DK947004 |
Clone id |
YMU02A01NGRL0014_H07 |
Library |
YMU02 |
Length |
535 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_H07. 5' end sequence. |
Accession |
DK947004 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1736Contig1 |
Sequence |
AAGCAAGGCAGCGACAGCAAATATGGGCCTGTTTGGAGGATGGCGCAAGAAGAAAGCTTC CAAGGAGGGGGAAGCAGAGGGCGCTCCTGCAAACCCTAGTTCGACTGTCACTTCTAGCCA ACAGCAGCAGCAGCAGTCTCCTCCAGAGACGAGCGTTTTTGAGTTTGGCTCTGCAAGTGC AGCAGGTGAGGAGCGCCTAACAATTGCAGGATACTGCCCGGTGTCCAATGATCTGGAGCC TTGCCGCTGGGAGGTTTTGCCTGCACCTCCCCCTGATAACACTGCCCCCCTTTTTCGCAT CGTCTTCTGATTGGCATCCTAGACATAGTCCTGAAGGTTTTTCTTCTTGTTGTTTGCATA TCAACAGAACACAGAAAGGTAGCTTTGTCAACTTTCCTTTTTACCGAACCTCCTCCTCCT CTCATTGAAGAGAAAGGCTTCTGCTTTTTTGTTGGAGTGACAATGGTGTATGTGGAGAAC TGTGTGTTTAATTCCCTAATTTTTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9DAT2 |
Definition |
sp|Q9DAT2|MRGBP_MOUSE MRG-binding protein OS=Mus musculus |
Align length |
49 |
Score (bit) |
31.6 |
E-value |
2.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M1Z0 |
Definition |
tr|Q9M1Z0|Q9M1Z0_ARATH Allyl alcohol dehydrogenase-like protein OS=Arabidopsis thaliana |
Align length |
51 |
Score (bit) |
73.6 |
E-value |
5.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947004|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_H07, 5' (507 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M1Z0|Q9M1Z0_ARATH Allyl alcohol dehydrogenase-like protein ... 74 5e-12 tr|Q8VZ93|Q8VZ93_ARATH Allyl alcohol dehydrogenase-like protein ... 74 5e-12 tr|A5BJC2|A5BJC2_VITVI Putative uncharacterized protein (Chromos... 71 3e-11 tr|A9PBB4|A9PBB4_POPTR Putative uncharacterized protein OS=Popul... 70 6e-11 tr|A9NYN1|A9NYN1_PICSI Putative uncharacterized protein OS=Picea... 67 5e-10 tr|A3B5J7|A3B5J7_ORYSJ Putative uncharacterized protein OS=Oryza... 66 8e-10 tr|A2Y674|A2Y674_ORYSI Putative uncharacterized protein OS=Oryza... 66 8e-10 tr|B6T5A5|B6T5A5_MAIZE Allyl alcohol dehydrogenase-like protein ... 65 2e-09 tr|Q1EJK2|Q1EJK2_PICAB Putative allyl alcohol dehydrogenase-like... 61 3e-08 tr|A9SHA5|A9SHA5_PHYPA Predicted protein (Fragment) OS=Physcomit... 47 7e-04 tr|Q8LQJ5|Q8LQJ5_ORYSJ Putative uncharacterized protein B1151A10... 37 0.42 tr|Q5TKE5|Q5TKE5_ORYSJ Putative uncharacterized protein OSJNBa00... 37 0.42 tr|A2ZUM2|A2ZUM2_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.42 tr|Q60E41|Q60E41_ORYSJ cDNA clone:J013170B15, full insert sequen... 36 0.94 tr|A2Y1B6|A2Y1B6_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.94 tr|Q2LGZ8|Q2LGZ8_TRIMO Putative uncharacterized protein (Fragmen... 34 3.6 tr|B6TX37|B6TX37_MAIZE NDR1/HIN1-Like protein 2 OS=Zea mays PE=2... 34 3.6 tr|B4FUU9|B4FUU9_MAIZE Putative uncharacterized protein OS=Zea m... 34 3.6 tr|A3CG21|A3CG21_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.7 tr|A4I9Y9|A4I9Y9_LEIIN 8-oxoguanine DNA glycosylase, putative OS... 34 4.7 tr|Q8CCH4|Q8CCH4_MOUSE Putative uncharacterized protein OS=Mus m... 33 6.1 tr|Q8CAD4|Q8CAD4_MOUSE Putative uncharacterized protein OS=Mus m... 33 6.1 tr|Q3UF29|Q3UF29_MOUSE Putative uncharacterized protein OS=Mus m... 33 6.1 tr|Q75L54|Q75L54_ORYSJ Putative uncharacterized protein OSJNBa00... 33 6.1 tr|Q2QVH9|Q2QVH9_ORYSJ Putative uncharacterized protein OS=Oryza... 33 6.1 tr|B0X1V3|B0X1V3_CULQU Serotonin receptor OS=Culex quinquefascia... 33 6.1 tr|A4HTV3|A4HTV3_LEIIN Putative uncharacterized protein OS=Leish... 33 7.8 tr|Q94GT3|Q94GT3_ORYSA Putative uncharacterized protein OSJNBa00... 33 8.0 tr|Q7XGM7|Q7XGM7_ORYSJ Putative uncharacterized protein (Putativ... 33 8.0 tr|B7ZXT7|B7ZXT7_MAIZE Putative uncharacterized protein OS=Zea m... 33 8.0
>tr|Q9M1Z0|Q9M1Z0_ARATH Allyl alcohol dehydrogenase-like protein OS=Arabidopsis thaliana GN=F24G16.110 PE=4 SV=1 Length = 462
Score = 73.6 bits (179), Expect = 5e-12 Identities = 35/51 (68%), Positives = 42/51 (82%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGS +A G+ R+T+AGYCPVS+DLEPCRWE+LPA D AP FR+VF Sbjct: 415 VFEFGSVAATGD-RVTLAGYCPVSDDLEPCRWEILPADGKD--APQFRVVF 462
>tr|Q8VZ93|Q8VZ93_ARATH Allyl alcohol dehydrogenase-like protein (Putative uncharacterized protein At3g59835) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At3g59835 PE=4 SV=1 Length = 97
Score = 73.6 bits (179), Expect = 5e-12 Identities = 35/51 (68%), Positives = 42/51 (82%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGS +A G+ R+T+AGYCPVS+DLEPCRWE+LPA D AP FR+VF Sbjct: 50 VFEFGSVAATGD-RVTLAGYCPVSDDLEPCRWEILPADGKD--APQFRVVF 97
>tr|A5BJC2|A5BJC2_VITVI Putative uncharacterized protein (Chromosome chr2 scaffold_11, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00015820001 PE=4 SV=1 Length = 97
Score = 71.2 bits (173), Expect = 3e-11 Identities = 34/51 (66%), Positives = 41/51 (80%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGS AA +++T+AGYCPVS+DLEPCRWE+LPA D AP FR+VF Sbjct: 50 VFEFGSV-AASSDKVTLAGYCPVSDDLEPCRWEILPASGSD--APQFRVVF 97
>tr|A9PBB4|A9PBB4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 98
Score = 70.1 bits (170), Expect = 6e-11 Identities = 32/51 (62%), Positives = 42/51 (82%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGS SA + ++T+AG+CPVS+DLEPCRWE++PA D+ AP FR+VF Sbjct: 51 VFEFGSVSATAD-KVTLAGFCPVSDDLEPCRWEIMPA--SDSDAPQFRVVF 98
>tr|A9NYN1|A9NYN1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 101
Score = 67.0 bits (162), Expect = 5e-10 Identities = 32/51 (62%), Positives = 39/51 (76%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFG A A E+ +T+AGYCPVSND+EPCRWE+LP P+ A FR+VF Sbjct: 54 VFEFGLA-AKSEDGITLAGYCPVSNDIEPCRWEILPTGDPE--AHQFRVVF 101
>tr|A3B5J7|A3B5J7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018319 PE=4 SV=1 Length = 99
Score = 66.2 bits (160), Expect = 8e-10 Identities = 33/51 (64%), Positives = 40/51 (78%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGSA+ +G +T+AGYCPVS+DLEPCRWE++PA AP FRIVF Sbjct: 52 VFEFGSAAESGAA-VTLAGYCPVSDDLEPCRWELVPA--AGEGAPQFRIVF 99
>tr|A2Y674|A2Y674_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20497 PE=4 SV=1 Length = 99
Score = 66.2 bits (160), Expect = 8e-10 Identities = 33/51 (64%), Positives = 40/51 (78%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGSA+ +G +T+AGYCPVS+DLEPCRWE++PA AP FRIVF Sbjct: 52 VFEFGSAAESGAA-VTLAGYCPVSDDLEPCRWELVPA--AGEGAPQFRIVF 99
>tr|B6T5A5|B6T5A5_MAIZE Allyl alcohol dehydrogenase-like protein OS=Zea mays PE=4 SV=1 Length = 101
Score = 64.7 bits (156), Expect = 2e-09 Identities = 32/51 (62%), Positives = 41/51 (80%) Frame = +2
Query: 155 VFEFGSASAAGEERLTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 VFEFGSA+ +G +T+AGYCPVS++LEPCRWE++PA + AP FRIVF Sbjct: 54 VFEFGSAAESGAA-VTLAGYCPVSDELEPCRWELVPAAV--DGAPQFRIVF 101
>tr|Q1EJK2|Q1EJK2_PICAB Putative allyl alcohol dehydrogenase-like protein (Fragment) OS=Picea abies GN=se1100 PE=4 SV=1 Length = 37
Score = 60.8 bits (146), Expect = 3e-08 Identities = 25/37 (67%), Positives = 31/37 (83%) Frame = +2
Query: 197 LTIAGYCPVSNDLEPCRWEVLPAPPPDNTAPLFRIVF 307 +T+AGYCPVSND+EPCRWE+LP P+ AP FR+VF Sbjct: 3 ITLAGYCPVSNDIEPCRWEILPTGDPE--APQFRVVF 37
>tr|A9SHA5|A9SHA5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_79414 PE=4 SV=1 Length = 267
Score = 46.6 bits (109), Expect = 7e-04 Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 5/102 (4%) Frame = -1
Query: 300 MRKRGAVLSGGGAGKTSQRQGSRSLDTGQYPAIVRRSSPAALAEPNSKTLVSGGDCCCCC 121 MR GA L G+ S QGS S +TGQYPA R +P++L +PNS TLVS Sbjct: 2 MRNLGASLPP--EGRISHLQGSISSETGQYPA---RVTPSSLLDPNSNTLVSDLKAALMS 56
Query: 120 WLEVTV-----ELGFAGAPSASPSLEAFFLRHPPNRPIFAVA 10 L + +LG G + AFFLR P P+ ++ Sbjct: 57 GLGGSAMAGDSKLGLLGWGAGGRVSSAFFLR--PKNPMVGIS 96
|