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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946856
Clone id YMU02A01NGRL0013_P15
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_P15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGACTTGTGGACAGAATCGAGAGAGAGAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAA
TATATCAGTAGGTAGCAAGTAAGCAAGCACAAGCAGACTGTGCCGAACGTGATGGAGAAG
ATAGGCGAGATGCTGCACATGGGGGGTCATCGCAAAGAAGAAGAGCACCCAGCTCACCCA
CCACCGCAATATGCAAGATGAAGCACAAGATGAAGGGTGGCGACGATGACAGCAGCTCCA
GCAGCAGCGAAAGTGATGGGGAAGGAGGGCGCAGGAAGAAGAAACATGGCCTCTTCTAAG
CAACTTGCTCCTTGCTTGTTTTTGACATGATCTTGTGTTTGTATGTAATGTCGCTTTTCA
TCTCGGCTATATGAGATGGGTTCAAAATGTGGCTGCATATCGACCTACGTCATTTTCATT
TCACTATATATGGTATTATGAATAAAAAAAATGGCCTTGCAGCTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5QA93
Definition sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta
Align length 42
Score (bit) 30.8
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946856|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_P15, 5'
         (464 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HS...    31   3.0  
sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog O...    31   3.0  
sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota GN=...    30   6.7  
sp|A6NH21|SERC4_HUMAN Serine incorporator 4 OS=Homo sapiens GN=S...    29   8.7  
sp|Q9BYQ8|KRA49_HUMAN Keratin-associated protein 4-9 (Fragment) ...    29   8.7  

>sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HSV2
           PE=3 SV=1
          Length = 360

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 357 KATLHT-NTRSCQKQARSKLLRRGHVSSSCALLPHHFRCCWS 235
           K TLH  N  +   Q  S +  R H+ S+  L+P +FR  WS
Sbjct: 259 KNTLHVYNLTAADPQPESAMANRLHLLSAVPLMPTYFRSVWS 300


>sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog OS=Mus
            musculus PE=2 SV=2
          Length = 1889

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 99   CAERDGEDRRDAAHGGSSQRRRAPSSPTT 185
            C   DG+ R+DAA  GS +   A SSP T
Sbjct: 1515 CCTADGKQRQDAAQQGSPRASEATSSPQT 1543


>sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
           GN=ECPP44 PE=1 SV=1
          Length = 258

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +1

Query: 112 MEKIGEMLHMGGHRKEEEHPAHPPP 186
           MEKI E L  GG + EEE  A PPP
Sbjct: 142 MEKIKEKLPGGGKKVEEETVAPPPP 166


>sp|A6NH21|SERC4_HUMAN Serine incorporator 4 OS=Homo sapiens
           GN=SERINC4 PE=2 SV=1
          Length = 518

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 243 CWSCCHRRHPSSCASSC 193
           C SCCH R PS  AS+C
Sbjct: 43  CASCCHSRWPSLTASTC 59


>sp|Q9BYQ8|KRA49_HUMAN Keratin-associated protein 4-9 (Fragment)
           OS=Homo sapiens GN=KRTAP4-9 PE=2 SV=1
          Length = 191

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -3

Query: 279 SSCALLPHHFRCCWSCCHRRHPSSCASSC 193
           S C     H RCC S C R  PS C SSC
Sbjct: 89  SCCETTCCHPRCCISSCCR--PSCCVSSC 115
tr_hit_id Q941N0
Definition tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
Align length 28
Score (bit) 38.5
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946856|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_P15, 5'
         (464 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam ...    39   0.17 
tr|Q090K0|Q090K0_STIAU Putative uncharacterized protein OS=Stigm...    35   1.4  
tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max P...    35   1.8  
tr|B7Q5P8|B7Q5P8_IXOSC Putative uncharacterized protein (Fragmen...    35   2.4  
tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus...    34   3.1  
tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus mo...    34   4.1  
tr|B0D0Y0|B0D0Y0_LACBS Predicted protein OS=Laccaria bicolor (st...    33   5.4  
tr|Q7Y1A0|Q7Y1A0_SOLSG 25 kDa protein dehydrin OS=Solanum sogara...    33   7.0  
tr|Q68YT2|Q68YT2_VACCO Dehydrin COR11 OS=Vaccinium corymbosum GN...    33   9.1  
tr|B7U4B1|B7U4B1_VACVI Dehydrin COR11 OS=Vaccinium vitis-idaea P...    33   9.1  
tr|B3VML4|B3VML4_VACVI Dehydrin COR11 OS=Vaccinium vitis-idaea P...    33   9.1  
tr|B8MHG3|B8MHG3_9EURO Putative uncharacterized protein OS=Talar...    33   9.1  
tr|B8MF09|B8MF09_9EURO Putative uncharacterized protein OS=Talar...    33   9.1  

>tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
           GN=DIP PE=4 SV=1
          Length = 113

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 109 VMEKIGEMLHMGGHRKEEEHPAHPPPQY 192
           ++ KIGE LH+GGH+KEEEH      +Y
Sbjct: 4   IINKIGETLHVGGHKKEEEHKGEVHGEY 31


>tr|Q090K0|Q090K0_STIAU Putative uncharacterized protein
           OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_5324 PE=4
           SV=1
          Length = 584

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 249 RCCWSCCHRRHPSSCASSCILRWWVSW 169
           R  W+   RRHP+ C  S   RWW SW
Sbjct: 558 RIPWTARRRRHPARCRPSSPARWWDSW 584


>tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max PE=4
           SV=1
          Length = 113

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +1

Query: 109 VMEKIGEMLHMGGHRKEEEH 168
           ++ KIG  LH+GGH+KEEEH
Sbjct: 4   IIHKIGGTLHVGGHKKEEEH 23


>tr|B7Q5P8|B7Q5P8_IXOSC Putative uncharacterized protein (Fragment)
           OS=Ixodes scapularis GN=IscW_ISCW021794 PE=4 SV=1
          Length = 325

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 255 HFRCCWSCCHRRHPSSCASSCILR 184
           H RCC SCC   +  SC S C+LR
Sbjct: 114 HLRCCPSCCQGVYRPSCPSRCLLR 137


>tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus
           GN=Ptgs1 PE=2 SV=1
          Length = 127

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 252 FRCCWSCCHRRHPSSCA 202
           F CC SCC RRHP SC+
Sbjct: 43  FPCCCSCCCRRHPRSCS 59


>tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus
           mongolicus GN=Cip PE=2 SV=1
          Length = 154

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = +1

Query: 109 VMEKIGEMLHMGGHRKEEEH 168
           ++ KIGE LH+GG++KE+EH
Sbjct: 4   IINKIGETLHVGGNKKEDEH 23


>tr|B0D0Y0|B0D0Y0_LACBS Predicted protein OS=Laccaria bicolor (strain
            S238N-H82) GN=LACBIDRAFT_313832 PE=4 SV=1
          Length = 2289

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -3

Query: 345  HTNTRSCQKQARSKLLR---RGHVSSSCALLPHHFRCCWSCCHRRHPSSCASSC 193
            H    +C ++ R K +    R + S+ CA  P    C W+C H+R   +C S C
Sbjct: 1671 HECATTCNEECRQKCVHTRCRQNCSTPCA--PCQEPCTWNCAHQRCHVACGSVC 1722


>tr|Q7Y1A0|Q7Y1A0_SOLSG 25 kDa protein dehydrin OS=Solanum
           sogarandinum PE=3 SV=1
          Length = 210

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 79  VSKHKQTVPN--VMEKIGEMLHMGGHRKEEEHPAHPPP 186
           V K+++T      +EKI E L  GGH+K EE  A PPP
Sbjct: 132 VEKYEETEEKKGFLEKIKEKLPGGGHKKTEEVAAPPPP 169


>tr|Q68YT2|Q68YT2_VACCO Dehydrin COR11 OS=Vaccinium corymbosum
           GN=bbdhn7 PE=4 SV=1
          Length = 108

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 109 VMEKIGEMLHMGGHRKEEE 165
           +M KIGE LHMGG +KEE+
Sbjct: 4   IMNKIGETLHMGGGKKEED 22


>tr|B7U4B1|B7U4B1_VACVI Dehydrin COR11 OS=Vaccinium vitis-idaea PE=4
           SV=1
          Length = 108

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 109 VMEKIGEMLHMGGHRKEEE 165
           +M KIGE LHMGG +KEE+
Sbjct: 4   IMNKIGETLHMGGGKKEED 22