DK946830 |
Clone id |
YMU02A01NGRL0013_O02 |
Library |
YMU02 |
Length |
572 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_O02. 5' end sequence. |
Accession |
DK946830 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL30Contig1 |
Sequence |
GTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGTTGATGCAGTTGAGAAGGCTAAC TCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGATGGGCCACATTCTGTATGACGAG ATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAATCGCGACAGATTCGTCCTTTCT GCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCATCTTGCCGGCTACGACAGCGTC CAGGAGGAAGATCTGAAGCAATTCAGGCAATGGGAGAGCCGAACTCCTGGGCATCCTGAA AACTTTGAGACGCCTGGTGTGGAGGTTACTACAGGGCCCCTTGGCCAAGGTATTTGCAAT GCCGTTGGATTAGCTCTGGCCGAGAAGCACCTGGCTGCCCGCTTCAACAAGCCAGATGCC ACTGTTGTGGATCACTACACGTACTGTATTGTGGGAGATGGGTGCAACATGGAGGGCGTG TCAAATGAAGCATGCTCTCTTGCGGGACACTGGGGTCTTGGAAAGCTGATTGCTTTCTAT GACGACAACCATATTTCTATTGATGGTGATAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
185 |
Score (bit) |
373.0 |
E-value |
1.0e-103 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946830|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_O02, 5' (557 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 373 e-103 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 369 e-102 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 368 e-102 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 348 1e-95 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 325 7e-89 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 315 1e-85 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 249 5e-66 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 249 5e-66 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 246 7e-65 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 243 4e-64 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 242 8e-64 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 242 8e-64 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 242 8e-64 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 241 1e-63 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 241 2e-63 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 240 3e-63 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 240 3e-63 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 240 3e-63 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 240 3e-63 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 240 4e-63 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 239 7e-63 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 239 9e-63 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 238 1e-62 sp|P21726|TKTP_RALEH Transketolase, plasmid OS=Ralstonia eutroph... 236 4e-62 sp|P21725|TKTC_RALEH Transketolase, chromosomal OS=Ralstonia eut... 236 4e-62 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 236 6e-62 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 236 6e-62 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 236 6e-62 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 236 6e-62 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 236 7e-62
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 373 bits (958), Expect = e-103 Identities = 169/185 (91%), Positives = 180/185 (97%) Frame = +1
Query: 1 VEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS 180 +EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVLS Sbjct: 16 LEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLS 75
Query: 181 AGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICN 360 AGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLGQGI N Sbjct: 76 AGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIAN 135
Query: 361 AVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFY 540 AVGLALAEKHLAARFNKPD+ +VDHYTY I+GDGC MEG++NEACSLAGHWGLGKLIAFY Sbjct: 136 AVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFY 195
Query: 541 DDNHI 555 DDNHI Sbjct: 196 DDNHI 200
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 369 bits (948), Expect = e-102 Identities = 168/185 (90%), Positives = 177/185 (95%) Frame = +1
Query: 1 VEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS 180 VEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLS Sbjct: 81 VEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLS 140
Query: 181 AGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICN 360 AGHGCMLQYALLHLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLGQGI N Sbjct: 141 AGHGCMLQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLGQGIAN 200
Query: 361 AVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFY 540 AVGLA+AEKHLAARFNKPDA +VDHYTY I+GDGC MEG+SNE CSLAGHWGLGKLIAFY Sbjct: 201 AVGLAVAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGISNEVCSLAGHWGLGKLIAFY 260
Query: 541 DDNHI 555 DDNHI Sbjct: 261 DDNHI 265
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 368 bits (945), Expect = e-102 Identities = 170/185 (91%), Positives = 176/185 (95%) Frame = +1
Query: 1 VEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS 180 VEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS Sbjct: 81 VEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS 140
Query: 181 AGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICN 360 AGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPLGQGI N Sbjct: 141 AGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPLGQGIAN 200
Query: 361 AVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFY 540 AVGLALAEKHLAARFNKPDA +VDHYTY I+GDGC MEG++ EACSLAGHWGLGKLIAFY Sbjct: 201 AVGLALAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGIAQEACSLAGHWGLGKLIAFY 260
Query: 541 DDNHI 555 DDNHI Sbjct: 261 DDNHI 265
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 348 bits (892), Expect = 1e-95 Identities = 158/185 (85%), Positives = 170/185 (91%) Frame = +1
Query: 1 VEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS 180 V KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVLS Sbjct: 14 VSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVLS 73
Query: 181 AGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICN 360 AGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLGQGI + Sbjct: 74 AGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIAS 133
Query: 361 AVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFY 540 AVGLA+AEKHLAAR+NKP +VDHYTY I+GDGC MEGVSNEACSLA HWGLGKLIA Y Sbjct: 134 AVGLAVAEKHLAARYNKPGFEIVDHYTYVILGDGCQMEGVSNEACSLAAHWGLGKLIALY 193
Query: 541 DDNHI 555 DDNHI Sbjct: 194 DDNHI 198
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 325 bits (834), Expect = 7e-89 Identities = 148/185 (80%), Positives = 163/185 (88%) Frame = +1
Query: 1 VEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLS 180 V KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVLS Sbjct: 18 VVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVLS 77
Query: 181 AGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICN 360 AGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLGQG+ + Sbjct: 78 AGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVGS 137
Query: 361 AVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFY 540 AVGLALAEKHL AR+NKPD +VDHYTY I+GDGC MEG+SNEA SLA HWGLGKLIA Y Sbjct: 138 AVGLALAEKHLGARYNKPDFEMVDHYTYMILGDGCQMEGISNEASSLAAHWGLGKLIALY 197
Query: 541 DDNHI 555 DDNHI Sbjct: 198 DDNHI 202
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 315 bits (807), Expect = 1e-85 Identities = 148/184 (80%), Positives = 159/184 (86%) Frame = +1
Query: 4 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 183 E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFVLSA Sbjct: 10 ELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFVLSA 69
Query: 184 GHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNA 363 GHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLGQGI N Sbjct: 70 GHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGIANG 129
Query: 364 VGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYD 543 VGLA+AE HLAA+FNKPDA +VDHYTY I+GDGCNMEGVS EA S AGH GLGKLIA YD Sbjct: 130 VGLAIAEAHLAAKFNKPDAKIVDHYTYVILGDGCNMEGVSGEAASFAGHLGLGKLIALYD 189
Query: 544 DNHI 555 DNHI Sbjct: 190 DNHI 193
>sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1 Length = 668
Score = 249 bits (637), Expect = 5e-66 Identities = 118/180 (65%), Positives = 144/180 (80%) Frame = +1
Query: 16 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 195 N IRFL++DAV+KA SGHPG PMG A + +L+ + +++NP NP+W +RDRF+LS GHG Sbjct: 9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGS 68
Query: 196 MLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 375 ML Y+LLHL+GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG A Sbjct: 69 MLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFA 127
Query: 376 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDNHI 555 +AEK LA +FN+P +VDH+TY +GDGC MEG+S+EACSLAG GLGKLIAFYDDN+I Sbjct: 128 IAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNNI 187
>sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1 Length = 668
Score = 249 bits (637), Expect = 5e-66 Identities = 118/180 (65%), Positives = 144/180 (80%) Frame = +1
Query: 16 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 195 N IRFL++DAV+KA SGHPG PMG A + +L+ + +++NP NP+W +RDRF+LS GHG Sbjct: 9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGS 68
Query: 196 MLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 375 ML Y+LLHL+GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG A Sbjct: 69 MLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFA 127
Query: 376 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDNHI 555 +AEK LA +FN+P +VDH+TY +GDGC MEG+S+EACSLAG GLGKLIAFYDDN+I Sbjct: 128 IAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNNI 187
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 246 bits (627), Expect = 7e-65 Identities = 117/182 (64%), Positives = 140/182 (76%) Frame = +1
Query: 10 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 189 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 190 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVG 369 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLGQG+ AVG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVG 127
Query: 370 LALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDN 549 +A+AE+HLAA +N+ +VDHYTY I GDG MEGVS EA SLAGH LG++I YD N Sbjct: 128 MAMAERHLAATYNRDGYNIVDHYTYTICGDGDLMEGVSAEAASLAGHLKLGRMILLYDSN 187
Query: 550 HI 555 I Sbjct: 188 DI 189
>sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1 Length = 665
Score = 243 bits (621), Expect = 4e-64 Identities = 117/180 (65%), Positives = 141/180 (78%) Frame = +1
Query: 16 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 195 N IR LA+D+V+KA SGHPG PMG A + +L+ + +++NP NP W +RDRFVLS GHG Sbjct: 9 NAIRVLAMDSVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPTNPKWADRDRFVLSNGHGS 68
Query: 196 MLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 375 ML Y+LLHL GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG+A Sbjct: 69 MLIYSLLHLTGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGMA 127
Query: 376 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDNHI 555 +AEK LA +FN+ +VDH+TY +GDGC MEG+S+EACSLAG GLGKLIAFYDDN+I Sbjct: 128 IAEKTLAGQFNREGHEIVDHHTYVFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNNI 187
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84ZY2 |
Definition |
tr|Q84ZY2|Q84ZY2_ORYSJ Putative transketolase OS=Oryza sativa subsp. japonica |
Align length |
185 |
Score (bit) |
375.0 |
E-value |
1.0e-102 |
Report |
|