DK946948
Clone id YMU02A01NGRL0014_E13
Library
Length 451
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_E13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TTATGCACGTAAAGGGACAGGATCACACGCACTATCTGTTTGGCTATGCTGAATTCTGTC
GAAATTTGCTTTTGTTTGGTTTATGCTTTTGAACAGGCAACACCTTAGATTGTATGAAAA
AGCAGCCACATACACGAACAATGCAGTGTGCCCTTCGTATGAAATCGCAGCACCTATATA
GATAGTTGATCAAAAGAAACAAGAAAGAACCAACCACGAGCTGAAAGCCTACTTAACCAC
GCCAGCCTACTGCCTACTCACAGGTAACATCAGCTATATGGTATATTCTATGCGCAAAGC
AATCAATCATCGTATATATGATTGATAACGTTGACACTGGGGCATACCCATGACACGGTA
CCATTTTTCTCTGATGTCACAGACGCTTTGAGCAAGGGAAAGAAACTAAAAAATCCATGG
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q91DD4
Definition sp|Q91DD4|L_EBORE Large structural protein OS=Reston ebolavirus (strain Philippines-96)
Align length 82
Score (bit) 30.4
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946948|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_E13, 5'
(421 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q91DD4|L_EBORE Large structural protein OS=Reston ebolavirus ... 30 3.0
sp|Q8JPX5|L_EBORR Large structural protein OS=Reston ebolavirus ... 30 5.0
sp|P58132|RPOC2_ASTLO DNA-directed RNA polymerase subunit beta''... 29 6.6
sp|Q99572|P2RX7_HUMAN P2X purinoceptor 7 OS=Homo sapiens GN=P2RX... 29 6.6

>sp|Q91DD4|L_EBORE Large structural protein OS=Reston ebolavirus
(strain Philippines-96) GN=L PE=3 SV=1
Length = 2212

Score = 30.4 bits (67), Expect = 3.0
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Frame = +2

Query: 119 KAATYTNNAVCPSYEIAAPI*IV-------------DQKKQERTN-------HELKAYLT 238
K Y N P+ ++++P ++ DQ QE N H+L++ L
Sbjct: 1738 KEGDYFQNNTPPTDDVSSPHRLILPFFKLGNHNHAHDQDAQELINQNIKQYLHQLRSMLD 1797

Query: 239 TPAYCLLTGNISYMVYSMRKAI 304
T YC TG +S M Y + + +
Sbjct: 1798 TTIYCRFTGIVSSMHYKLDEVL 1819


>sp|Q8JPX5|L_EBORR Large structural protein OS=Reston ebolavirus
(strain Reston-89) GN=L PE=3 SV=1
Length = 2212

Score = 29.6 bits (65), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = +2

Query: 188 DQKKQERTN-------HELKAYLTTPAYCLLTGNISYMVYSMRKAI 304
DQ QE N H+L++ L T YC TG +S M Y + + +
Sbjct: 1774 DQDAQELMNQNIKQYLHQLRSMLDTTIYCRFTGIVSSMHYKLDEVL 1819


>sp|P58132|RPOC2_ASTLO DNA-directed RNA polymerase subunit beta''
OS=Astasia longa GN=rpoC2 PE=3 SV=1
Length = 817

Score = 29.3 bits (64), Expect = 6.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2

Query: 212 NHELKAYLTTPAYCLLTGNISYMVYSMRKA 301
NH + Y+ TP C+LT I M Y A
Sbjct: 278 NHNINIYIRTPLNCILTTGICQMCYGWNLA 307


>sp|Q99572|P2RX7_HUMAN P2X purinoceptor 7 OS=Homo sapiens GN=P2RX7
PE=1 SV=2
Length = 595

Score = 29.3 bits (64), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2

Query: 183 IYIGAAISYEGHTALFVYVAAFSYNLRCC 97
+YIG+ +SY G A+F+ +Y+ CC
Sbjct: 335 VYIGSTLSYFGLAAVFIDFLIDTYSSNCC 363


tr_hit_id P91457
Definition tr|P91457|P91457_CAEEL Nuclear pore complex protein protein 7 OS=Caenorhabditis elegans
Align length 39
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946948|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_E13, 5'
(421 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|P91457|P91457_CAEEL Nuclear pore complex protein protein 7 OS... 33 9.2

>tr|P91457|P91457_CAEEL Nuclear pore complex protein protein 7
OS=Caenorhabditis elegans GN=npp-7 PE=2 SV=1
Length = 1217

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3

Query: 386 ASVTSEKNGT-VSWVCPSVNVINHIYDD*LLCA*NIPYS 273
A+VTS NGT V W CP V N DD C ++ Y+
Sbjct: 661 AAVTSSSNGTRVDWECPDCMVSNKASDDKCPCCSHVKYA 699