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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946913
Clone id YMU02A01NGRL0014_C18
Library
Length 225
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_C18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GACAAAAAAGGTTATGGATACAAGAGATGAAAAACCCAATACAAAAAGTCACCTTTCAAT
TTATCATGACCTGCAGTCTGCCAGAATCATTCGCTATTGTTCCATTGGTTTCCAAATGGA
TATATAGATTTGAAATTTCAAAGAACAAGGATAAAAAAATATTACACACCGTTACGGCCT
ATCCATATAAGATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q49WB0
Definition sp|Q49WB0|CDR_STAS1 Coenzyme A disulfide reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
Align length 26
Score (bit) 29.3
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946913|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_C18, 5'
         (195 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q49WB0|CDR_STAS1 Coenzyme A disulfide reductase OS=Staphyloco...    29   6.5  

>sp|Q49WB0|CDR_STAS1 Coenzyme A disulfide reductase
           OS=Staphylococcus saprophyticus subsp. saprophyticus
           (strain ATCC 15305 / DSM 20229) GN=cdr PE=3 SV=1
          Length = 440

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 38  NTKSHLSIYHDLQSARIIRYCSIGFQ 115
           NTK HL +Y D  + RIIR  ++G +
Sbjct: 365 NTKLHLRVYFDKTNRRIIRAAAVGMK 390
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946913|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_C18, 5'
         (195 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******