DK946969
Clone id YMU02A01NGRL0014_F14
Library
Length 352
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_F14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TTACGACATAGTCTAGTTGAAGCTGAGCTGGCTCCTCCAGTGAGCAGGGCTGTCTGAATG
TGCAAGCAATCAGGTTGCCGTATTCCATTTATTCTGCTTGGTCCGCAGGACAAATTGATG
TACATTGTGGTTGGTTTGACTACAAGTATCACTATCCGGCAAACAGCTGGATAAAGTGAG
AGCTTGATAAAGTAAGTGTGCTAAGCACTATGAACAATTCCCCCTGCCTTGAGTGAGGGG
TGACCAATACCCCTTGCCTGAGTCAGGGGTTCACAATATTCATGTATTTATTTGTATAGA
AAAGTATATCAATCTTGTTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q3C1V9
Definition sp|Q3C1V9|YK041_HUMAN Putative uncharacterized protein ENSP00000334305 OS=Homo sapiens
Align length 40
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946969|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_F14, 5'
(323 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3C1V9|YK041_HUMAN Putative uncharacterized protein ENSP00000... 31 1.7
sp|A3N2H4|FRDD_ACTP2 Fumarate reductase subunit D OS=Actinobacil... 31 1.7
sp|Q6MTR3|SYD_MYCMS Aspartyl-tRNA synthetase OS=Mycoplasma mycoi... 30 2.8
sp|Q48979|SYD_MYCCT Aspartyl-tRNA synthetase OS=Mycoplasma capri... 30 2.8
sp|P59844|FRDD_HAEDU Fumarate reductase subunit D OS=Haemophilus... 30 4.8

>sp|Q3C1V9|YK041_HUMAN Putative uncharacterized protein
ENSP00000334305 OS=Homo sapiens PE=5 SV=2
Length = 767

Score = 31.2 bits (69), Expect = 1.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3

Query: 42 EQGCLNVQAIRLPYSIYSAWSAGQIDVHCGWFDYKYHYPA 161
EQ C Q + LP +I +W G I GW +K H A
Sbjct: 674 EQSC---QTLALPMTIRHSWEGGAIRESSGWVSWKCHLKA 710


>sp|A3N2H4|FRDD_ACTP2 Fumarate reductase subunit D OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=frdD PE=3
SV=1
Length = 114

Score = 31.2 bits (69), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3

Query: 75 LPYSIYSAWSAGQIDVHCGWFDYKYHYPANSWI 173
L +I+ W AG VH G D K H+PA W+
Sbjct: 64 LAVTIFPMW-AGMHRVHHGLHDLKIHFPAGGWV 95


>sp|Q6MTR3|SYD_MYCMS Aspartyl-tRNA synthetase OS=Mycoplasma mycoides
subsp. mycoides SC GN=aspS PE=3 SV=1
Length = 574

Score = 30.4 bits (67), Expect = 2.8
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3

Query: 111 QIDVHCGWF--DYKYHYPANSWIK*ELDKVSVLSTMNNS 221
Q++ + GWF YKY P ++ I LD++S++ T +NS
Sbjct: 498 QVETNFGWFMNAYKYGAPYHAGIAWGLDRISMIVTDSNS 536


>sp|Q48979|SYD_MYCCT Aspartyl-tRNA synthetase OS=Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC 27343 / NCTC 10154) GN=aspS PE=3 SV=2
Length = 575

Score = 30.4 bits (67), Expect = 2.8
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3

Query: 111 QIDVHCGWF--DYKYHYPANSWIK*ELDKVSVLSTMNNS 221
Q++ + GWF YKY P ++ I LD++S++ T +NS
Sbjct: 499 QVEANFGWFMNAYKYGAPYHAGIAWGLDRISMILTDSNS 537


>sp|P59844|FRDD_HAEDU Fumarate reductase subunit D OS=Haemophilus
ducreyi GN=frdD PE=3 SV=1
Length = 114

Score = 29.6 bits (65), Expect = 4.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3

Query: 75 LPYSIYSAWSAGQIDVHCGWFDYKYHYPANSWI 173
L +I+ W AG VH G D K H PA+ W+
Sbjct: 64 LAVTIFPMW-AGMHRVHHGLHDLKIHLPASGWL 95


tr_hit_id B0D3C9
Definition tr|B0D3C9|B0D3C9_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 21
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946969|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_F14, 5'
(323 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0D3C9|B0D3C9_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.2

>tr|B0D3C9|B0D3C9_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_315857 PE=4 SV=1
Length = 1288

Score = 32.7 bits (73), Expect = 9.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3

Query: 108 GQIDVHCGWFDYKYHYPANSW 170
G +DVH W ++Y YPA SW
Sbjct: 930 GFVDVHAHWNGFEYRYPAKSW 950