DK946880 |
Clone id |
YMU02A01NGRL0014_A22 |
Library |
YMU02 |
Length |
547 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_A22. 5' end sequence. |
Accession |
DK946880 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL151Contig1 |
Sequence |
GCAAGTTATTGTTGATGCAGTTATCAACAGTGGTCCTCGGGAGGATGCCACTCGTATTGG ATCGGCTGGTGTTGTTAGAAGACAGGCTGTCGATATCTCTCCTCTTAGGAGAGTAAACCA GGCTATCTATCTCCTCACTACTGGTGCTCGAGAGAGTGCTTTCAGAAATATCAAGACTAT AGCGGAGTGCCTTGCTGATGAGCTGATCAATGCAGCCAAAGGTTCTTCCAATAGTTATGC TATCAAGAAGAAGGATGAGATTGAACGCGTGGCGAAGGCCAACCGTTAACTGTATTCTTA TTGCTGTTATTTGATGCCAGAGTTTGGCATGAAATTTTGACCTTCTTGAAGACTACTGCT GAGTGTTTTATACTCGCACAGCATTTTCTTGAGCAGTATTAGTGGCTTGTTTCTAGCAGC TTGCTACTCTTTGTCGGATGCGTTTTGACTACAAACATACTTAGTCTCGAGGTGGTCTTT ATTTAGTATATTGGTAGCAATCAAGCAATGAAAATTGTGTGATTTGTGTTTGGCTTAAAA AAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O24111 |
Definition |
sp|O24111|RS5_NICPL 40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia |
Align length |
95 |
Score (bit) |
179.0 |
E-value |
6.0e-45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6RH11 |
Definition |
tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annuum |
Align length |
95 |
Score (bit) |
181.0 |
E-value |
2.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946880|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_A22, 5' (536 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 181 2e-44 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 181 2e-44 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 181 2e-44 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 181 2e-44 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 181 3e-44 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 181 3e-44 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 181 3e-44 tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 181 3e-44 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 179 6e-44 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 179 6e-44 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 179 6e-44 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 179 6e-44 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 179 6e-44 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 179 8e-44 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 179 8e-44 tr|Q6Y0E6|Q6Y0E6_VITVI Putative 40S ribosomal protein S5 (Fragme... 179 1e-43 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 179 1e-43 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 177 3e-43 tr|Q016A0|Q016A0_OSTTA RS5_CICAR 40S ribosomal protein S5 (ISS) ... 177 4e-43 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 176 7e-43 tr|Q2UVI0|Q2UVI0_9CHLO 40S ribosomal protein S5 OS=Chlamydomonas... 174 3e-42 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 172 1e-41 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 172 1e-41 tr|B6E206|B6E206_CHLPR Ribosomal protein S5 OS=Chlorella prototh... 171 2e-41 tr|Q6QD56|Q6QD56_ORNMO 40S ribosomal protein S5 OS=Ornithodoros ... 168 1e-40 tr|B2YI07|B2YI07_9BILA Putative 40S ribosomal protein RPS5 OS=Ph... 168 2e-40 tr|Q6B8C3|Q6B8C3_9ACAR 40S ribosomal protein S5 OS=Ixodes pacifi... 167 2e-40 tr|Q4PMB9|Q4PMB9_IXOSC 40S ribosomal protein S5, putative OS=Ixo... 167 2e-40 tr|A6N9N9|A6N9N9_ORNPR Ribosomal protein S7 OS=Ornithodoros park... 167 2e-40 tr|Q7XYA3|Q7XYA3_GRIJA 40S ribosome protein S5 OS=Griffithsia ja... 167 3e-40
>tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annuum GN=RpS5 PE=2 SV=1 Length = 212
Score = 181 bits (460), Expect = 2e-44 Identities = 95/95 (100%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 118 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 177
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 178 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 212
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 181 bits (460), Expect = 2e-44 Identities = 95/95 (100%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 110 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 169
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 170 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 204
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 181 bits (459), Expect = 2e-44 Identities = 94/95 (98%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 101 QVIVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 160
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 161 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 195
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 181 bits (459), Expect = 2e-44 Identities = 94/95 (98%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRR+NQAIYLLTTGARESAFRNIKTI Sbjct: 114 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRINQAIYLLTTGARESAFRNIKTI 173
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 174 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
>tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2 SV=1 Length = 199
Score = 181 bits (458), Expect = 3e-44 Identities = 93/95 (97%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QV+VDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 105 QVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 164
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 165 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
>tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2 SV=1 Length = 199
Score = 181 bits (458), Expect = 3e-44 Identities = 93/95 (97%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QV+VDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 105 QVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 164
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 165 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
>tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 199
Score = 181 bits (458), Expect = 3e-44 Identities = 93/95 (97%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QV+VDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 105 QVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 164
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 165 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 181 bits (458), Expect = 3e-44 Identities = 93/95 (97%), Positives = 95/95 (100%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDA+INSGPREDATRIGSAGV+RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 102 QVIVDAIINSGPREDATRIGSAGVIRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 161
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 162 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 196
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 179 bits (455), Expect = 6e-44 Identities = 93/95 (97%), Positives = 94/95 (98%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDA+INSGPREDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 106 QVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 165
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 166 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 200
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 179 bits (455), Expect = 6e-44 Identities = 93/95 (97%), Positives = 94/95 (98%) Frame = +2
Query: 2 QVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 181 QVIVDA+INSGPREDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI Sbjct: 105 QVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 164
Query: 182 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 286 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 165 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
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