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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947000
Clone id YMU02A01NGRL0014_H02
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_H02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTTGTTCACTCTGTGCACAGATCTGCTTAGCCAGCTCAACTTGTGTCCTCTCCAACTCCT
ACTTTCATCTTTCCTTCCGGCATGGCTGCCTCCGCCACATGCAGCGTCCCCATCAGAATG
ATTGGCATGCCTTGCGCTAAATATCAAAGAAATCTCCAGTCCCAGAATGTAGTCTCGTCC
TCTCGATTCACCCACAGCCACATCATTAAGGCTGCACAGACGCAGTCCGCTCCTCGCACA
CGCGAAACGGAGAACGTATCGCTCAAGGGTGATGCAGAGGATGCTGCCTTGAAGGTATTT
GCTGATGATACAAAAGGAATTGTATGCTATCGAACAGAGTCTGGTGAAATCGTTTGTGAG
GGCATGGATGATGGCCCTCAGTTCTATCCTCCTTCTGGGGCGAACTTCTACATGCCCGAT
ACTCGAGCTGCTGCTATCCTTCCTCTGCTAGGAGAGGTTATGTATGAAATCTAAGATTAC
AAAGGCGTCGTGGGCTTTTCTTGTTCTTCAAGATAAGCATAAGCTTTTGCGAACTTGATG
ATGTGGGGAGTAGTTGTAATCCAGAGTAAGCAAAGGTTAATTCACTTATAGAGAGATTAT
TATCTTA
■■Homology search results ■■ -
sp_hit_id Q02930
Definition sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 OS=Homo sapiens
Align length 43
Score (bit) 32.3
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947000|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_H02, 5'
         (607 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ...    32   1.9  
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    32   2.5  
sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 OS=Homo sap...    32   3.3  
sp|B1XLW1|Y2658_SYNP2 PKHD-type hydroxylase SYNPCC7002_A2658 OS=...    31   4.3  
sp|Q46078|KPYK_CORGL Pyruvate kinase OS=Corynebacterium glutamic...    31   5.6  
sp|A6VQ42|RNFC_ACTSZ Electron transport complex protein rnfC OS=...    30   7.4  
sp|A0L0R3|PANC_SHESA Pantothenate synthetase OS=Shewanella sp. (...    30   9.6  
sp|Q8FP04|KPYK_COREF Pyruvate kinase OS=Corynebacterium efficien...    30   9.6  

>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
           OS=Homo sapiens GN=CREB5 PE=1 SV=2
          Length = 508

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 394 KEDRTEGHHPCPHKRFHQTLFDSIQFLLYHQQIPSRQHPLHHP 266
           ++D+T  HH   H   HQTL        +H      QHP HHP
Sbjct: 265 RQDQTPHHHMHSHPHQHQTLPP------HHPYPHQHQHPAHHP 301


>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
           OS=Mus musculus GN=Creb5 PE=2 SV=3
          Length = 357

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 394 KEDRTEGHHPCPHKRFHQTLFDSIQFLLYHQQIPSRQHPLHHP 266
           ++D+T  HH   H   HQTL        +H      QHP HHP
Sbjct: 114 RQDQTPHHHLHSHPHQHQTLPP------HHPYPHQHQHPAHHP 150


>sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 OS=Homo
           sapiens GN=ZMYM5 PE=1 SV=4
          Length = 669

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = +3

Query: 45  VLSNSYFHLSFRHGCLRHMQRPHQNDWHALR*ISKKSPVPECSLVLSIHPQPHH*GCTDA 224
           V S+  F   +   CL     P +N+W+  + +  KS    CS +  I  +      T  
Sbjct: 304 VESSKSFQEFYSTSCLS----PCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHK 359

Query: 225 VRSSHTRNGERIAQG*CRGCC 287
           + S+H  N  R+A G    CC
Sbjct: 360 LCSNHCFNKYRLANGLIMNCC 380


>sp|B1XLW1|Y2658_SYNP2 PKHD-type hydroxylase SYNPCC7002_A2658
           OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
           PR-6) GN=SYNPCC7002_A2658 PE=3 SV=1
          Length = 219

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +1

Query: 241 RETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQFYPPSGANFYMPD 420
           R T+N  + G   D +  +F ++         E GE+V EG D    +  P+G     P 
Sbjct: 95  RHTDNALMNGMRSDVSFTLFLNEPSDY-----EGGELVIEGADSEQSYKLPAGTAIAYPS 149

Query: 421 T 423
           T
Sbjct: 150 T 150


>sp|Q46078|KPYK_CORGL Pyruvate kinase OS=Corynebacterium glutamicum
           GN=pyk PE=1 SV=1
          Length = 475

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +1

Query: 238 TRETENVSLKGDAEDAAL--KVFADDTK-GIVCYRTESGEIVCEGMDDGP 378
           T +  + + K  A+DA    ++  DD K G+VC   E  +++CE ++ GP
Sbjct: 101 THDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGGP 150


>sp|A6VQ42|RNFC_ACTSZ Electron transport complex protein rnfC
           OS=Actinobacillus succinogenes (strain ATCC 55618 /
           130Z) GN=rnfC PE=3 SV=1
          Length = 703

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 29/101 (28%), Positives = 44/101 (43%)
 Frame = +1

Query: 136 AKYQRNLQSQNVVSSSRFTHSHIIKAAQTQSAPRTRETENVSLKGDAEDAALKVFADDTK 315
           A+ Q N  S   VSS+  + S  I A  T S P+T + +      D + AA+ V     K
Sbjct: 554 ARQQTNGNSP--VSSASNSDSATISADNTHSTPKTAQNQTAP---DPKKAAVAVAIARAK 608

Query: 316 GIVCYRTESGEIVCEGMDDGPQFYPPSGANFYMPDTRAAAI 438
                +T +GE V E + +       +  N   PD + AA+
Sbjct: 609 AKKAAQTTTGETVTENVTE------KTAQNPTAPDPKKAAV 643


>sp|A0L0R3|PANC_SHESA Pantothenate synthetase OS=Shewanella sp.
           (strain ANA-3) GN=panC PE=3 SV=1
          Length = 281

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 34  AQLVSSPTPTFIFPSGMAASATCSVP 111
           A+L+ +PTPT I+P G+A      VP
Sbjct: 87  AELLFTPTPTVIYPKGLAQQTYVEVP 112


>sp|Q8FP04|KPYK_COREF Pyruvate kinase OS=Corynebacterium efficiens
           GN=pyk PE=3 SV=2
          Length = 474

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 238 TRETENVSLKGDAEDAAL--KVFADDTK-GIVCYRTESGEIVCEGMDDGP 378
           T +  + + K  A+DA    ++  DD K G+VC   E  +++CE  + GP
Sbjct: 101 THDRVSTTYKNLAKDARPGDRLLVDDGKVGLVCVSVEGNDVICEVTEGGP 150
tr_hit_id A7P6B3
Definition tr|A7P6B3|A7P6B3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera
Align length 60
Score (bit) 55.5
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947000|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_H02, 5'
         (607 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P6B3|A7P6B3_VITVI Chromosome chr9 scaffold_7, whole genome ...    55   2e-06
tr|A5C676|A5C676_VITVI Putative uncharacterized protein OS=Vitis...    55   2e-06
tr|Q69Y53|Q69Y53_ORYSJ Os06g0193300 protein OS=Oryza sativa subs...    54   7e-06
tr|A3B979|A3B979_ORYSJ Putative uncharacterized protein OS=Oryza...    54   7e-06
tr|A2YA82|A2YA82_ORYSI Putative uncharacterized protein OS=Oryza...    54   7e-06
tr|A9TQX1|A9TQX1_PHYPA Predicted protein OS=Physcomitrella paten...    52   2e-05
tr|Q9LUL9|Q9LUL9_ARATH Genomic DNA, chromosome 3, P1 clone: MLN2...    52   3e-05
tr|B7FMF3|B7FMF3_MEDTR Putative uncharacterized protein OS=Medic...    52   3e-05
tr|B6UGC8|B6UGC8_MAIZE Putative uncharacterized protein OS=Zea m...    52   3e-05
tr|A9SQE0|A9SQE0_PHYPA Predicted protein OS=Physcomitrella paten...    51   6e-05
tr|A9S8K3|A9S8K3_PHYPA Predicted protein OS=Physcomitrella paten...    51   6e-05
tr|A9NNE4|A9NNE4_PICSI Putative uncharacterized protein OS=Picea...    50   1e-04
tr|A9TMJ3|A9TMJ3_PHYPA Predicted protein OS=Physcomitrella paten...    49   2e-04
tr|Q0DX03|Q0DX03_ORYSJ Os02g0782900 protein OS=Oryza sativa subs...    47   0.001
tr|Q94HC7|Q94HC7_ORYSJ Putative uncharacterized protein OSJNBb00...    46   0.001
tr|B8BGM6|B8BGM6_ORYSI Putative uncharacterized protein OS=Oryza...    46   0.001
tr|Q6K7E4|Q6K7E4_ORYSJ Putative uncharacterized protein OJ1311_D...    45   0.004
tr|A3AC06|A3AC06_ORYSJ Putative uncharacterized protein OS=Oryza...    37   1.2  
tr|B0WC24|B0WC24_CULQU Putative uncharacterized protein OS=Culex...    36   2.0  
tr|A9RY66|A9RY66_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.8  
tr|Q1R1I9|Q1R1I9_CHRSD Putative hemagglutinin/hemolysin-related ...    33   9.8  
tr|A6UHC7|A6UHC7_SINMW Outer membrane autotransporter barrel dom...    33   9.8  
tr|B7RJS4|B7RJS4_9RHOB Conserved domain protein OS=Roseobacter s...    33   9.8  

>tr|A7P6B3|A7P6B3_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034001001
           PE=4 SV=1
          Length = 105

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +1

Query: 292 KVFADDTKGIVCYRTESGEIVCEGMDDGPQFYPPSGANFYMPDTRAAAILPLLGEVMYEI 471
           KVF D +KGIVCYR + GEIVCEG D+GP+ +       Y P  R A I+ LL +   +I
Sbjct: 25  KVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLHHELQRKNYHP--RDAEIIDLLQQNWLQI 82


>tr|A5C676|A5C676_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043719 PE=4 SV=1
          Length = 133

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +1

Query: 292 KVFADDTKGIVCYRTESGEIVCEGMDDGPQFYPPSGANFYMPDTRAAAILPLLGEVMYEI 471
           KVF D +KGIVCYR + GEIVCEG D+GP+ +       Y P  R A I+ LL +   +I
Sbjct: 53  KVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLHHELQRKNYHP--RDAEIIDLLQQNWLQI 110


>tr|Q69Y53|Q69Y53_ORYSJ Os06g0193300 protein OS=Oryza sativa subsp.
           japonica GN=P0698A06.24 PE=2 SV=1
          Length = 127

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +1

Query: 208 KAAQTQSAPRTRETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQ 381
           KAA    AP    T +  L   A  A  KVF D  +GIVCYR + GE+VCEG D+GP+
Sbjct: 23  KAALRFRAPAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPR 80


>tr|A3B979|A3B979_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_019601 PE=4 SV=1
          Length = 133

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +1

Query: 208 KAAQTQSAPRTRETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQ 381
           KAA    AP    T +  L   A  A  KVF D  +GIVCYR + GE+VCEG D+GP+
Sbjct: 23  KAALRFRAPAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPR 80


>tr|A2YA82|A2YA82_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21995 PE=4 SV=1
          Length = 128

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +1

Query: 208 KAAQTQSAPRTRETENVSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQ 381
           KAA    AP    T +  L   A  A  KVF D  +GIVCYR + GE+VCEG D+GP+
Sbjct: 24  KAALRFRAPAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPR 81


>tr|A9TQX1|A9TQX1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_171438 PE=4 SV=1
          Length = 153

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 28/86 (32%), Positives = 43/86 (50%)
 Frame = +1

Query: 133 CAKYQRNLQSQNVVSSSRFTHSHIIKAAQTQSAPRTRETENVSLKGDAEDAALKVFADDT 312
           CA    ++ S+N   S R     ++  +   S    R +  V   G   +    VF D++
Sbjct: 12  CASPPISISSRNPPPSQRLATVKMVPKSLRLSI--CRASSEVGPAGVIPEKESTVFKDES 69

Query: 313 KGIVCYRTESGEIVCEGMDDGPQFYP 390
           +GI+CY  E+G+I CEG D+GP F P
Sbjct: 70  QGIICYYDENGDITCEGWDEGPHFQP 95


>tr|Q9LUL9|Q9LUL9_ARATH Genomic DNA, chromosome 3, P1 clone: MLN21
           (Putative uncharacterized protein At3g14280) (At3g14280)
           OS=Arabidopsis thaliana GN=At3g14280 PE=2 SV=1
          Length = 141

 Score = 52.0 bits (123), Expect = 3e-05
 Identities = 36/132 (27%), Positives = 62/132 (46%)
 Frame = +1

Query: 82  MAASATCSVPIRMIGMPCAKYQRNLQSQNVVSSSRFTHSHIIKAAQTQSAPRTRETENVS 261
           MA S    +P++    PC    + ++++ ++      H  + KA  +Q  P    T+N+ 
Sbjct: 1   MAYSTKLYLPLKT---PCF-VPKTVRAKTLMLQQSQVHVKVKKATVSQPQPIRYSTKNI- 55

Query: 262 LKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQFYPPSGANFYMPDTRAAAIL 441
                      VF D  +GI+CY  ++GE++CEG D+GP+   P+ +      +R   IL
Sbjct: 56  -----------VFEDPIQGIICYTDDNGEVICEGYDEGPRC--PTQSPMVASYSREVEIL 102

Query: 442 PLLGEVMYEI*D 477
            LL     E+ D
Sbjct: 103 DLLQRSYQELSD 114


>tr|B7FMF3|B7FMF3_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 133

 Score = 52.0 bits (123), Expect = 3e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +1

Query: 229 APRTRETEN-VSLKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQFYPPSGAN 405
           AP+ + T   V LK  A      V+ D+++GI+CY+ ESGEI+CEG D+GP +   S   
Sbjct: 35  APKKKSTVGPVLLKITASIKNKVVYEDESQGIICYQDESGEIICEGYDEGPSYRQISRPT 94

Query: 406 FYMPDTRAAAIL 441
            +  D     +L
Sbjct: 95  HHQRDVEIVNLL 106


>tr|B6UGC8|B6UGC8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 130

 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +1

Query: 127 MPCAKYQRNLQSQNVVSSSRFTHSHI-IKAAQTQSAPRTRETENVSLKGDAEDAALKVFA 303
           M C +Y  ++    +  +SR T +   I      S+   +++ +VS  G A     KV+ 
Sbjct: 6   MRCYRYSPSVAMVPMRKTSRTTMTRASISTDGCSSSEPKKKSHSVSFAGKAN----KVYE 61

Query: 304 DDTKGIVCYRTESGEIVCEGMDDGPQ 381
           D   GI+CY  E+GE+VCEG+D+GP+
Sbjct: 62  DKDMGILCYTDENGELVCEGLDEGPR 87


>tr|A9SQE0|A9SQE0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_82514 PE=4 SV=1
          Length = 104

 Score = 50.8 bits (120), Expect = 6e-05
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +1

Query: 262 LKGDAEDAALKVFADDTKGIVCYRTESGEIVCEGMDDGPQFYPPSGANFYM 414
           +K    +   +VF D++ GIVCY  E GEI CEG D+GP F P     + M
Sbjct: 9   MKNSHRNLPEQVFKDESNGIVCYVNEDGEITCEGWDEGPHFIPEPEKGYTM 59