DK946932 |
Clone id |
YMU02A01NGRL0014_D17 |
Library |
YMU02 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_D17. 5' end sequence. |
Accession |
DK946932 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL21Contig1 |
Sequence |
CCCTTCAAAACCAGCAGCTTGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAA CACCCGCAGTGCAGGCCAGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCA GGAATGGCTAGCAATGGAGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAG AAGTCATCTTATGCAGTCAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATG GATGTTGTGAATGCAGAGCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATG GCCCTCGAACGTGTGCCTGCGGACATCAGGGCTGAGGGTGGTGTGGCTCGCAAGAGTGAT CCTGGTTTGATCAAGGAGATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGA ATTGGGCATTTTGTGGAAGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAG AGTGAGGTCCTTACCCCAGCGGATGATGTGAACCACATCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
132 |
Score (bit) |
233.0 |
E-value |
5.0e-61 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
131 |
Score (bit) |
214.0 |
E-value |
3.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946932|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_D17, 5' (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 214 3e-54 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 213 5e-54 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 212 1e-53 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 210 4e-53 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 207 3e-52 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 206 7e-52 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 205 1e-51 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 202 6e-51 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 202 6e-51 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 201 2e-50 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 200 3e-50 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 200 3e-50 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 199 9e-50 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 199 9e-50 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 197 3e-49 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 193 5e-48 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 192 1e-47 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 192 1e-47 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 192 1e-47 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 191 2e-47 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 189 7e-47 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 189 9e-47 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 189 9e-47 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 188 1e-46 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 188 1e-46 tr|Q1DU32|Q1DU32_COCIM Putative uncharacterized protein OS=Cocci... 188 2e-46 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 187 4e-46 tr|B6JV77|B6JV77_SCHJP Pyridoxal biosynthesis lyase pdxS OS=Schi... 185 1e-45 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 184 2e-45 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 183 4e-45
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 214 bits (544), Expect = 3e-54 Identities = 109/131 (83%), Positives = 121/131 (92%) Frame = +1
Query: 127 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 306 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 307 ERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 486 ERVPADIRA+GGVAR SDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 487 VLTPADDVNHI 519 VLT ADD NHI Sbjct: 124 VLTLADDANHI 134
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 213 bits (542), Expect = 5e-54 Identities = 111/133 (83%), Positives = 123/133 (92%), Gaps = 1/133 (0%) Frame = +1
Query: 124 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 300 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 301 ALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 480 ALERVPADIRA+GGVAR SDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 481 SEVLTPADDVNHI 519 SEVLT ADD NHI Sbjct: 121 SEVLTLADDENHI 133
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 212 bits (539), Expect = 1e-53 Identities = 112/133 (84%), Positives = 122/133 (91%), Gaps = 1/133 (0%) Frame = +1
Query: 124 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 300 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 301 ALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 480 ALERVPADIRA+GGVAR SDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 481 SEVLTPADDVNHI 519 SEVLT AD+ NHI Sbjct: 121 SEVLTLADEDNHI 133
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 210 bits (534), Expect = 4e-53 Identities = 115/138 (83%), Positives = 122/138 (88%), Gaps = 6/138 (4%) Frame = +1
Query: 124 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 285 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 286 ATAVMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 465 A AVMALERVPADIRAEGGVAR SDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 466 DYIDESEVLTPADDVNHI 519 DYIDESEVLTPADDVNHI Sbjct: 121 DYIDESEVLTPADDVNHI 138
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 207 bits (527), Expect = 3e-52 Identities = 112/137 (81%), Positives = 116/137 (84%), Gaps = 5/137 (3%) Frame = +1
Query: 124 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 288 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 289 TAVMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 468 AVMALERVPADIRAEGGVAR SDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 469 YIDESEVLTPADDVNHI 519 YIDESEVLTPADDVNHI Sbjct: 121 YIDESEVLTPADDVNHI 137
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 206 bits (523), Expect = 7e-52 Identities = 108/137 (78%), Positives = 121/137 (88%), Gaps = 5/137 (3%) Frame = +1
Query: 124 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 288 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 289 TAVMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 468 AVMALERVPADIRA+GGVAR SDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 469 YIDESEVLTPADDVNHI 519 Y+DESEVLT AD+ NHI Sbjct: 121 YVDESEVLTLADEDNHI 137
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 205 bits (521), Expect = 1e-51 Identities = 105/135 (77%), Positives = 118/135 (87%), Gaps = 6/135 (4%) Frame = +1
Query: 133 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 294 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 295 VMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 474 VMALERVPADIRA+GGVAR SDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 475 DESEVLTPADDVNHI 519 DESEVLTPADD +HI Sbjct: 126 DESEVLTPADDAHHI 140
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 202 bits (515), Expect = 6e-51 Identities = 106/135 (78%), Positives = 119/135 (88%), Gaps = 6/135 (4%) Frame = +1
Query: 133 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 294 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 295 VMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 474 VMALERVPADIRA+GGVAR SDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 475 DESEVLTPADDVNHI 519 DESEVLTPADD +HI Sbjct: 126 DESEVLTPADDAHHI 140
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 202 bits (515), Expect = 6e-51 Identities = 106/135 (78%), Positives = 119/135 (88%), Gaps = 6/135 (4%) Frame = +1
Query: 133 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 294 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 69 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 128
Query: 295 VMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 474 VMALERVPADIRA+GGVAR SDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 129 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 188
Query: 475 DESEVLTPADDVNHI 519 DESEVLTPADD +HI Sbjct: 189 DESEVLTPADDAHHI 203
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 201 bits (511), Expect = 2e-50 Identities = 109/136 (80%), Positives = 115/136 (84%), Gaps = 4/136 (2%) Frame = +1
Query: 124 MASNGVVTVYGNGA----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAT 291 M N VV V NG+ + K SYAVKVGLAQMLRGGVIMDVV+ QARIAEEAGA Sbjct: 1 MEENRVVAVLNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDVAQARIAEEAGAV 60
Query: 292 AVMALERVPADIRAEGGVARKSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDY 471 AVMALERVPADIRAEGGVAR SDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY Sbjct: 61 AVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVDY 120
Query: 472 IDESEVLTPADDVNHI 519 IDESEVLTPADDV+HI Sbjct: 121 IDESEVLTPADDVHHI 136
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