| DK946839 |
| Clone id |
YMU02A01NGRL0013_O16 |
| Library |
YMU02 |
| Length |
594 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_O16. 5' end sequence. |
| Accession |
DK946839 |
| Tissue type |
young leaves |
| Developmental stage |
sporophyte |
| Contig ID |
CL4179Contig1 |
| Sequence |
GAATGCGCAGGCTTTCCCCTACCGTTCTGACTCTGGTGGAGGAAGAGCTGGGTTGCAGCG CTATGGCAGTCGTTTCTTATTTCTTTGAAGCTCTGCATCACTACTCAGCGATCTGTGATT CTCTTGAGGCTTGTCTCTTGAGCGAAACAGTTGCTCGGATGCTTGTGGAGCGCGTCTTTC TTGCACCTCGGATCAACAGTACCGTGATGTTTTGGAGTGGATCCTCGGCCCAGACTGAGC TTGGGACAGATTTTGCGACATACAACTGGTGCTCACTTGTTCGCTCTGTGGGATTCAAGT CTCTTCCCTTGTCATTTCAGAACCTCTCCCAAGCGAGGCTACTACTTGGGCTATACAAGG ATGGTTTCAAGCTTGACGAAAGGAGTAACCGCCTGCTTTTGGGGTGGCGTGCAAAGCCCT TGTTTGCTGCCTCCGTGTGGAACTGATGCTAGGAAGCTTGTTCTGGGCATAAAATGATTT CCAGACATTGGAGTTCTCCTTGGTACATTATCAATAACTGCTGCAATTACAACTTTGTGG ATAGTGCTGCTATTTTGCCCCATGGTTTGGATTTCTTGCCAAGACTGCCCTTGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q5NE24 |
| Definition |
sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein OS=Medicago truncatula |
| Align length |
148 |
| Score (bit) |
112.0 |
| E-value |
1.0e-24 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946839|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_O16, 5' (594 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein OS=M... 112 1e-24 sp|Q9SUF5|SCL26_ARATH Scarecrow-like protein 26 OS=Arabidopsis t... 98 3e-20 sp|Q2Z2E9|SCR_IPONI Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1... 82 2e-15 sp|Q9M384|SCR_ARATH Protein SCARECROW OS=Arabidopsis thaliana GN... 80 8e-15 sp|Q9FUZ7|SCR_MAIZE Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1 79 2e-14 sp|Q9AVK4|SCR_PEA Protein SCARECROW OS=Pisum sativum GN=SCR PE=2... 79 2e-14 sp|Q2QYF3|SCR2_ORYSJ Protein SCARECROW 2 OS=Oryza sativa subsp. ... 78 3e-14 sp|A2ZHL0|SCR2_ORYSI Protein SCARECROW 2 OS=Oryza sativa subsp. ... 78 3e-14 sp|A2ZAX5|SCR1_ORYSI Protein SCARECROW 1 OS=Oryza sativa subsp. ... 78 3e-14 sp|Q2RB59|SCR1_ORYSJ Protein SCARECROW 1 OS=Oryza sativa subsp. ... 77 5e-14 sp|Q69VG1|CIGR1_ORYSJ Chitin-inducible gibberellin-responsive pr... 77 8e-14 sp|Q8S4W7|GAI1_VITVI DELLA protein GAI1 OS=Vitis vinifera GN=GAI... 75 2e-13 sp|Q8GXW1|RGL2_ARATH DELLA protein RGL2 OS=Arabidopsis thaliana ... 75 2e-13 sp|Q9ZWC5|SCL18_ARATH Scarecrow-like protein 18 OS=Arabidopsis t... 75 3e-13 sp|Q9FHZ1|SCL23_ARATH Scarecrow-like protein 23 OS=Arabidopsis t... 74 6e-13 sp|Q8GVE1|CIGR2_ORYSJ Chitin-inducible gibberellin-responsive pr... 72 2e-12 sp|Q9LF53|RGL3_ARATH DELLA protein RGL3 OS=Arabidopsis thaliana ... 71 4e-12 sp|Q7Y1B6|GAI_SOLLC DELLA protein GAI OS=Solanum lycopersicum GN... 71 5e-12 sp|Q6EI06|GAIP_CUCMA DELLA protein GAIP OS=Cucurbita maxima GN=G... 70 6e-12 sp|Q9C8Y3|RGL1_ARATH DELLA protein RGL1 OS=Arabidopsis thaliana ... 69 1e-11 sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5 OS=Arabidopsis tha... 69 2e-11 sp|Q5BN22|RGA2_BRACM DELLA protein RGA2 OS=Brassica campestris G... 67 9e-11 sp|Q6EI05|GAIPB_CUCMA DELLA protein GAIP-B OS=Cucurbita maxima G... 67 9e-11 sp|Q84MM9|MOC_ORYSJ Protein MONOCULM 1 OS=Oryza sativa subsp. ja... 66 1e-10 sp|Q9LDL7|PAT1_ARATH Scarecrow-like transcription factor PAT1 OS... 65 2e-10 sp|Q8W127|SLN1_HORVU DELLA protein SLN1 OS=Hordeum vulgare GN=SL... 65 3e-10 sp|Q9LQT8|GAI_ARATH DELLA protein GAI OS=Arabidopsis thaliana GN... 65 3e-10 sp|Q9ST59|RHT1_WHEAT DELLA protein RHT-1 OS=Triticum aestivum GN... 64 4e-10 sp|Q84TQ7|GAI_GOSHI DELLA protein GAI OS=Gossypium hirsutum GN=G... 64 6e-10 sp|Q5BN23|RGA1_BRACM DELLA protein RGA1 OS=Brassica campestris G... 63 1e-09
>sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1 Length = 508
Score = 112 bits (281), Expect = 1e-24 Identities = 63/148 (42%), Positives = 94/148 (63%), Gaps = 3/148 (2%) Frame = +3
Query: 6 RRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFLA 185 + L+P ++TLVEEE+G V F ++LHHYSA+ DSLEA + AR LVERVF Sbjct: 358 KTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARTLVERVFFG 417
Query: 186 PRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLYKDG 365 PRI ++ G +T G + +W + VGF+ +P+SF N QA+LLLGL+ DG Sbjct: 418 PRIAGSL----GRIYRT--GGEEERRSWGEWLGEVGFRGVPVSFANHCQAKLLLGLFNDG 471
Query: 366 FKLDE---RSNRLLLGWRAKPLFAASVW 440 ++++E SN+L+L W+++ L +AS+W Sbjct: 472 YRVEEVGVGSNKLVLDWKSRRLLSASLW 499
>sp|Q9SUF5|SCL26_ARATH Scarecrow-like protein 26 OS=Arabidopsis thaliana GN=SCL26 PE=2 SV=1 Length = 483
Score = 98.2 bits (243), Expect = 3e-20 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 2/150 (1%) Frame = +3
Query: 6 RRLSPTVLTLVEEELGCSAMAVVSY-FFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 + L+P ++TLV EE+G Y F + LH +SAI DSLEA L AR VERVF+ Sbjct: 335 KTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFI 394
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLYKD 362 P + + + + + A+ E FA+ W + + GFK L +SF N QA+LLL L+ D Sbjct: 395 GPWVANWLTRITANDAEVE---SFAS--WPQWLETNGFKPLEVSFTNRCQAKLLLSLFND 449
Query: 363 GFKLDE-RSNRLLLGWRAKPLFAASVWN*C 449 GF+++E N L+LGW+++ L +AS W C Sbjct: 450 GFRVEELGQNGLVLGWKSRRLVSASFWASC 479
>sp|Q2Z2E9|SCR_IPONI Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1 Length = 783
Score = 82.4 bits (202), Expect = 2e-15 Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L A + + F EA+H+YSA+ DSL AC E+ R VE+ L Sbjct: 636 LQRLAPKVVTVVEQDLS-HAGSFLGRFVEAIHYYSALFDSLGACYGEESEERHAVEQQLL 694
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + V+ G S E+ + NW + GF+ + L+ +QA LLLG++ Sbjct: 695 SREIRN-VLAVGGPSRSGEVKFN----NWREKFQQSGFRGVSLAGNAAAQATLLLGMFHS 749
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L E + L LGW+ L AS W Sbjct: 750 DGYTLAEDNGALKLGWKDLCLLTASAW 776
>sp|Q9M384|SCR_ARATH Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1 Length = 653
Score = 80.1 bits (196), Expect = 8e-15 Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L A + + F EA+H+YSA+ DSL A E+ R +VE+ L Sbjct: 509 LQRLAPKVVTVVEQDLS-HAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLL 567
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + V+ G S E+ + +W ++ GFK + L+ +QA LLLG++ Sbjct: 568 SKEIRN-VLAVGGPSRSGEVKFE----SWREKMQQCGFKGISLAGNAATQATLLLGMFPS 622
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L + + L LGW+ L AS W Sbjct: 623 DGYTLVDDNGTLKLGWKDLSLLTASAW 649
>sp|Q9FUZ7|SCR_MAIZE Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1 Length = 668
Score = 79.0 bits (193), Expect = 2e-14 Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L S + ++ F EA+H+YSA+ DSL+A ++ R +VE+ L Sbjct: 519 IQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLL 577
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + + G A+T D +W + GF++ L+ +QA LLLG++ Sbjct: 578 SREIRNVLAV--GGPART---GDVKFGSWREKLAQSGFRAASLAGSAAAQASLLLGMFPS 632
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L E + L LGW+ L AS W Sbjct: 633 DGYTLVEENGALKLGWKDLCLLTASAW 659
>sp|Q9AVK4|SCR_PEA Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1 Length = 819
Score = 78.6 bits (192), Expect = 2e-14 Identities = 51/147 (34%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L +A + + F EA+H+YSA+ DSL + E+ R +VE+ L Sbjct: 665 LQRLAPKVVTVVEQDLS-NAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLL 723
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + V+ G S E+ +NW ++ GF+ + L+ +QA LLLG++ Sbjct: 724 SREIRN-VLAVGGPSRSGEI----KFHNWREKLQQCGFRGVSLAGNAATQASLLLGMFPS 778
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 +G+ L E + L LGW+ L AS W Sbjct: 779 EGYTLVEDNGILKLGWKDLCLLTASAW 805
>sp|Q2QYF3|SCR2_ORYSJ Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1 Length = 660
Score = 78.2 bits (191), Expect = 3e-14 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L S + ++ F EA+H+YSA+ DSL+A ++ R +VE+ L Sbjct: 512 IQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLL 570
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + + G A+T D +W + GF+ L+ +QA LLLG++ Sbjct: 571 SREIRNVLAV--GGPART---GDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPS 625
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L E + L LGW+ L AS W Sbjct: 626 DGYTLIEENGALKLGWKDLCLLTASAW 652
>sp|A2ZHL0|SCR2_ORYSI Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2 Length = 660
Score = 78.2 bits (191), Expect = 3e-14 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L S + ++ F EA+H+YSA+ DSL+A ++ R +VE+ L Sbjct: 512 IQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLL 570
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + + G A+T D +W + GF+ L+ +QA LLLG++ Sbjct: 571 SREIRNVLAV--GGPART---GDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPS 625
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L E + L LGW+ L AS W Sbjct: 626 DGYTLIEENGALKLGWKDLCLLTASAW 652
>sp|A2ZAX5|SCR1_ORYSI Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2 Length = 659
Score = 78.2 bits (191), Expect = 3e-14 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L S + ++ F EA+H+YSA+ DSL+A ++ R +VE+ L Sbjct: 511 IQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLL 569
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + + G A+T D +W + GF+ L+ +QA LLLG++ Sbjct: 570 SREIRNVLAV--GGPART---GDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPS 624
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L E + L LGW+ L AS W Sbjct: 625 DGYTLIEENGALKLGWKDLCLLTASAW 651
>sp|Q2RB59|SCR1_ORYSJ Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1 Length = 651
Score = 77.4 bits (189), Expect = 5e-14 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 1/147 (0%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 ++RL+P V+T+VE++L S + ++ F EA+H+YSA+ DSL+A ++ R +VE+ L Sbjct: 503 IQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLL 561
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-K 359 + I + + G A+T D +W + GF+ L+ +QA LLLG++ Sbjct: 562 SREIRNVLAV--GGPART---GDVKFGSWREKLAQSGFRVSSLAGSAAAQAVLLLGMFPS 616
Query: 360 DGFKLDERSNRLLLGWRAKPLFAASVW 440 DG+ L E + L LGW+ L AS W Sbjct: 617 DGYTLIEENGALKLGWKDLCLLTASAW 643
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q5NE23 |
| Definition |
tr|Q5NE23|Q5NE23_PEA GRAS family protein OS=Pisum sativum |
| Align length |
150 |
| Score (bit) |
112.0 |
| E-value |
1.0e-23 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946839|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_O16, 5' (594 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5NE23|Q5NE23_PEA GRAS family protein OS=Pisum sativum GN=sym... 112 1e-23 tr|A7NVA0|A7NVA0_VITVI Chromosome chr18 scaffold_1, whole genome... 110 8e-23 tr|A5BT75|A5BT75_VITVI Putative uncharacterized protein OS=Vitis... 108 2e-22 tr|Q2PEG7|Q2PEG7_LOTJA Transcription initiator for nodulation (N... 103 6e-21 tr|Q2R3Q8|Q2R3Q8_ORYSJ GRAS family transcription factor containi... 100 6e-20 tr|B8BKN5|B8BKN5_ORYSI Putative uncharacterized protein OS=Oryza... 100 6e-20 tr|A3CBL6|A3CBL6_ORYSJ Putative uncharacterized protein OS=Oryza... 100 6e-20 tr|Q84Q92|Q84Q92_ORYSJ Putative uncharacterized protein OJ1041F0... 97 7e-19 tr|A3AGB0|A3AGB0_ORYSJ Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|A2XET2|A2XET2_ORYSI Putative uncharacterized protein OS=Oryza... 97 9e-19 tr|A7P9Y5|A7P9Y5_VITVI Chromosome chr14 scaffold_9, whole genome... 91 6e-17 tr|A9RMC9|A9RMC9_PHYPA Predicted protein OS=Physcomitrella paten... 87 7e-16 tr|A9LY09|A9LY09_9TRAC Putative DELLA protein OS=Selaginella moe... 86 2e-15 tr|A5B006|A5B006_VITVI Putative uncharacterized protein (Chromos... 84 6e-15 tr|A7U4T4|A7U4T4_SPHPA DELLA protein OS=Sphagnum palustre GN=DEL... 84 8e-15 tr|Q0MRQ2|Q0MRQ2_PINSY SCARECROW OS=Pinus sylvestris GN=SCR1 PE=... 83 1e-14 tr|A9RJ64|A9RJ64_PHYPA GAI1-like E3 ubiquitin ligase protein OS=... 82 2e-14 tr|A7U4T7|A7U4T7_PHYPA DELLA protein OS=Physcomitrella patens GN... 82 2e-14 tr|A9T6T0|A9T6T0_PHYPA AtGAI1 GRAS E3 ubiquitin ligase protein O... 82 2e-14 tr|A7U4T6|A7U4T6_PHYPA DELLA protein OS=Physcomitrella patens GN... 82 2e-14 tr|A9RVV2|A9RVV2_PHYPA Predicted protein OS=Physcomitrella paten... 81 4e-14 tr|Q9ZSP2|Q9ZSP2_SOLLC Lateral suppressor protein OS=Solanum lyc... 80 1e-13 tr|Q5NDC9|Q5NDC9_CUCSA SCARECROW OS=Cucumis sativus GN=scr PE=2 ... 80 1e-13 tr|A7QBB4|A7QBB4_VITVI Chromosome chr4 scaffold_73, whole genome... 80 1e-13 tr|A2Q3V8|A2Q3V8_MEDTR Flagellar basal body rod protein; GRAS tr... 79 2e-13 tr|A7QZ32|A7QZ32_VITVI Chromosome chr17 scaffold_263, whole geno... 79 3e-13 tr|A7QQG0|A7QQG0_VITVI Chromosome undetermined scaffold_142, who... 79 3e-13 tr|A5AP43|A5AP43_VITVI Putative uncharacterized protein OS=Vitis... 79 3e-13 tr|B7FA13|B7FA13_ORYSJ cDNA, clone: J100030A12, full insert sequ... 78 3e-13 tr|A9RVU9|A9RVU9_PHYPA Predicted protein OS=Physcomitrella paten... 78 4e-13
>tr|Q5NE23|Q5NE23_PEA GRAS family protein OS=Pisum sativum GN=sym7 PE=4 SV=1 Length = 503
Score = 112 bits (281), Expect = 1e-23 Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Frame = +3
Query: 6 RRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFLA 185 + L+P ++TLVEEE G V F ++LHHYSA+ DSLEA + AR LVERVF Sbjct: 352 KALNPKLVTLVEEENGSVVGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFG 411
Query: 186 PRINSTV--MFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLYK 359 PRI ++ ++ +G + E +W + + GF+ +P+SF N QA+LLLGL+ Sbjct: 412 PRIAGSLGRIYRTGGDGEEE------RRSWGEWLGAAGFRGVPVSFANHCQAKLLLGLFN 465
Query: 360 DGFKLDE---RSNRLLLGWRAKPLFAASVW 440 DG++++E SN+L+L W+++ L +ASVW Sbjct: 466 DGYRVEEVGLGSNKLVLDWKSRRLLSASVW 495
>tr|A7NVA0|A7NVA0_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015355001 PE=4 SV=1 Length = 490
Score = 110 bits (274), Expect = 8e-23 Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 3/149 (2%) Frame = +3
Query: 6 RRLSPTVLTLVEEELGCSAMA-VVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 + L P ++TLVEEE+G + V F ++LHHYSA+ DSLEA + AR LVERVFL Sbjct: 341 KTLKPKLVTLVEEEVGPTGDGGFVGRFMDSLHHYSAVYDSLEAGFPMQGRARALVERVFL 400
Query: 183 APRINSTV-MFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLYK 359 PRI T+ + G Q E G +W + GF+ + +SF N QA+LLLGL+ Sbjct: 401 GPRIAGTLGRIYRGRGGQ-EGG------SWGEWLDGAGFRGVGISFANHCQAKLLLGLFN 453
Query: 360 DGFKLDE-RSNRLLLGWRAKPLFAASVWN 443 DG++++E +NR++LGW+++ L +ASVW+ Sbjct: 454 DGYRVEELANNRMVLGWKSRRLLSASVWS 482
>tr|A5BT75|A5BT75_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030382 PE=4 SV=1 Length = 490
Score = 108 bits (271), Expect = 2e-22 Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 3/149 (2%) Frame = +3
Query: 6 RRLSPTVLTLVEEELGCSA-MAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 + L P ++TLVEEE+G + V F ++LHHYSA+ DSLEA + AR LVERVFL Sbjct: 341 KTLKPKLVTLVEEEVGPTGDXGFVGRFMDSLHHYSAVYDSLEAGFPMQGRARALVERVFL 400
Query: 183 APRINSTV-MFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLYK 359 PRI T+ + G Q E G +W + GF+ + +SF N QA+LLLGL+ Sbjct: 401 GPRIAGTLGRIYRGRGGQ-EGG------SWGXWLEWGGFRGVGISFANHCQAKLLLGLFN 453
Query: 360 DGFKLDE-RSNRLLLGWRAKPLFAASVWN 443 DG++++E +NR++LGW+++ L +ASVW+ Sbjct: 454 DGYRVEELANNRMVLGWKSRRLLSASVWS 482
>tr|Q2PEG7|Q2PEG7_LOTJA Transcription initiator for nodulation (Nodulation signaling pathway 2) OS=Lotus japonicus GN=TINod PE=2 SV=1 Length = 499
Score = 103 bits (258), Expect = 6e-21 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%) Frame = +3
Query: 6 RRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFLA 185 + L P ++T+VEEE+G + V F ++LHH+SA+ DSLEA + AR LVERVFL Sbjct: 350 KALRPRLVTVVEEEVGSALGGFVERFMDSLHHFSAVFDSLEAGFPMQGRARALVERVFLG 409
Query: 186 PRI-NSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLYKD 362 PRI S + E G +W +R+ GF + +S N Q+ LLLGL+ D Sbjct: 410 PRIVGSLARIYRTGGGGEERG------SWREWLRAAGFSGVAVSSANHCQSNLLLGLFND 463
Query: 363 GFKLDE-RSNRLLLGWRAKPLFAASVW 440 G++++E SN+L+L W+ + L +AS+W Sbjct: 464 GYRVEELGSNKLVLHWKTRRLLSASLW 490
>tr|Q2R3Q8|Q2R3Q8_ORYSJ GRAS family transcription factor containing protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g31100 PE=4 SV=1 Length = 772
Score = 100 bits (249), Expect = 6e-20 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 2/148 (1%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 +R +P ++TLVE+E + + F EALH+YSAI DSL+A +E+ ARM VE+ L Sbjct: 627 IRDQAPKIITLVEQEAAHNGPYFLGRFLEALHYYSAIFDSLDATFPAESTARMKVEQCLL 686
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-- 356 AP I + V + W L+ GF+++PLS + Q+++LLGLY Sbjct: 687 APEIRNVV----ACEGAERVARHERLERWRRLMEGRGFEAVPLSAAAVGQSQVLLGLYGA 742
Query: 357 KDGFKLDERSNRLLLGWRAKPLFAASVW 440 DG++L E S LLLGW+ + + AAS W Sbjct: 743 GDGYRLTEDSGCLLLGWQDRAIIAASAW 770
>tr|B8BKN5|B8BKN5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36217 PE=4 SV=1 Length = 318
Score = 100 bits (249), Expect = 6e-20 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 2/148 (1%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 +R +P ++TLVE+E + + F EALH+YSAI DSL+A +E+ ARM VE+ L Sbjct: 173 IRDQAPKIITLVEQEAAHNGPYFLGRFLEALHYYSAIFDSLDATFPAESTARMKVEQCLL 232
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-- 356 AP I + V + W L+ GF+++PLS + Q+++LLGLY Sbjct: 233 APEIRNVV----ACEGAERVARHERLERWRRLMEGRGFEAVPLSAAAVGQSQVLLGLYGA 288
Query: 357 KDGFKLDERSNRLLLGWRAKPLFAASVW 440 DG++L E S LLLGW+ + + AAS W Sbjct: 289 GDGYRLTEDSGCLLLGWQDRAIIAASAW 316
>tr|A3CBL6|A3CBL6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032688 PE=4 SV=1 Length = 773
Score = 100 bits (249), Expect = 6e-20 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 2/148 (1%) Frame = +3
Query: 3 MRRLSPTVLTLVEEELGCSAMAVVSYFFEALHHYSAICDSLEACLLSETVARMLVERVFL 182 +R +P ++TLVE+E + + F EALH+YSAI DSL+A +E+ ARM VE+ L Sbjct: 628 IRDQAPKIITLVEQEAAHNGPYFLGRFLEALHYYSAIFDSLDATFPAESTARMKVEQCLL 687
Query: 183 APRINSTVMFWSGSSAQTELGTDFATYNWCSLVRSVGFKSLPLSFQNLSQARLLLGLY-- 356 AP I + V + W L+ GF+++PLS + Q+++LLGLY Sbjct: 688 APEIRNVV----ACEGAERVARHERLERWRRLMEGRGFEAVPLSAAAVGQSQVLLGLYGA 743
Query: 357 KDGFKLDERSNRLLLGWRAKPLFAASVW 440 DG++L E S LLLGW+ + + AAS W Sbjct: 744 GDGYRLTEDSGCLLLGWQDRAIIAASAW 771
>tr|Q84Q92|Q84Q92_ORYSJ Putative uncharacterized protein OJ1041F02.13 (GRAS family transcription factor containing protein) OS=Oryza sativa subsp. japonica GN=OJ1041F02.13 PE=4 SV=1 Length = 575
Score = 97.1 bits (240), Expect = 7e-19 Identities = 64/160 (40%), Positives = 89/160 (55%), Gaps = 14/160 (8%) Frame = +3
Query: 3 MRRLSPTVLTLVEEEL------------GCSAMAVVSYFFEALHHYSAICDSLEACLLSE 146 M L ++T+VEEE +A V F E LH YSA+ DSLEA ++ Sbjct: 373 MAALGAKLVTVVEEEGEAEKDDDGDSAGDAAAGGFVRQFMEELHRYSAVWDSLEAGFPTQ 432
Query: 147 TVARMLVERVFLAPRINSTVMFWSGSSAQTELGTD-FATYNWCSLVRSVGFKSLPLSFQN 323 + R LVERV LAP I +G+ ++ G D W +R GF ++PLS N Sbjct: 433 SRVRGLVERVILAPNI-------AGAVSRAYRGVDGEGRCGWGQWMRGSGFTAVPLSCFN 485
Query: 324 LSQARLLLGLYKDGFKLDERS-NRLLLGWRAKPLFAASVW 440 SQARLLLGL+ DG+ ++E N+++LGW+A+ L +ASVW Sbjct: 486 HSQARLLLGLFNDGYTVEETGPNKIVLGWKARRLMSASVW 525
>tr|A3AGB0|A3AGB0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009832 PE=4 SV=1 Length = 579
Score = 97.1 bits (240), Expect = 7e-19 Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 18/164 (10%) Frame = +3
Query: 3 MRRLSPTVLTLVEEE----------------LGCSAMAVVSYFFEALHHYSAICDSLEAC 134 M L ++T+VEEE +A V F E LH YSA+ DSLEA Sbjct: 373 MAALGAKLVTVVEEEGEAEKDDDGDSAGDAAAAAAAGGFVRQFMEELHRYSAVWDSLEAG 432
Query: 135 LLSETVARMLVERVFLAPRINSTVMFWSGSSAQTELGTD-FATYNWCSLVRSVGFKSLPL 311 +++ R LVERV LAP I +G+ ++ G D W +R GF ++PL Sbjct: 433 FPTQSRVRGLVERVILAPNI-------AGAVSRAYRGVDGEGRCGWGQWMRGSGFTAVPL 485
Query: 312 SFQNLSQARLLLGLYKDGFKLDERS-NRLLLGWRAKPLFAASVW 440 S N SQARLLLGL+ DG+ ++E N+++LGW+A+ L +ASVW Sbjct: 486 SCFNHSQARLLLGLFNDGYTVEETGPNKIVLGWKARRLMSASVW 529
>tr|A2XET2|A2XET2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10846 PE=4 SV=1 Length = 579
Score = 96.7 bits (239), Expect = 9e-19 Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 18/164 (10%) Frame = +3
Query: 3 MRRLSPTVLTLVEEE----------------LGCSAMAVVSYFFEALHHYSAICDSLEAC 134 M L ++T+VEEE +A V F E LH YSA+ DSLEA Sbjct: 373 MAALGAKLVTVVEEEGEAEKDDDGDSAGDAAAAAAAGGFVRRFMEELHRYSAVWDSLEAG 432
Query: 135 LLSETVARMLVERVFLAPRINSTVMFWSGSSAQTELGTD-FATYNWCSLVRSVGFKSLPL 311 +++ R LVERV LAP I +G+ ++ G D W +R GF ++PL Sbjct: 433 FPTQSRVRGLVERVILAPNI-------AGAVSRAYRGVDGEGRCGWGQWMRGSGFTAVPL 485
Query: 312 SFQNLSQARLLLGLYKDGFKLDERS-NRLLLGWRAKPLFAASVW 440 S N SQARLLLGL+ DG+ ++E N+++LGW+A+ L +ASVW Sbjct: 486 SCFNHSQARLLLGLFNDGYTVEETGPNKIVLGWKARRLMSASVW 529
|