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NBDC - LSDB Archive
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DK947005
Clone id YMU02A01NGRL0014_H08
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_H08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AAGAGTGTGCTCTGCTACATTGCAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCA
ACAATGGCGGCTGCAGCGCTTTCTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCC
CAGAGCGAGCTGAGCTCTAAGGTAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAA
ACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGC
CCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGG
GACACCGCCGGCCTGTCTGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTG
ATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCC
AAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCT
GAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCC
ATC
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 139
Score (bit) 250.0
E-value 3.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947005|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_H08, 5'
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   250   3e-66
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   249   5e-66
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   249   6e-66
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   249   8e-66
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   248   2e-65
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   247   2e-65
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   247   2e-65
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   246   5e-65
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   246   5e-65
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   245   9e-65
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   245   9e-65
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   245   1e-64
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   245   1e-64
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   244   1e-64
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   244   2e-64
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   244   2e-64
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   244   3e-64
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   244   3e-64
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   243   3e-64
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   243   6e-64
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   243   6e-64
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   242   7e-64
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   242   7e-64
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   242   1e-63
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   242   1e-63
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   241   2e-63
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   241   2e-63
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   240   3e-63
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   240   3e-63
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   240   3e-63

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  250 bits (639), Expect = 3e-66
 Identities = 119/139 (85%), Positives = 128/139 (92%), Gaps = 4/139 (2%)
 Frame = +1

Query: 139 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 306
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 307 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 486
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 487 GLDYLGNPSLVHAQSILAI 543
           GLDYLGNPSL+HAQSILAI
Sbjct: 139 GLDYLGNPSLIHAQSILAI 157


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  249 bits (637), Expect = 5e-66
 Identities = 121/148 (81%), Positives = 129/148 (87%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 279
           GQ + KPQ+EL  KVG  G  RVSMR+T+  + +S WYGPDR KYLGPFS + PSYL GE
Sbjct: 13  GQTLLKPQNELVRKVGGNG-GRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 280 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 459
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFK 131

Query: 460 AGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AGSQIF EGGLDYLGNP+LVHAQSILAI
Sbjct: 132 AGSQIFQEGGLDYLGNPNLVHAQSILAI 159


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  249 bits (636), Expect = 6e-66
 Identities = 118/148 (79%), Positives = 129/148 (87%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 279
           GQAV K Q+E   KVGN GE R++MR+TV  +  S WYG DR KYLGPFS + PSYL GE
Sbjct: 13  GQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGE 72

Query: 280 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 459
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 132

Query: 460 AGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AGSQIF+EGGLDYLGNP+LVHAQSILAI
Sbjct: 133 AGSQIFSEGGLDYLGNPNLVHAQSILAI 160


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  249 bits (635), Expect = 8e-66
 Identities = 125/151 (82%), Positives = 138/151 (91%), Gaps = 3/151 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 270
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 271 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 450
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 451 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 163



 Score = 30.8 bits (68), Expect = 4.4
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 280 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 429
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  248 bits (632), Expect = 2e-65
 Identities = 119/132 (90%), Positives = 124/132 (93%), Gaps = 2/132 (1%)
 Frame = +1

Query: 154 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 327
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 328 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 507
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 508 PSLVHAQSILAI 543
           PSLVHAQSILAI
Sbjct: 149 PSLVHAQSILAI 160


>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic
           OS=Apium graveolens GN=LHC0 PE=1 SV=1
          Length = 264

 Score =  247 bits (631), Expect = 2e-65
 Identities = 119/131 (90%), Positives = 123/131 (93%), Gaps = 1/131 (0%)
 Frame = +1

Query: 154 GEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPE 330
           G  RVSMRKTV    SDSPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPE
Sbjct: 29  GNGRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 331 TFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNP 510
           TFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNP
Sbjct: 89  TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 148

Query: 511 SLVHAQSILAI 543
           SLVHAQSIL+I
Sbjct: 149 SLVHAQSILSI 159


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  247 bits (631), Expect = 2e-65
 Identities = 117/148 (79%), Positives = 127/148 (85%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 279
           GQ   K  +EL  K+G VG  RVSMR+TV  +  S WYGPDR KYLGPFS + PSYL GE
Sbjct: 13  GQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGE 72

Query: 280 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 459
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 132

Query: 460 AGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AGSQIF+EGGLDYLGNP+L+HAQSILAI
Sbjct: 133 AGSQIFSEGGLDYLGNPNLIHAQSILAI 160


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  246 bits (628), Expect = 5e-65
 Identities = 123/151 (81%), Positives = 131/151 (86%), Gaps = 3/151 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 270
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 271 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 450
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 451 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAI 160


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  246 bits (628), Expect = 5e-65
 Identities = 117/135 (86%), Positives = 123/135 (91%), Gaps = 4/135 (2%)
 Frame = +1

Query: 151 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 318
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 319 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 498
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 499 LGNPSLVHAQSILAI 543
           LGNPSLVHAQSILAI
Sbjct: 148 LGNPSLVHAQSILAI 162


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  245 bits (626), Expect = 9e-65
 Identities = 118/134 (88%), Positives = 124/134 (92%), Gaps = 4/134 (2%)
 Frame = +1

Query: 154 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 321
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 322 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 501
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 502 GNPSLVHAQSILAI 543
           GNPSLVHAQSILAI
Sbjct: 149 GNPSLVHAQSILAI 162
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 148
Score (bit) 265.0
E-value 2.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947005|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_H08, 5'
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   265   2e-69
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   256   4e-67
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   256   4e-67
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   256   4e-67
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   256   7e-67
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   255   1e-66
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   254   2e-66
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   253   6e-66
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   252   8e-66
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   251   1e-65
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   251   2e-65
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   251   2e-65
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   250   3e-65
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   249   5e-65
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   249   7e-65
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   249   7e-65
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   249   9e-65
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   249   9e-65
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   248   1e-64
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   248   1e-64
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   248   1e-64
tr|Q677F6|Q677F6_HYAOR Chloroplast chlorophyll A-B binding prote...   248   2e-64
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   248   2e-64
tr|Q40185|Q40185_LEMGI Light-harvesting chlorophyll a/b protein ...   247   3e-64
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   247   3e-64
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   247   3e-64
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   247   3e-64
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   246   4e-64
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   246   4e-64
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   246   4e-64

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  265 bits (676), Expect = 2e-69
 Identities = 129/148 (87%), Positives = 137/148 (92%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 279
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 280 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 459
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 460 AGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAI 160


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  256 bits (655), Expect = 4e-67
 Identities = 128/150 (85%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 273
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 274 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 453
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 454 FKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAI 163


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  256 bits (655), Expect = 4e-67
 Identities = 128/150 (85%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 273
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 274 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 453
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 454 FKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAI 163


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  256 bits (655), Expect = 4e-67
 Identities = 128/150 (85%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 273
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 274 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 453
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 454 FKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAI 162


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  256 bits (653), Expect = 7e-67
 Identities = 127/153 (83%), Positives = 136/153 (88%), Gaps = 5/153 (3%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 264
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 265 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 444
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 445 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAI
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAI 165


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  255 bits (651), Expect = 1e-66
 Identities = 127/150 (84%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 273
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 274 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 453
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 454 FKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAI 162


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  254 bits (650), Expect = 2e-66
 Identities = 126/150 (84%), Positives = 138/150 (92%), Gaps = 2/150 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 273
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 274 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 453
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 454 FKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAI 162


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  253 bits (645), Expect = 6e-66
 Identities = 122/148 (82%), Positives = 135/148 (91%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 279
           GQ++ KP +ELS KVG+  EARV+MR+TV  +SDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGS-SEARVTMRRTVKSTSDSIWYGADRPKYLGPFSGETPSYLTGE 72

Query: 280 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 459
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFK 132

Query: 460 AGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAI 160


>tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding
           protein OS=Prunus persica GN=Lhcb*Pp1 PE=4 SV=1
          Length = 267

 Score =  252 bits (644), Expect = 8e-66
 Identities = 127/153 (83%), Positives = 135/153 (88%), Gaps = 5/153 (3%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGN-VGEARVSMRKTVSKS----SDSPWYGPDRVKYLGPFSGEAPS 264
           GQAV     +L S V N VGE R++MRKT SKS    S SPWYGPDRVKYLGPFSGEAPS
Sbjct: 15  GQAV-----KLGSSVSNIVGEGRITMRKTASKSKNVSSGSPWYGPDRVKYLGPFSGEAPS 69

Query: 265 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 444
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 70  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 129

Query: 445 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           AVWFKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 130 AVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 162


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  251 bits (642), Expect = 1e-65
 Identities = 124/150 (82%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = +1

Query: 100 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 273
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 274 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 453
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 454 FKAGSQIFAEGGLDYLGNPSLVHAQSILAI 543
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAI 162