DK946985
Clone id YMU02A01NGRL0014_G08
Library
Length 200
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_G08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAGCACTACCATTCCCTAGTGTAGATCTTCCTGTAACCTTCCATGTGCTGTAATTATATT
CGAGGCTAAGTCATGACGTCTCTTCTTCAATTTGTGACGTCCCCATAATTAAACTGTGCC
TCCAACTATTCTGTGAGATATATTTTGCTGGGGAAGAGGAGGCTTTGCATAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P26952
Definition sp|P26952|IL3RA_MOUSE Interleukin-3 receptor class 2 alpha chain OS=Mus musculus
Align length 41
Score (bit) 28.9
E-value 8.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946985|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G08, 5'
(170 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P26952|IL3RA_MOUSE Interleukin-3 receptor class 2 alpha chain... 29 8.3

>sp|P26952|IL3RA_MOUSE Interleukin-3 receptor class 2 alpha chain
OS=Mus musculus GN=Il3ra PE=2 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2

Query: 169 CKASSSPAKYISQNSWRHSLIMGTSQIEEETS*LSLEYNYS 47
C S + A+++++N + H L+ T Q+ + + EYN S
Sbjct: 245 CNGSEAHARWVARNRFHHGLLGYTLQVNQSSRSEPQEYNVS 285


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946985|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G08, 5'
(170 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******