DK947022
Clone id YMU02A01NGRL0014_I07
Library
Length 299
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_I07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGTTGGCTCATCATTGCGTGATGCAGTTGCATGTGATTCCCAAATCTGGCTATGGACTG
CAAGGGCTTTAAATTCACCATTTCTAAGGTTGTAATTGTCGACTGTTTTCGAGGCCTGCG
TGTAAGGTGTTGCTCTCTTTCTTGAGCATGTCTTCTGTTGTGTTTTGATCCTTCCATGCA
CTGTCATGCGAAACTGATTCATGGTTGTTGTCTCGTCTATGTAGTAATTGAAGGCACATC
ATAGAAATATCATTGTGTTGAAGTCCAAAGAANAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P25792
Definition sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni
Align length 29
Score (bit) 28.9
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947022|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_I07, 5'
(266 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase OS=Sch... 29 8.5

>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase
OS=Schistosoma mansoni PE=2 SV=1
Length = 340

Score = 28.9 bits (63), Expect = 8.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2

Query: 157 QKTCSRKRATPYTQ-ASKTVDNYNLRNGE 74
++TC RK TPYTQ + +YN++N E
Sbjct: 217 KQTCQRKYKTPYTQDKHRGKSSYNVKNDE 245


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947022|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_I07, 5'
(266 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******