DK946803
Clone id YMU02A01NGRL0013_M18
Library
Length 158
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_M18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCGGGTTCAAGTCCCGGCAACGGAACCATTCATTCTCACTCCAGCAGAACCTGAGCAACC
TGGGAACATGGAAACTGGAATTGTAATGCTTACAACAGAAAATATAAATAAGCTTTTTGA
TAAGAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q1RMB5
Definition sp|Q1RMB5|K1644_DANRE Uncharacterized protein KIAA1644 homolog OS=Danio rerio
Align length 34
Score (bit) 29.6
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946803|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_M18, 5'
(114 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1RMB5|K1644_DANRE Uncharacterized protein KIAA1644 homolog O... 30 5.0

>sp|Q1RMB5|K1644_DANRE Uncharacterized protein KIAA1644 homolog
OS=Danio rerio GN=si:dkey-14k9.2 PE=2 SV=2
Length = 203

Score = 29.6 bits (65), Expect = 5.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3

Query: 106 YIFCCKHYNSSFHVPRLLRFCWSENEWFRCRDLN 5
YIFCC H N++F ++C +E E+ LN
Sbjct: 56 YIFCCHHNNTAF------KYCCNETEFQSVMQLN 83


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946803|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_M18, 5'
(114 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******