DK946962 [AcEST]

DK946962
Clone id	YMU02A01NGRL0014_F04
Library	YMU02
Length	350
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_F04. 5' end sequence.
Accession	DK946962
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig2
Sequence	GCGAAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGAT CTCCCAGAGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGG GCAAAAATGATGAATAGAATAAATTGAAAGAAAAGTGAAAAAAAAAATGGAAAAGGGCAA GAAGGCCTTGTGAAAATATTACGATTTTTGATCTCGCACGACAAATTCTGATAAAATGAC TTATCAACAATCTGGTAATCTCATATTCAAGAGAACTATACCAACTCCTGAAATGATGAA TAGAATAAATTGAAAGACAAAACCCTAAAAAAAATATCAAAAAACCTTGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O48671
Definition	sp\|O48671\|RER1B_ARATH Protein RER1B OS=Arabidopsis thaliana
Align length	35
Score (bit)	31.2
E-value	1.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK946962\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_F04, 5' (350 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O48671\|RER1B_ARATH Protein RER1B OS=Arabidopsis thaliana GN=R... 31 1.7 >sp\|O48671\|RER1B_ARATH Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2 Length = 195 Score = 31.2 bits (69), Expect = 1.7 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -2 Query: 346 GFLIFFLGFCLSIYSIHHFRSWYSSLEYEITRLLI 242 G L+FFL +CL +YSIH F L + LLI Sbjct: 43 GTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLI 77
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK946962\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_F04, 5' (350 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****