DK946992
Clone id YMU02A01NGRL0014_G17
Library
Length 240
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_G17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TTACGGAATTGTGCCAGGACTCACGTAAGTCTCGCTATGGCCTCAGATGTTTTTGACGAA
TTCACTCAAGCTTCCTCTGAGCTGTTTGACATCTGTGTAGGGAGTGGACTGAGTTCTTTA
CCAAGTTTTCCTGATTGACCTCAGTTTGTGTACTTGTTTTCAGAGTTACATTGCCAATTG
CCTCCTATAACTGTGGATTAAATGCATGCCTAANAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A3CPJ7
Definition sp|A3CPJ7|YABA_STRSV Initiation-control protein yabA OS=Streptococcus sanguinis (strain SK36)
Align length 40
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946992|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G17, 5'
(211 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A3CPJ7|YABA_STRSV Initiation-control protein yabA OS=Streptoc... 30 3.7

>sp|A3CPJ7|YABA_STRSV Initiation-control protein yabA
OS=Streptococcus sanguinis (strain SK36) GN=SSA_1720
PE=3 SV=1
Length = 105

Score = 30.0 bits (66), Expect = 3.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1

Query: 208 HAFNPQL*EAIGNVTLKTSTQTEVNQENLVKNSVHSLHRC 89
H N +L E +G V +T T+T+ N++NL K H C
Sbjct: 42 HLENDKLRERLGEVEKETPTKTKKNRDNLRKLYYDGFHVC 81


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946992|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G17, 5'
(211 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******