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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946996
Clone id YMU02A01NGRL0014_G22
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_G22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCGCCCTCTCCAATGGCAGCCGCATCAGCGCCATGCTGGTGTGGAAGCCGTACGACAACA
AGAAGTTTGAGACTCTGTCATATCTGCCGCAGCTGAGTAGCGAGCAGATAGCAAAGCAGG
TGGACTACATGGTGCGACAGAACTTTACCCCCTGCATCGAGTTCGACAACATTGGGAGCG
TGTACCGGGAGCACTTCCACGGGAGCGGGTACTACGATGGGAGGTACTGGGTGATGTGGA
AGCTGCCCATGTTTGGCTGCACCGACTCTGCCGCCGTTCTGCGAGAGATTACTGAGTGCG
CCAAGGAGTATCCCAAGGCCTTCATCCGGGTGCTTGGCTTCGATGCCAAGCGCCAGGTCC
AGGTTGCTGGCTTCCTCGTCCAGAGGCCTGGCCAGTAACCTCATCTGAGTTACTCCTTGG
GAGACATTGATCACAATAATTTGGAAGGCAAATCGCCCTTGCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q96542
Definition sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa
Align length 128
Score (bit) 180.0
E-value 2.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946996|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G22, 5'
         (462 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   180   2e-45
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   178   1e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   176   3e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   176   4e-44
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   176   6e-44
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   176   6e-44
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   174   1e-43
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   174   2e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   174   2e-43
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   172   5e-43
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   171   1e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   171   1e-42
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   171   1e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   171   1e-42
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   171   1e-42
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   171   1e-42
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   171   2e-42
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   170   3e-42
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha...   170   3e-42
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   170   3e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   169   4e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   169   4e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   169   4e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   169   4e-42
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   169   4e-42
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   169   4e-42
sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small cha...   169   5e-42
sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small cha...   169   5e-42
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   168   9e-42

>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  180 bits (457), Expect = 2e-45
 Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+  M VW P   KKFETLSYLP LSSEQ+AK+VDY++R+N  PC+EF+   G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH    GYYDGRYW MWKLPMFGC DS+ VL+E+ EC K YP AFIR++GFD KRQVQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 172 ISFIAYKP 179


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  178 bits (451), Expect = 1e-44
 Identities = 79/128 (61%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+  M VW P   KK+ETLSYLP LS E ++K++DY++R  + PC+EF+   G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH H  GYYDGRYW MWKLPMFGCTDSA V++E+ EC KEYP AFIRV+GFD  RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169

Query: 366 AGFLVQRP 389
             F+V +P
Sbjct: 170 ISFIVAKP 177


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  177 bits (448), Expect = 3e-44
 Identities = 76/127 (59%), Positives = 98/127 (77%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 188
           SNGSR+  M VW PY NKKFETLSYLP+L+ EQ+ K+V+Y+++  + PC+EF+  G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 189 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 368
            + +  GYYDGRYWVMWKLPMFGCT+++ VL E+ ECAK YP AFIRV+GFD  RQVQ  
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 369 GFLVQRP 389
            F+V +P
Sbjct: 180 SFIVHKP 186


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  176 bits (447), Expect = 3e-44
 Identities = 77/128 (60%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R++ M VW P   KKFETLSYLP L+  ++AK+VDY++R  + PC+EF+   G VY
Sbjct: 48  SNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVY 107

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH +  GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP AFIR++GFD  RQVQ 
Sbjct: 108 REHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQC 167

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 168 ISFIAYKP 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  176 bits (446), Expect = 4e-44
 Identities = 76/127 (59%), Positives = 97/127 (76%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 188
           SNG R+  M VW P+ N KFETLSYLP L+ EQ+ K+V+Y++R  + PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 189 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 368
           ++    GYYDGRYWVMWKLPMFGCT+++ V+ E+ ECAK YPKAFIRV+GFD  RQVQ  
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 369 GFLVQRP 389
            F+V +P
Sbjct: 164 SFIVHKP 170


>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain
           3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B
           PE=1 SV=2
          Length = 181

 Score =  176 bits (445), Expect = 6e-44
 Identities = 79/128 (61%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+S M VW P   KKFETLSYLP LS  ++AK+VDY++R  + PC+EF+   G VY
Sbjct: 48  SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH +  GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP AFIR++GFD  RQVQ 
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQC 167

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 168 ISFIAYKP 175


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
           2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
           PE=2 SV=2
          Length = 181

 Score =  176 bits (445), Expect = 6e-44
 Identities = 79/128 (61%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+S M VW P   KKFETLSYLP LS  ++AK+VDY++R  + PC+EF+   G VY
Sbjct: 48  SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH +  GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP AFIR++GFD  RQVQ 
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQC 167

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 168 ISFIAYKP 175


>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain
           1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B
           PE=1 SV=1
          Length = 181

 Score =  174 bits (442), Expect = 1e-43
 Identities = 78/128 (60%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+S M VW P   KKFETLSYLP L+  ++AK+VDY++R  + PC+EF+   G VY
Sbjct: 48  SNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH +  GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP AFIR++GFD  RQVQ 
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQC 167

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 168 ISFIAYKP 175


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  174 bits (441), Expect = 2e-43
 Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 188
           +NGSR+S M VW+PY+N KFETLSYLP LS + +AKQ+DY+++  + PCIEFD  G+V R
Sbjct: 51  TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 189 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY-PKAFIRVLGFDAKRQVQV 365
           E     GYYDGRYW MWKLPMFGCTDSA+VLREI EC K Y  K +IR LGFD  RQVQ 
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQC 170

Query: 366 AGFLVQRP 389
           A F+V +P
Sbjct: 171 ASFIVHQP 178


>sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1
          Length = 181

 Score =  174 bits (440), Expect = 2e-43
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+S M VW P   KKFETLSYLP LS  ++AK+VDY++R  + PC+EF+   G VY
Sbjct: 48  SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH    GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP A IR++GFD  RQVQ 
Sbjct: 108 REHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQC 167

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 168 ISFIAYKP 175
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 131
Score (bit) 246.0
E-value 3.0e-64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946996|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G22, 5'
         (462 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   246   3e-64
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   190   3e-47
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   189   6e-47
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   188   1e-46
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   187   2e-46
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   187   2e-46
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   187   2e-46
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   180   3e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   179   6e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   177   2e-43
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   177   2e-43
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   177   2e-43
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   177   2e-43
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   177   2e-43
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   176   4e-43
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   176   4e-43
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...   176   4e-43
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...   176   4e-43
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   175   9e-43
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   175   9e-43
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar...   174   3e-42
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   173   4e-42
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   173   4e-42
tr|Q42900|Q42900_LARLA Ribulose bisphosphate carboxylase small c...   172   6e-42
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   172   6e-42
tr|Q9AQX3|Q9AQX3_FLAPA Ribulose bisphosphate carboxylase small c...   172   7e-42
tr|Q84NG5|Q84NG5_FLABI Ribulose bisphosphate carboxylase small c...   172   7e-42
tr|Q84NG4|Q84NG4_FLABI Ribulose bisphosphate carboxylase small c...   172   7e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  246 bits (629), Expect = 3e-64
 Identities = 113/131 (86%), Positives = 124/131 (94%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           A+SNGSRISAMLVWKPYDNKKFETLSYLP L+++QIAKQV+YMVR+ +TPCIEFD IGSV
Sbjct: 44  AISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSV 103

Query: 183 YREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQ 362
           YREHFHGSGYYDGRYW+MWKLPMFGCTDS +VLREI ECAKEYP AFIRVLGFDAKRQVQ
Sbjct: 104 YREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQ 163

Query: 363 VAGFLVQRPGQ 395
           VAGFLV++P Q
Sbjct: 164 VAGFLVKKPSQ 174


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  190 bits (483), Expect = 3e-47
 Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           A+ NGSR+  M VW P    KFET SYLP L+ +QIAKQVDYM++QN  PCIEFD +GSV
Sbjct: 52  AVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSV 111

Query: 183 YREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKR 353
            R +F G   SGYYDGRYW MWKLPMFGCTDS+ VLREI EC  ++P  ++RVLGFD+K+
Sbjct: 112 SRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKK 171

Query: 354 QVQVAGFLVQRP 389
           QVQ+ GFLV RP
Sbjct: 172 QVQICGFLVSRP 183


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  189 bits (480), Expect = 6e-47
 Identities = 85/132 (64%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           ++ NGSR+  M VW P    KFET SYLP L+ +QIAKQVDYM++QN  PCIEFD +GSV
Sbjct: 82  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSV 141

Query: 183 YREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKR 353
            R +F G   SGYYDGRYW MWKLPMFGCTDS+ VLREI EC  ++P  ++RVLGFD+K+
Sbjct: 142 SRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKK 201

Query: 354 QVQVAGFLVQRP 389
           QVQ+ GFLV RP
Sbjct: 202 QVQICGFLVSRP 213


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  188 bits (477), Expect = 1e-46
 Identities = 85/132 (64%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           ++ NGSR+  M VW P    KFET SYLP LS +QIA+QVDYM++QN  PCIEFD +G+V
Sbjct: 52  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAV 111

Query: 183 YREHFHGSG---YYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKR 353
            R +F GSG   YYDGRYW MWKLPMFGCTDS+ VLREI EC   YP  ++RVLGFD+K+
Sbjct: 112 SRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKK 171

Query: 354 QVQVAGFLVQRP 389
           QVQ+ GFLV RP
Sbjct: 172 QVQICGFLVARP 183


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  187 bits (476), Expect = 2e-46
 Identities = 84/132 (63%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           ++ NGSR+  M VW P    KFET SYLP L+ ++IAKQVDYM++QN  PCIEFD +GSV
Sbjct: 51  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSV 110

Query: 183 YREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKR 353
            R +F G   SGYYDGRYW MWKLPMFGCTDS+ VLREI EC  ++P  ++RVLGFD+K+
Sbjct: 111 SRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKK 170

Query: 354 QVQVAGFLVQRP 389
           QVQ+ GFLV RP
Sbjct: 171 QVQICGFLVSRP 182


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  187 bits (476), Expect = 2e-46
 Identities = 85/132 (64%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           ++ NGSR+  M VW P    KFET SYLP L+ +QIAKQVD+M++QN  PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 183 YREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKR 353
            R +F G   SGYYDGRYW MWKLPMFGCTDSA VLREI EC + +P  ++RVLGFD+K+
Sbjct: 107 SRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKK 166

Query: 354 QVQVAGFLVQRP 389
           QVQ+ GFLV RP
Sbjct: 167 QVQICGFLVARP 178


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  187 bits (476), Expect = 2e-46
 Identities = 85/132 (64%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   ALSNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSV 182
           ++ NGSR+  M VW P    KFET SYLP L+ +QIAKQVD+M++QN  PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 183 YREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKR 353
            R +F G   SGYYDGRYW MWKLPMFGCTDSA VLREI EC + +P  ++RVLGFD+K+
Sbjct: 107 SRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKK 166

Query: 354 QVQVAGFLVQRP 389
           QVQ+ GFLV RP
Sbjct: 167 QVQICGFLVARP 178


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  180 bits (457), Expect = 3e-44
 Identities = 79/128 (61%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+  M VW P   KK+ETLSYLP LS E ++K++DY++R  + PC+EF+   G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH H  GYYDGRYW MWKLPMFGCTDSA V++E+ EC KEYP AFIRV+GFD+ RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQC 169

Query: 366 AGFLVQRP 389
             F+V +P
Sbjct: 170 ISFIVSKP 177


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  179 bits (454), Expect = 6e-44
 Identities = 79/128 (61%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 185
           SNG R+  M VW P   KKFETLSYLPQL+ EQ++K+VDY++R  + PC+EF+   G VY
Sbjct: 51  SNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVY 110

Query: 186 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 365
           REH H  GYYDGRYW MWKLPMFGCTDS+ VL+E+ EC KEYP A+IR++GFD  RQVQ 
Sbjct: 111 REHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQC 170

Query: 366 AGFLVQRP 389
             F+  +P
Sbjct: 171 ISFIAFKP 178


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
           chain OS=Picea sitchensis PE=2 SV=1
          Length = 159

 Score =  177 bits (450), Expect = 2e-43
 Identities = 77/127 (60%), Positives = 98/127 (77%)
 Frame = +3

Query: 9   SNGSRISAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 188
           SNG R+  M VW PY+N KFETLSYLP+L+ EQ+ K+V+Y++R  + PC+EFD  G + R
Sbjct: 30  SNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKR 89

Query: 189 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 368
           ++    GYYDGRYWVMWKLPMFGCT+++ VL E+ ECAK YPKAFIRV+GFD  RQVQ  
Sbjct: 90  KYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCI 149

Query: 369 GFLVQRP 389
            F+V +P
Sbjct: 150 SFIVHKP 156