjct: 76  NDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSV 135

Query: 183 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
           LREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 136 LREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  143 bits (360), Expect = 5e-33
 Identities = 64/100 (64%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 176
           +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A
Sbjct: 80  DQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
            VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 140 QVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  143 bits (360), Expect = 5e-33
 Identities = 64/100 (64%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 176
           +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A
Sbjct: 80  DQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
            VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 140 QVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  142 bits (358), Expect = 8e-33
 Identities = 59/97 (60%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 182
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 183 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           ++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  141 bits (356), Expect = 1e-32
 Identities = 62/100 (62%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 176
           +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 115 DQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 174

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
            VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 175 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  141 bits (356), Expect = 1e-32
 Identities = 62/100 (62%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 176
           +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 85  DQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 144

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
            VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 145 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  141 bits (355), Expect = 2e-32
 Identities = 59/97 (60%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 182
           EQ++K+VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D++ V
Sbjct: 82  EQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQV 141

Query: 183 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
           L+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 142 LKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  140 bits (352), Expect = 4e-32
 Identities = 61/100 (61%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 176
           ++IAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 84  DEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 143

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
            VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 144 QVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  139 bits (351), Expect = 5e-32
 Identities = 58/96 (60%), Positives = 74/96 (77%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 185
           + IAK++D+M++KGW PC+EFD++GSV REH    GYYDGRYW +WKLPMFGC D++ VL
Sbjct: 73  DSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVL 132

Query: 186 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 293
            EI EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 133 EEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  139 bits (350), Expect = 7e-32
 Identities = 61/100 (61%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
 Frame = +3

Query: 6   EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAA 176
           +QIA+QVD+M+++   PCIEFD +G+V R +F GSG   YYDGRYW MWKLPMFGC D++
Sbjct: 85  DQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSS 144

Query: 177 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 296
            VLREI EC   YP  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 145 QVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184