DK946966
Clone id YMU02A01NGRL0014_F08
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_F08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCATGCCTTGTGCTAAATATCAAAGAAATCTCCAGTCCCAGAATGTAGTCTCGTCCTCTC
GATTCACCCACAGCCACATCATTAAGGCTGCACAGACGCAGTCCGCTCCTCGCGCACGCG
AAACGGAGAACGTATCGCTCAAGGGTGATGCAGAGGATGCTGCCTTGAAGGTATTTGCTG
ATGATACAAAAGGAATTGTATGCTATCGAACAGAGTCTGGTGAAATCGTTTGTGAGGGCA
TGGATGAGGGCCCTCAGTTCTATCCTCCTTCTGGGGCGAACTTCTACATGCCCGATACTC
GAGCTGCTGCTATCCTTCCTCTGCTAGGAGAGGTTATGTATGAAATCTAAGATTACAAAG
GCGTCGTGGGCTTTTCTTGTTCTTCAAGATAAGCATAAGCTTTTGCGAACTTGATGATGT
GGGGAGTAGTTGTAATCCAGAGTAAGCAAAGGTTAATTCACTTATAGAGAGATTATTATC
TTAAGTGTGGTTGGAACTTGACCTGTATATTAATCTGTACCCTAGTTATGTTCGGTTCAT
CTGAG
■■Homology search results ■■ -
sp_hit_id Q9ER58
Definition sp|Q9ER58|TICN2_MOUSE Testican-2 OS=Mus musculus
Align length 35
Score (bit) 32.3
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946966|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_F08, 5'
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ER58|TICN2_MOUSE Testican-2 OS=Mus musculus GN=Spock2 PE=2 ... 32 1.5
sp|B1XLW1|Y2658_SYNP2 PKHD-type hydroxylase SYNPCC7002_A2658 OS=... 31 3.4
sp|Q92563|TICN2_HUMAN Testican-2 OS=Homo sapiens GN=SPOCK2 PE=1 ... 31 3.4
sp|Q6Q760|NALCN_RAT Sodium leak channel non-selective protein OS... 30 7.6
sp|Q8BXR5|NALCN_MOUSE Sodium leak channel non-selective protein ... 30 7.6
sp|Q8IZF0|NALCN_HUMAN Sodium leak channel non-selective protein ... 30 7.6
sp|Q9UPW0|FOXJ3_HUMAN Forkhead box protein J3 OS=Homo sapiens GN... 30 7.6
sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protei... 30 9.9
sp|P08863|NO26B_SOYBN Nodulin-26B OS=Glycine max PE=2 SV=2 30 9.9

>sp|Q9ER58|TICN2_MOUSE Testican-2 OS=Mus musculus GN=Spock2 PE=2
SV=1
Length = 423

Score = 32.3 bits (72), Expect = 1.5
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3

Query: 306 QLEYRACRSSPQKEDRTEGPHPCPHKRFHQTLFDS 202
+LE +AC SS Q R EGP PCP ++ + DS
Sbjct: 160 KLEQQACLSSKQLAVRCEGPCPCPTEQSTASTTDS 194


>sp|B1XLW1|Y2658_SYNP2 PKHD-type hydroxylase SYNPCC7002_A2658
OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=SYNPCC7002_A2658 PE=3 SV=1
Length = 219

Score = 31.2 bits (69), Expect = 3.4
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3

Query: 117 RETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDEGPQFYPPSGANFYMPD 296
R T+N + G D + +F ++ E GE+V EG D + P+G P
Sbjct: 95 RHTDNALMNGMRSDVSFTLFLNEPSDY-----EGGELVIEGADSEQSYKLPAGTAIAYPS 149

Query: 297 T 299
T
Sbjct: 150 T 150


>sp|Q92563|TICN2_HUMAN Testican-2 OS=Homo sapiens GN=SPOCK2 PE=1
SV=1
Length = 424

Score = 31.2 bits (69), Expect = 3.4
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3

Query: 306 QLEYRACRSSPQKEDRTEGPHPCP 235
+LE +AC SS Q R EGP PCP
Sbjct: 160 KLEQQACLSSKQLAVRCEGPCPCP 183


>sp|Q6Q760|NALCN_RAT Sodium leak channel non-selective protein
OS=Rattus norvegicus GN=Nalcn PE=2 SV=1
Length = 1738

Score = 30.0 bits (66), Expect = 7.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1

Query: 85 RLHRRSPLLAH--AKRRTYRSRVMQRMLP*RYLLMIQKELYAIEQSLVKSFVRAWMRALS 258
RLH + H +YRS +++ L LL ++ Y IE+ + K +R W++
Sbjct: 1521 RLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCL 1580

Query: 259 SILLLGRTSTCPILELL 309
+ + +C I+ L
Sbjct: 1581 KRIRAKQQQSCSIIHSL 1597


>sp|Q8BXR5|NALCN_MOUSE Sodium leak channel non-selective protein
OS=Mus musculus GN=Nalcn PE=2 SV=2
Length = 1738

Score = 30.0 bits (66), Expect = 7.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1

Query: 85 RLHRRSPLLAH--AKRRTYRSRVMQRMLP*RYLLMIQKELYAIEQSLVKSFVRAWMRALS 258
RLH + H +YRS +++ L LL ++ Y IE+ + K +R W++
Sbjct: 1521 RLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCL 1580

Query: 259 SILLLGRTSTCPILELL 309
+ + +C I+ L
Sbjct: 1581 KRIRAKQQQSCSIIHSL 1597


>sp|Q8IZF0|NALCN_HUMAN Sodium leak channel non-selective protein
OS=Homo sapiens GN=NALCN PE=1 SV=1
Length = 1738

Score = 30.0 bits (66), Expect = 7.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1

Query: 85 RLHRRSPLLAH--AKRRTYRSRVMQRMLP*RYLLMIQKELYAIEQSLVKSFVRAWMRALS 258
RLH + H +YRS +++ L LL ++ Y IE+ + K +R W++
Sbjct: 1521 RLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCL 1580

Query: 259 SILLLGRTSTCPILELL 309
+ + +C I+ L
Sbjct: 1581 KRIRAKQQQSCSIIHSL 1597


>sp|Q9UPW0|FOXJ3_HUMAN Forkhead box protein J3 OS=Homo sapiens
GN=FOXJ3 PE=1 SV=1
Length = 622

Score = 30.0 bits (66), Expect = 7.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3

Query: 276 PQKEDRTEGPHPCPHKRFHQTLFDSIQFLLYHQQIPS-RQHPLHHP 142
PQ R+ PHP PH + H L H Q PS QH HHP
Sbjct: 391 PQHPQRS--PHPAPHPQQHSQLQSP------HPQHPSPHQHIQHHP 428


>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-H13 PE=2 SV=3
Length = 612

Score = 29.6 bits (65), Expect = 9.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3

Query: 3 MPCAKYQRNLQSQN-VVSSSRFTHSHIIKAAQTQSAPRARETENVSLKGDAEDAALKVF 176
+P +Q L ++N +++++ H+HI+K Q P A NV K A AL+VF
Sbjct: 3 IPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVF 61


>sp|P08863|NO26B_SOYBN Nodulin-26B OS=Glycine max PE=2 SV=2
Length = 219

Score = 29.6 bits (65), Expect = 9.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2

Query: 251 PSVLSSFWGELLHARYSSCCYPSSARRG 334
P+V +S G L H+ + SC YPS A G
Sbjct: 184 PNVATSPLGRLSHSIHESCVYPSGAESG 211


tr_hit_id A7P6B3
Definition tr|A7P6B3|A7P6B3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera
Align length 60
Score (bit) 56.6
E-value 8.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946966|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_F08, 5'
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P6B3|A7P6B3_VITVI Chromosome chr9 scaffold_7, whole genome ... 57 8e-07
tr|A5C676|A5C676_VITVI Putative uncharacterized protein OS=Vitis... 57 8e-07
tr|Q69Y53|Q69Y53_ORYSJ Os06g0193300 protein OS=Oryza sativa subs... 55 2e-06
tr|A3B979|A3B979_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|A2YA82|A2YA82_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|A9TQX1|A9TQX1_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06
tr|B7FMF3|B7FMF3_MEDTR Putative uncharacterized protein OS=Medic... 53 9e-06
tr|B6UGC8|B6UGC8_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05
tr|A9SQE0|A9SQE0_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05
tr|Q9LUL9|Q9LUL9_ARATH Genomic DNA, chromosome 3, P1 clone: MLN2... 52 3e-05
tr|A9NNE4|A9NNE4_PICSI Putative uncharacterized protein OS=Picea... 51 5e-05
tr|A9S8K3|A9S8K3_PHYPA Predicted protein OS=Physcomitrella paten... 50 6e-05
tr|A9TMJ3|A9TMJ3_PHYPA Predicted protein OS=Physcomitrella paten... 50 8e-05
tr|Q0DX03|Q0DX03_ORYSJ Os02g0782900 protein OS=Oryza sativa subs... 48 4e-04
tr|Q94HC7|Q94HC7_ORYSJ Putative uncharacterized protein OSJNBb00... 47 5e-04
tr|B8BGM6|B8BGM6_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04
tr|Q6K7E4|Q6K7E4_ORYSJ Putative uncharacterized protein OJ1311_D... 46 0.001
tr|A3AC06|A3AC06_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.89
tr|Q0SK68|Q0SK68_RHOSR Non-ribosomal peptide synthetase OS=Rhodo... 33 7.6
tr|A6UHC7|A6UHC7_SINMW Outer membrane autotransporter barrel dom... 33 7.6
tr|B6GD63|B6GD63_9ACTN Putative uncharacterized protein OS=Colli... 33 9.9

>tr|A7P6B3|A7P6B3_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034001001
PE=4 SV=1
Length = 105

Score = 56.6 bits (135), Expect = 8e-07
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = +3

Query: 168 KVFADDTKGIVCYRTESGEIVCEGMDEGPQFYPPSGANFYMPDTRAAAILPLLGEVMYEI 347
KVF D +KGIVCYR + GEIVCEG DEGP+ + Y P R A I+ LL + +I
Sbjct: 25 KVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLHHELQRKNYHP--RDAEIIDLLQQNWLQI 82


>tr|A5C676|A5C676_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043719 PE=4 SV=1
Length = 133

Score = 56.6 bits (135), Expect = 8e-07
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = +3

Query: 168 KVFADDTKGIVCYRTESGEIVCEGMDEGPQFYPPSGANFYMPDTRAAAILPLLGEVMYEI 347
KVF D +KGIVCYR + GEIVCEG DEGP+ + Y P R A I+ LL + +I
Sbjct: 53 KVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLHHELQRKNYHP--RDAEIIDLLQQNWLQI 110


>tr|Q69Y53|Q69Y53_ORYSJ Os06g0193300 protein OS=Oryza sativa subsp.
japonica GN=P0698A06.24 PE=2 SV=1
Length = 127

Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +3

Query: 84 KAAQTQSAPRARETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDEGPQ 257
KAA AP T + L A A KVF D +GIVCYR + GE+VCEG DEGP+
Sbjct: 23 KAALRFRAPAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPR 80


>tr|A3B979|A3B979_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_019601 PE=4 SV=1
Length = 133

Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +3

Query: 84 KAAQTQSAPRARETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDEGPQ 257
KAA AP T + L A A KVF D +GIVCYR + GE+VCEG DEGP+
Sbjct: 23 KAALRFRAPAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPR 80


>tr|A2YA82|A2YA82_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21995 PE=4 SV=1
Length = 128

Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +3

Query: 84 KAAQTQSAPRARETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDEGPQ 257
KAA AP T + L A A KVF D +GIVCYR + GE+VCEG DEGP+
Sbjct: 24 KAALRFRAPAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPR 81


>tr|A9TQX1|A9TQX1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_171438 PE=4 SV=1
Length = 153

Score = 54.7 bits (130), Expect = 3e-06
Identities = 30/86 (34%), Positives = 44/86 (51%)
Frame = +3

Query: 9 CAKYQRNLQSQNVVSSSRFTHSHIIKAAQTQSAPRARETENVSLKGDAEDAALKVFADDT 188
CA ++ S+N S R ++ + S RA + V G + VF D++
Sbjct: 12 CASPPISISSRNPPPSQRLATVKMVPKSLRLSICRA--SSEVGPAGVIPEKESTVFKDES 69

Query: 189 KGIVCYRTESGEIVCEGMDEGPQFYP 266
+GI+CY E+G+I CEG DEGP F P
Sbjct: 70 QGIICYYDENGDITCEGWDEGPHFQP 95


>tr|B7FMF3|B7FMF3_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 133

Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3

Query: 105 APRARETEN-VSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDEGPQFYPPSGAN 281
AP+ + T V LK A V+ D+++GI+CY+ ESGEI+CEG DEGP + S
Sbjct: 35 APKKKSTVGPVLLKITASIKNKVVYEDESQGIICYQDESGEIICEGYDEGPSYRQISRPT 94

Query: 282 FYMPDTRAAAIL 317
+ D +L
Sbjct: 95 HHQRDVEIVNLL 106


>tr|B6UGC8|B6UGC8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 130

Score = 52.8 bits (125), Expect = 1e-05
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3

Query: 3 MPCAKYQRNLQSQNVVSSSRFTHSHI-IKAAQTQSAPRARETENVSLKGDAEDAALKVFA 179
M C +Y ++ + +SR T + I S+ +++ +VS G A KV+
Sbjct: 6 MRCYRYSPSVAMVPMRKTSRTTMTRASISTDGCSSSEPKKKSHSVSFAGKAN----KVYE 61

Query: 180 DDTKGIVCYRTESGEIVCEGMDEGPQ 257
D GI+CY E+GE+VCEG+DEGP+
Sbjct: 62 DKDMGILCYTDENGELVCEGLDEGPR 87


>tr|A9SQE0|A9SQE0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_82514 PE=4 SV=1
Length = 104

Score = 52.0 bits (123), Expect = 2e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3

Query: 138 LKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDEGPQFYPPSGANFYM 290
+K + +VF D++ GIVCY E GEI CEG DEGP F P + M
Sbjct: 9 MKNSHRNLPEQVFKDESNGIVCYVNEDGEITCEGWDEGPHFIPEPEKGYTM 59


>tr|Q9LUL9|Q9LUL9_ARATH Genomic DNA, chromosome 3, P1 clone: MLN21
(Putative uncharacterized protein At3g14280) (At3g14280)
OS=Arabidopsis thaliana GN=At3g14280 PE=2 SV=1
Length = 141

Score = 51.6 bits (122), Expect = 3e-05
Identities = 31/110 (28%), Positives = 53/110 (48%)
Frame = +3

Query: 24 RNLQSQNVVSSSRFTHSHIIKAAQTQSAPRARETENVSLKGDAEDAALKVFADDTKGIVC 203
+ ++++ ++ H + KA +Q P T+N+ VF D +GI+C
Sbjct: 19 KTVRAKTLMLQQSQVHVKVKKATVSQPQPIRYSTKNI------------VFEDPIQGIIC 66

Query: 204 YRTESGEIVCEGMDEGPQFYPPSGANFYMPDTRAAAILPLLGEVMYEI*D 353
Y ++GE++CEG DEGP+ P+ + +R IL LL E+ D
Sbjct: 67 YTDDNGEVICEGYDEGPRC--PTQSPMVASYSREVEILDLLQRSYQELSD 114