DK946797
Clone id YMU02A01NGRL0013_M12
Library
Length 500
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_M12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGCATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT
CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA
CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAAAAATCTATGGGTAGAC
GTCTAAGATAGCTGACACATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTT
GGAATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCC
CTCGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTTCCTGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q46I59
Definition sp|Q46I59|PURL_PROMT Phosphoribosylformylglycinamidine synthase 2 OS=Prochlorococcus marinus (strain NATL2A)
Align length 64
Score (bit) 30.4
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946797|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_M12, 5'
(470 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q46I59|PURL_PROMT Phosphoribosylformylglycinamidine synthase ... 30 4.1
sp|A2BZA6|PURL_PROM1 Phosphoribosylformylglycinamidine synthase ... 30 5.3
sp|Q5UQA3|YL533_MIMIV Uncharacterized protein L533 OS=Acanthamoe... 30 6.9

>sp|Q46I59|PURL_PROMT Phosphoribosylformylglycinamidine synthase 2
OS=Prochlorococcus marinus (strain NATL2A) GN=purL PE=3
SV=1
Length = 803

Score = 30.4 bits (67), Expect = 4.1
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1

Query: 217 IVLVPQEILGLISTSGEINKEKKNLWVDV*DS*HIVTKP--QRINLGKKVGINKSGFVKI 390
I + P ++G++ +INK K WV D ++ P IN +++ ++ S F++
Sbjct: 590 IPIHPTPVIGMVGLIEDINKICKKSWVKAEDQIWMIGLPLENNINQDERISLSASSFLEY 649

Query: 391 IEHL 402
I L
Sbjct: 650 IHGL 653


>sp|A2BZA6|PURL_PROM1 Phosphoribosylformylglycinamidine synthase 2
OS=Prochlorococcus marinus (strain NATL1A) GN=purL PE=3
SV=1
Length = 803

Score = 30.0 bits (66), Expect = 5.3
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1

Query: 229 PQEILGLISTSGEINKEKKNLWVDV*DS*HIVTKP--QRINLGKKVGINKSGFVKIIEHL 402
P ++G++ +INK K WV D ++ P IN +++ ++ S F++ I L
Sbjct: 594 PTPVIGMVGLIEDINKICKKSWVKAEDQIWMIGLPLENNINQDERISLSASSFLEYIHGL 653


>sp|Q5UQA3|YL533_MIMIV Uncharacterized protein L533 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L533 PE=1 SV=1
Length = 508

Score = 29.6 bits (65), Expect = 6.9
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1

Query: 142 PKLEVD*SISSLIHFKN*GR**RSRIVLVPQEILGLISTSGEINKEKKNLWVDV*DS 312
PK+ VD S S + HFK R ++ + + G IS I K+K +W D D+
Sbjct: 422 PKVNVD-SFSKVNHFK------RPITTIIKRIVYGFISYRCRIYKDKSTIWTDKLDN 471


tr_hit_id A6D2J9
Definition tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length 50
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946797|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_M12, 5'
(470 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.9

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -1

Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEMRSLNYQNHCET 39
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283