DK946818 |
Clone id |
YMU02A01NGRL0013_N10 |
Library |
YMU02 |
Length |
608 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_N10. 5' end sequence. |
Accession |
DK946818 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL36Contig1 |
Sequence |
GGATGAGTTTCCCTTTTGTGTGCACCTTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGA AGGCCTGGAGGCAGCTCGTATTGCTTGCAACAAATACATGACAAAATTTGCTGGAAAGGA TGCTTTTCATCTACGAGTTCGCGTGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCT TTCATGTGCCGGAACTGATAGGCTCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCA GGGCACTTGTGCGCGAGTTGACATTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAA TAATGGTATACATGCCCAGGAGGCCTTGCGTCGCGCTAAGTTCAAATTTCCTGGAAGGCA GAAGATTATTGTGAGCCGAAAATGGGGATTCACCAAATTTTCTCGAACTGACTACTTGAA GTGGAAGGAAGAGAACAGAATTGTTAATGATGGTGTCAATGCCAAGCTTCTTGGATGCCA TGGATTGCTTTCTGCAAGGAAGCCAGGAAGAGCGTTTCTGTCAGCTGCTGTTTCTGCATG AAATGTCTGTACTCTGGGAATGACAATATAAGCCTGAACGCCGATGCAAAAAAAAAAAAA AAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
175 |
Score (bit) |
326.0 |
E-value |
6.0e-89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
179 |
Score (bit) |
338.0 |
E-value |
1.0e-91 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946818|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_N10, 5' (587 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 338 1e-91 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 336 7e-91 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 332 9e-90 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 332 1e-89 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 332 1e-89 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 331 2e-89 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 331 2e-89 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 330 4e-89 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 330 4e-89 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 329 6e-89 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 325 2e-87 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 323 4e-87 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 322 1e-86 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 321 2e-86 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 320 3e-86 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 318 1e-85 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 318 1e-85 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 318 1e-85 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 318 2e-85 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 316 7e-85 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 315 9e-85 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 310 3e-83 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 309 7e-83 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 308 1e-82 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 304 2e-81 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 285 1e-75 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 284 2e-75 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 283 5e-75 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 283 5e-75 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 280 4e-74
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 338 bits (867), Expect = 1e-91 Identities = 162/179 (90%), Positives = 169/179 (94%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFPFCVHLVSWEKENVSSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVSA 538 KIIVSRKWGFTKFSR DY+KWK+ENRI+ DGVNAKLLGCHG L+ R+PGRAFLS AV + Sbjct: 164 KIIVSRKWGFTKFSRADYVKWKQENRIMPDGVNAKLLGCHGPLAQRQPGRAFLSGAVES 222
>tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 336 bits (861), Expect = 7e-91 Identities = 161/178 (90%), Positives = 169/178 (94%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFPFCVHLVSWEKENVSSE LEAARIACNKYM K+AGKDAFHLR+RVHPFHVLRINKML Sbjct: 44 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRMRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+N HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGTCARVMIGQVLLSVRCKDSNSNHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 535 KIIVSRKWGFTKFSRTDYLKWK ENRI+ DGVNAKLLGCHG L+AR+PG+AFLSAAV+ Sbjct: 164 KIIVSRKWGFTKFSRTDYLKWKSENRIIPDGVNAKLLGCHGPLAARQPGKAFLSAAVT 221
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 332 bits (851), Expect = 9e-90 Identities = 157/178 (88%), Positives = 166/178 (93%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFP+CVHLVSWEKENVSSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 535 KIIVSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 164 KIIVSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLAQRSAGRAFIDAAVA 221
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 332 bits (850), Expect = 1e-89 Identities = 157/178 (88%), Positives = 166/178 (93%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFP+CVHLVSWEKENVSSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 535 KIIVSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 164 KIIVSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLANRSAGRAFIDAAVA 221
>tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111565 PE=4 SV=1 Length = 219
Score = 332 bits (850), Expect = 1e-89 Identities = 157/178 (88%), Positives = 166/178 (93%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFP+CVHLVSWEKENVSSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKML Sbjct: 40 DEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKML 99
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQ Sbjct: 100 SCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQ 159
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 535 KIIVSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 160 KIIVSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLANRSAGRAFIDAAVA 217
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 331 bits (849), Expect = 2e-89 Identities = 158/178 (88%), Positives = 165/178 (92%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFPFCVHLVSWEKENVSSE LEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGTCARVMIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 535 KII+SRKWGFTKF+RTDYL+WK ENRIV DGVNAKLLGCHG LSAR+PGRAFL ++ Sbjct: 164 KIIISRKWGFTKFNRTDYLRWKSENRIVPDGVNAKLLGCHGRLSARQPGRAFLPPTIA 221
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 331 bits (848), Expect = 2e-89 Identities = 157/178 (88%), Positives = 165/178 (92%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFP+CVHLVSWEKENVSSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 535 KIIVSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L R GRAF+ AAV+ Sbjct: 164 KIIVSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLGNRTAGRAFIDAAVA 221
>tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lycopersicum GN=ACI29 PE=2 SV=1 Length = 220
Score = 330 bits (846), Expect = 4e-89 Identities = 161/176 (91%), Positives = 164/176 (93%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFPFCVHLVSWEKENVSSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAA 529 KIIVSRKWGFTKFSRTDYLK+K ENRIV DGVNAKLLGCHG L+AR+PGRAFL AA Sbjct: 164 KIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEAA 219
>tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 220
Score = 330 bits (846), Expect = 4e-89 Identities = 161/176 (91%), Positives = 164/176 (93%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFPFCVHLVSWEKENVSSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKML Sbjct: 44 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKML 103
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQ Sbjct: 104 SCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPGRQ 163
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAA 529 KIIVSRKWGFTKFSRTDYLK+K ENRIV DGVNAKLLGCHG L+AR+PGRAFL AA Sbjct: 164 KIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEAA 219
>tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023920001 PE=4 SV=1 Length = 231
Score = 329 bits (844), Expect = 6e-89 Identities = 156/175 (89%), Positives = 165/175 (94%) Frame = +2
Query: 2 DEFPFCVHLVSWEKENVSSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKML 181 DEFPFCVHLVSWEKENVSSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKML Sbjct: 55 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKML 114
Query: 182 SCAGTDRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQ 361 SCAG DRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQ Sbjct: 115 SCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQ 174
Query: 362 KIIVSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSA 526 KIIVSRKWGFTKF+RTDY+KWK ENRI+ DGVNAKLLGCHG L+ R+PG+AF++A Sbjct: 175 KIIVSRKWGFTKFNRTDYIKWKSENRILPDGVNAKLLGCHGPLANRQPGKAFINA 229
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