DK946927 |
Clone id |
YMU02A01NGRL0014_D12 |
Library |
YMU02 |
Length |
536 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_D12. 5' end sequence. |
Accession |
DK946927 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL15Contig1 |
Sequence |
GCAAGGGAAGTGGTATTGCTAACCAGTGTCCTGTCATCAAGGGTGGAGCCGATGCCTTTG GTCTCAAGCCTGGCAAATATCAGCTCAAGAAGTTGTGCTTGGAGCCCACTTCTTTCAGGG TGAAAGCAGAGTCTCAGTTCAAGGGAGGAGCCCCAGACTTTCAGCCCACCAAGCTCATGA CAAGGCTTACGTACACCCTGGATGAGATTGAAGGTCCTTTGGAGGTAGGTGCTGATGGGA CTCTCAAATTTGAGGAGCAAGATGGAATCGACTATGCTGCAGTGACCGTTCAGCTCCCTG GGGGTGAAAGGGTGCCCTTCTTGTTCACCATCAAGCAGCTTGTAGCCACAGGAAAGCCTG ATGCCTTCAGTGGACAATTCTTGGTGCCTTCATACAGAGGTTCTTCCTTCCTTGACCCTA AGGGCCGTGGTGGCTCCCAAGGATATGACAACGCTGTGGCTATTCCTGCTGGAGGTGCTG GTGATGAGGAAGAGCTAGCGAAAGAGAATAACAAGGATACAACCGCTCTTAATGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23322 |
Definition |
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum |
Align length |
178 |
Score (bit) |
291.0 |
E-value |
1.0e-78 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946927|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_D12, 5' (536 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 291 1e-78 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 290 4e-78 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 290 4e-78 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 289 5e-78 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 289 7e-78 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 283 4e-76 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 280 3e-75 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 277 3e-74 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 261 1e-69 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 227 3e-59 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 226 5e-59 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 207 3e-53 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 171 2e-42 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 166 5e-41 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 166 5e-41 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 154 3e-37 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 148 2e-35 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 139 1e-32 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 79 1e-14 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 53 1e-06 sp|P81665|PSBO_PINPS Oxygen-evolving enhancer protein 1 (Fragmen... 35 0.18 sp|Q6PIF2|SYCE2_HUMAN Synaptonemal complex central element prote... 34 0.39 sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1 ... 32 1.5 sp|Q580R0|CB027_HUMAN Uncharacterized protein C2orf27 OS=Homo sa... 31 3.3 sp|Q882P7|Y2578_PSESM UPF0343 protein PSPTO_2578 OS=Pseudomonas ... 31 4.3 sp|Q9P1Z9|K1529_HUMAN Uncharacterized protein KIAA1529 OS=Homo s... 31 4.3 sp|A0JUI0|GATC_ARTS2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 30 5.7 sp|Q42963|PMT1_TOBAC Putrescine N-methyltransferase 1 OS=Nicotia... 30 7.4 sp|Q8VDQ1|PTGR2_MOUSE Prostaglandin reductase 2 OS=Mus musculus ... 30 9.7 sp|Q9SEH5|PMT3_TOBAC Putrescine N-methyltransferase 3 OS=Nicotia... 30 9.7
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 291 bits (746), Expect = 1e-78 Identities = 141/178 (79%), Positives = 153/178 (85%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I+GG +F KPGKY KK CLEPTSF VKAE K APDFQ TKLMT Sbjct: 103 KGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMT 162
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP+ Sbjct: 163 RLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE 222
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T +L G Sbjct: 223 SFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTG 280
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 290 bits (741), Expect = 4e-78 Identities = 141/178 (79%), Positives = 151/178 (84%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I GG D+F KPGKY KK CLEPTSF VKAE K APDFQ TKLMT Sbjct: 106 KGTGTANQCPTIDGGVDSFAFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMT 165
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP+ Sbjct: 166 RLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE 225
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FS FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T +L G Sbjct: 226 SFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTG 283
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 290 bits (741), Expect = 4e-78 Identities = 140/178 (78%), Positives = 153/178 (85%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KGSG ANQCP I+GG ++FG K GKY LKKLCLEPTSF VKAE K P+FQ TKLMT Sbjct: 103 KGSGTANQCPTIEGGTESFGYKTGKYTLKKLCLEPTSFTVKAEGINKNAPPEFQKTKLMT 162
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFT+KQLVATGKP+ Sbjct: 163 RLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE 222
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FSG +LVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN KD ++ G Sbjct: 223 SFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTG 280
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 289 bits (740), Expect = 5e-78 Identities = 138/178 (77%), Positives = 151/178 (84%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP ++GG D+F KPGKY KK CLEPT F VKAE K PDFQ TKLMT Sbjct: 104 KGTGTANQCPTVEGGVDSFAFKPGKYTAKKFCLEPTKFAVKAEGISKNSGPDFQNTKLMT 163
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP+ Sbjct: 164 RLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE 223
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FSG FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KENNK+ + G Sbjct: 224 SFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKG 281
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 289 bits (739), Expect = 7e-78 Identities = 140/178 (78%), Positives = 153/178 (85%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I GG +F KPGKY KK CLEPTSF VKAES K PDFQ TKLMT Sbjct: 106 KGTGTANQCPTIDGGVASFAFKPGKYNAKKFCLEPTSFTVKAESVNKNAPPDFQKTKLMT 165
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP+ Sbjct: 166 RLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE 225
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T++ G Sbjct: 226 SFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTG 283
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 283 bits (724), Expect = 4e-76 Identities = 138/178 (77%), Positives = 149/178 (83%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I GG D+F KPGKY KKLCLEPTSF VK+E K FQ TKLMT Sbjct: 102 KGTGTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLMT 161
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV ADG++KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKPD Sbjct: 162 RLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPD 221
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FSG+FLVPSYRGSSFLDPKGRG S GYDNAVA+PAGG GDEEEL KENNK + G Sbjct: 222 SFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKG 279
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 280 bits (716), Expect = 3e-75 Identities = 135/178 (75%), Positives = 152/178 (85%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I GG++ F K GKY KK C EPTSF VKA+S K PDFQ TKLMT Sbjct: 105 KGTGTANQCPTIDGGSETFSFKAGKYTGKKFCFEPTSFTVKADSVSKNAPPDFQNTKLMT 164
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EVG+DG++KF+E+DGIDYAAVTVQLPGGERVPFLFT+KQL A+GKP+ Sbjct: 165 RLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPE 224
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL+KEN K+T A G Sbjct: 225 SFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVG 282
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 277 bits (708), Expect = 3e-74 Identities = 133/178 (74%), Positives = 150/178 (84%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I GG++ F KPGKY KK C EPTSF VKA+S K P+FQ TKLMT Sbjct: 106 KGTGTANQCPTIDGGSETFSFKPGKYAGKKFCFEPTSFTVKADSVSKNAPPEFQNTKLMT 165
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDEIEGP EV +DG++ F+E+DGIDYAAVTVQLPGGERVPFLFT+KQL A+GKPD Sbjct: 166 RLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPD 225
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +F+G+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T A G Sbjct: 226 SFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVG 283
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 261 bits (668), Expect = 1e-69 Identities = 132/178 (74%), Positives = 145/178 (81%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 182 KG+G ANQCP I GG D+F K GKY++KK CLEPTSF VKAE K P FQ TKLMT Sbjct: 100 KGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPRFQKTKLMT 159
Query: 183 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 362 RLTYTLDE+EGPLEV TLKFEE+DGIDYAAVTVQLPGGERV FLFT+KQLVATGKP+ Sbjct: 160 RLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPE 219
Query: 363 AFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 +F FLVPSYRGSSFLDPKGRGGS GYDNA A+P GG GDEEELAKEN K+ ++ G Sbjct: 220 SFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTG 276
>sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1 Length = 291
Score = 227 bits (578), Expect = 3e-59 Identities = 118/179 (65%), Positives = 131/179 (73%), Gaps = 1/179 (0%) Frame = +3
Query: 3 KGSGIANQCPVIKGGADAFG-LKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 179 KGSGIAN CPV++ G LK G Y+L+ C+EPTSF VK ESQFKGG +F TKLM Sbjct: 66 KGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLM 125
Query: 180 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 359 TRLTYTLD + G +VG+DG+ + +E DGIDYAA TVQLPGGERV FLFTIKQ G Sbjct: 126 TRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTL 185
Query: 360 DAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNG 536 D G FLVPSYRGSSFLDPKGRGGS GYDNAVA+PA D EEL KEN K T AL G Sbjct: 186 DGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKG 242
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
178 |
Score (bit) |
298.0 |
E-value |
9.0e-80 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |