DK946889 |
Clone id |
YMU02A01NGRL0014_B12 |
Library |
YMU02 |
Length |
568 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_B12. 5' end sequence. |
Accession |
DK946889 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL2224Contig1 |
Sequence |
GCACTCCGTGCTTAATTGGAGAGGCAGCTGCAGTCATGAGCCTTGGTGATCAAGCAACTC ACCAAGATATGCTTCTTGTTAAAGTGCTATTTGAGGCTGTCGGAAGTATACACGTGGCAG AGGAGAAGCTTCTTAATGCAGTAACAGGCTTGAGTGGAAGTGGACCAGCATATGTTTATC TTGCAATTGAGGCAATGGCAGACGGTGGCGTAGCAGCAGGGCTACCTCGGGATCTTGCTT TGGCTCTGGCATCACAAACAGTTTTAGGAGCAGCCAAGATGGTGTTGGAAACAAAGAAAC ACCCTGGACAGTTGAAGGATGAGGTTACTTCTCCAGCAGGTACCACAATTGCAGGAATTA GAGCTTTAGAAAAGGCAGGTTTCCGAGCGGCCCTCATAGATGCTGTCGTAGCTGCAGCGA AGAGAGGTGAAGAGCTTTCAAAATCTTAGGATCGAAGCATCTATTCTGATGCCAGATTCT TGACAAATTTATGATGTGACAGTGATCACGTCAAAAATTAGTTCAGGCTTTTATTTTGCT AAGCGAGCCTATACAGCAGGAAAACTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54904 |
Definition |
sp|P54904|P5CR1_ARATH Pyrroline-5-carboxylate reductase OS=Arabidopsis thaliana |
Align length |
148 |
Score (bit) |
182.0 |
E-value |
7.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946889|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_B12, 5' (555 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P54904|P5CR1_ARATH Pyrroline-5-carboxylate reductase OS=Arabi... 182 7e-46 sp|P17817|P5CR_SOYBN Pyrroline-5-carboxylate reductase OS=Glycin... 181 2e-45 sp|Q04708|P5CR_PEA Pyrroline-5-carboxylate reductase OS=Pisum sa... 180 4e-45 sp|O04016|P5CR_ACTCH Pyrroline-5-carboxylate reductase OS=Actini... 176 5e-44 sp|P74572|P5CR_SYNY3 Pyrroline-5-carboxylate reductase OS=Synech... 142 8e-34 sp|Q9HH99|P5CR_METAC Pyrroline-5-carboxylate reductase OS=Methan... 141 2e-33 sp|Q17QJ7|P5CR2_BOVIN Pyrroline-5-carboxylate reductase 2 OS=Bos... 136 8e-32 sp|Q58DT4|P5CR1_BOVIN Pyrroline-5-carboxylate reductase 1, mitoc... 135 1e-31 sp|Q5R9X6|P5CR1_PONAB Pyrroline-5-carboxylate reductase 1, mitoc... 134 2e-31 sp|P32322|P5CR1_HUMAN Pyrroline-5-carboxylate reductase 1, mitoc... 134 2e-31 sp|Q6AY23|P5CR2_RAT Pyrroline-5-carboxylate reductase 2 OS=Rattu... 132 9e-31 sp|Q922Q4|P5CR2_MOUSE Pyrroline-5-carboxylate reductase 2 OS=Mus... 132 9e-31 sp|Q4R6W7|P5CR2_MACFA Pyrroline-5-carboxylate reductase 2 OS=Mac... 132 9e-31 sp|Q5RAQ3|P5CR2_PONAB Pyrroline-5-carboxylate reductase 2 OS=Pon... 132 1e-30 sp|Q96C36|P5CR2_HUMAN Pyrroline-5-carboxylate reductase 2 OS=Hom... 132 1e-30 sp|Q922W5|P5CR1_MOUSE Pyrroline-5-carboxylate reductase 1, mitoc... 131 2e-30 sp|P0A9L9|P5CR_SHIFL Pyrroline-5-carboxylate reductase OS=Shigel... 121 2e-27 sp|P0A9L8|P5CR_ECOLI Pyrroline-5-carboxylate reductase OS=Escher... 121 2e-27 sp|Q5PQJ6|P5CR3_RAT Pyrroline-5-carboxylate reductase 3 OS=Rattu... 120 3e-27 sp|Q9DCC4|P5CR3_MOUSE Pyrroline-5-carboxylate reductase 3 OS=Mus... 117 4e-26 sp|Q5SPD7|P5CR3_DANRE Pyrroline-5-carboxylate reductase 3 OS=Dan... 116 8e-26 sp|Q53H96|P5CR3_HUMAN Pyrroline-5-carboxylate reductase 3 OS=Hom... 109 1e-23 sp|P14383|P5CR1_BACSU Pyrroline-5-carboxylate reductase 1 OS=Bac... 109 1e-23 sp|Q4R531|P5CR3_MACFA Pyrroline-5-carboxylate reductase 3 OS=Mac... 108 1e-23 sp|P54552|P5CR2_BACSU Pyrroline-5-carboxylate reductase 2 OS=Bac... 108 2e-23 sp|Q58D08|P5CR3_BOVIN Pyrroline-5-carboxylate reductase 3 OS=Bos... 107 4e-23 sp|P0C1E5|P5CR_CORML Pyrroline-5-carboxylate reductase OS=Coryne... 107 5e-23 sp|P0C1E4|P5CR_CORGL Pyrroline-5-carboxylate reductase OS=Coryne... 107 5e-23 sp|P54893|P5CR_THET2 Pyrroline-5-carboxylate reductase OS=Thermu... 103 6e-22 sp|Q11141|P5CR_MYCTU Pyrroline-5-carboxylate reductase OS=Mycoba... 102 1e-21
>sp|P54904|P5CR1_ARATH Pyrroline-5-carboxylate reductase OS=Arabidopsis thaliana GN=PROC1 PE=2 SV=1 Length = 276
Score = 182 bits (463), Expect = 7e-46 Identities = 96/148 (64%), Positives = 113/148 (76%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP +GEAA+VMSLG AT +D +V +LF AVG I A+EK+ +AVTGLSGSGPAY++L Sbjct: 129 TPAAVGEAASVMSLGTGATEEDGAIVAMLFGAVGKILKADEKMFDAVTGLSGSGPAYIFL 188
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 AIEA+ADGGVAAGLPR+LAL+LASQTVLGAA MV +T KHPG LKD+VTSP GTTIAG+ Sbjct: 189 AIEALADGGVAAGLPRELALSLASQTVLGAATMVSKTGKHPGVLKDDVTSPGGTTIAGVH 248
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSKS 446 LEK FR KR ELS+S Sbjct: 249 ELEKGSFRATLMNAVVAAAKRSRELSQS 276
>sp|P17817|P5CR_SOYBN Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1 Length = 274
Score = 181 bits (460), Expect = 2e-45 Identities = 94/146 (64%), Positives = 109/146 (74%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP +G+AA+VMSLG AT +D ++ LF ++G I AEEK +A+TGLSGSGPAYVYL Sbjct: 129 TPAAVGQAASVMSLGGSATEEDGNIIAQLFGSIGKIWKAEEKYFDAITGLSGSGPAYVYL 188
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 AIEA+ADGGVAAGLPRDL+L+LASQTVLGAA MV +T KHPGQLKD+VTSP GTTI GI Sbjct: 189 AIEALADGGVAAGLPRDLSLSLASQTVLGAASMVSQTGKHPGQLKDDVTSPGGTTITGIH 248
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELS 440 LE GFR KR ELS Sbjct: 249 ELENGGFRGTLMNAVVAAAKRSRELS 274
>sp|Q04708|P5CR_PEA Pyrroline-5-carboxylate reductase OS=Pisum sativum GN=PROC PE=2 SV=1 Length = 273
Score = 180 bits (457), Expect = 4e-45 Identities = 92/146 (63%), Positives = 109/146 (74%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP +G+AA+VMSLG AT +D L+ LF ++G I A++K +A+TGLSGSGPAY+YL Sbjct: 128 TPAAVGQAASVMSLGGAATEEDANLISQLFGSIGKIWKADDKFFDAITGLSGSGPAYIYL 187
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 AIEA+ADGGVAAGLPRDLAL+LASQTVLGAA M + KHPGQLKD+VTSP GTTIAG+ Sbjct: 188 AIEALADGGVAAGLPRDLALSLASQTVLGAASMATLSGKHPGQLKDDVTSPGGTTIAGVH 247
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELS 440 LEK GFR KR ELS Sbjct: 248 ELEKGGFRGTLMNAVVAAAKRSRELS 273
>sp|O04016|P5CR_ACTCH Pyrroline-5-carboxylate reductase OS=Actinidia chinensis PE=2 SV=1 Length = 278
Score = 176 bits (447), Expect = 5e-44 Identities = 94/147 (63%), Positives = 108/147 (73%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP +GEAA+VMSLG AT +D L+ LF A+G I A+EKL +AVTGLSGSGPAY++L Sbjct: 131 TPAAVGEAASVMSLGATATGEDGELITKLFGAIGKIWKADEKLFDAVTGLSGSGPAYIFL 190
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 AIEA+ADGGVAAGLPR+LAL LASQTVLGAA MV KHPGQLKD+V S GTTIAGI Sbjct: 191 AIEALADGGVAAGLPRELALGLASQTVLGAASMVARGGKHPGQLKDDVASAGGTTIAGIH 250
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSK 443 LEK GFR KR +E+ K Sbjct: 251 ELEKGGFRGTLMNAVVSATKRSQEIFK 277
>sp|P74572|P5CR_SYNY3 Pyrroline-5-carboxylate reductase OS=Synechocystis sp. (strain PCC 6803) GN=proC PE=3 SV=1 Length = 267
Score = 142 bits (359), Expect = 8e-34 Identities = 72/147 (48%), Positives = 94/147 (63%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP +G ++ + K +F AVG++ E L++AVTG+SGSGPAYV L Sbjct: 120 TPATVGAGMTAIAANKMVEPDQLAKAKAIFSAVGNVVEVPENLMDAVTGVSGSGPAYVAL 179
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 IEA+ADGGV AGLPR +A LA QTVLG A+++ ET++HP Q+KD+VTSP GTTIAG+ Sbjct: 180 MIEALADGGVLAGLPRAIAQKLALQTVLGTAELIKETEEHPAQIKDKVTSPGGTTIAGVA 239
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSK 443 LEK GFR +R +EL K Sbjct: 240 VLEKMGFRSAIIEAVRAAYRRSQELGK 266
>sp|Q9HH99|P5CR_METAC Pyrroline-5-carboxylate reductase OS=Methanosarcina acetivorans GN=proC PE=3 SV=1 Length = 270
Score = 141 bits (356), Expect = 2e-33 Identities = 76/143 (53%), Positives = 96/143 (67%) Frame = +3
Query: 15 IGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYLAIEA 194 + EAA+ ++ G AT +D+ +F AVG+ E L++AVTGLSGSGPA+++ IEA Sbjct: 127 VSEAASGIAPGKNATPEDLKAALEIFSAVGTAVQVPESLMDAVTGLSGSGPAFIFPVIEA 186
Query: 195 MADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIRALEK 374 MADG V G+ R AL LA+QTVLGAAKM LET HPG+LKD VTSPAGTTI GI +LE+ Sbjct: 187 MADGAVLEGMDRKSALTLAAQTVLGAAKMALETGMHPGELKDMVTSPAGTTIQGIHSLEE 246
Query: 375 AGFRXXXXXXXXXXXKRGEELSK 443 AG R +R +EL K Sbjct: 247 AGIRAAFMNAVIRASERSKELGK 269
>sp|Q17QJ7|P5CR2_BOVIN Pyrroline-5-carboxylate reductase 2 OS=Bos taurus GN=PYCR2 PE=2 SV=1 Length = 320
Score = 136 bits (342), Expect = 8e-32 Identities = 74/157 (47%), Positives = 97/157 (61%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP L+ E A V + G A +D L++ L +VG EE L++AVTGLSGSGPAY ++ Sbjct: 124 TPVLVREGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFM 183
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 A++A+ADGGV GLPR LA+ L +Q +LGAAKM+L++++HPGQLKD V SP G TI + Sbjct: 184 ALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPGQLKDNVCSPGGATIHALH 243
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSKS*DRSIYSDA 473 LE GFR R EL D+ S A Sbjct: 244 FLESGGFRSLLINAVEASCIRTRELQSMADQEKISPA 280
>sp|Q58DT4|P5CR1_BOVIN Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Bos taurus GN=PYCR1 PE=2 SV=1 Length = 320
Score = 135 bits (340), Expect = 1e-31 Identities = 73/157 (46%), Positives = 96/157 (61%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP ++ E A V + G A +D L++ L +VG EE L++AVTGLSGSGPAY + Sbjct: 124 TPVVVREGATVYATGTHAQVEDGRLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFT 183
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 A++A+ADGGV GLPR LA+ L +Q +LGAAKM+L++++HPGQLKD V SP G TI + Sbjct: 184 ALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPGQLKDNVCSPGGATIHALH 243
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSKS*DRSIYSDA 473 LE GFR R EL D+ S A Sbjct: 244 VLESGGFRSLLIKAVEASCTRTRELQSMADQEKVSPA 280
>sp|Q5R9X6|P5CR1_PONAB Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Pongo abelii GN=PYCR1 PE=2 SV=1 Length = 319
Score = 134 bits (338), Expect = 2e-31 Identities = 73/157 (46%), Positives = 96/157 (61%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP ++ E A V + G A +D L++ L +VG EE L++AVTGLSGSGPAY + Sbjct: 124 TPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFT 183
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 A++A+ADGGV GLPR LA+ L +Q +LGAAKM+L +++HPGQLKD V+SP G TI + Sbjct: 184 ALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALH 243
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSKS*DRSIYSDA 473 LE GFR R EL D+ S A Sbjct: 244 VLESGGFRSLLINAVEASCIRTRELQSMADQEQVSPA 280
>sp|P32322|P5CR1_HUMAN Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Homo sapiens GN=PYCR1 PE=1 SV=2 Length = 319
Score = 134 bits (338), Expect = 2e-31 Identities = 73/157 (46%), Positives = 96/157 (61%) Frame = +3
Query: 3 TPCLIGEAAAVMSLGDQATHQDMLLVKVLFEAVGSIHVAEEKLLNAVTGLSGSGPAYVYL 182 TP ++ E A V + G A +D L++ L +VG EE L++AVTGLSGSGPAY + Sbjct: 124 TPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFT 183
Query: 183 AIEAMADGGVAAGLPRDLALALASQTVLGAAKMVLETKKHPGQLKDEVTSPAGTTIAGIR 362 A++A+ADGGV GLPR LA+ L +Q +LGAAKM+L +++HPGQLKD V+SP G TI + Sbjct: 184 ALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALH 243
Query: 363 ALEKAGFRXXXXXXXXXXXKRGEELSKS*DRSIYSDA 473 LE GFR R EL D+ S A Sbjct: 244 VLESGGFRSLLINAVEASCIRTRELQSMADQEQVSPA 280
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNU3 |
Definition |
tr|A9NNU3|A9NNU3_PICSI Pyrroline-5-carboxylate reductase OS=Picea sitchensis |
Align length |
148 |
Score (bit) |
212.0 |
E-value |
9.0e-54 |
Report |
|