DK947034 |
Clone id |
YMU02A01NGRL0014_I22 |
Library |
YMU02 |
Length |
416 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_I22. 5' end sequence. |
Accession |
DK947034 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL419Contig1 |
Sequence |
AAGGTAATTATGGCAACAAATCGTGCAGACACATTAGATCCAGCCCTCCTCCGACCAGGA AGATTGGATAGAAAGATAGAGTTTCCCTTGCCAGATAGAAGGCAGAAACGGCTAGTGTTT CAGGTTTGTACCGCGAAAATGAACCTTGGTGATGAGGTGGATCTTGAAGACTATGTGTCT CGACCTGATAAAATCAGTGCTGCTGAGATTGCAGCCATTTGCCAAGAAGCTGGCTTGCAT GCGGTGAGGAAGAATCGGTATGTTATACTCCCAAAGGATTTTGAGAAAGGCTATCGGTCC AACGTAAAGAAATCAGACACAGACTTCGACTTTTATAAATAATTCTTCTGAAAATGAACA ACAGAATTTTTAGGAGATCTTTGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54778 |
Definition |
sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum tuberosum |
Align length |
102 |
Score (bit) |
202.0 |
E-value |
6.0e-52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NXZ6 |
Definition |
tr|A7NXZ6|A7NXZ6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
102 |
Score (bit) |
201.0 |
E-value |
2.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947034|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_I22, 5' (387 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NXZ6|A7NXZ6_VITVI Chromosome chr6 scaffold_3, whole genome ... 201 2e-50 tr|Q8W3N9|Q8W3N9_ORYSJ 26S proteasome regulatory particle triple... 200 3e-50 tr|Q6Z875|Q6Z875_ORYSJ Os02g0325100 protein OS=Oryza sativa subs... 200 3e-50 tr|Q6QP36|Q6QP36_MAIZE 26S proteasome regulatory complex ATPase ... 200 3e-50 tr|Q5PNS4|Q5PNS4_ARATH At5g58290 OS=Arabidopsis thaliana PE=2 SV=1 200 3e-50 tr|O65750|O65750_CICAR 26S protease regulatory subunit 6 (Fragme... 200 3e-50 tr|B6TRH7|B6TRH7_MAIZE 26S protease regulatory subunit 6B OS=Zea... 200 3e-50 tr|B6TDT1|B6TDT1_MAIZE 26S protease regulatory subunit 6B OS=Zea... 200 3e-50 tr|A9T0R6|A9T0R6_PHYPA Predicted protein OS=Physcomitrella paten... 199 4e-50 tr|A9SHI2|A9SHI2_PHYPA Predicted protein OS=Physcomitrella paten... 199 4e-50 tr|A9RYX6|A9RYX6_PHYPA Predicted protein OS=Physcomitrella paten... 199 4e-50 tr|A9PJR7|A9PJR7_POPJC Putative uncharacterized protein OS=Popul... 199 6e-50 tr|A9TJC3|A9TJC3_PHYPA Predicted protein OS=Physcomitrella paten... 199 8e-50 tr|A9PGI7|A9PGI7_POPTR Putative uncharacterized protein OS=Popul... 196 4e-49 tr|B8AGL8|B8AGL8_ORYSI Putative uncharacterized protein OS=Oryza... 187 3e-46 tr|B6KJ96|B6KJ96_TOXGO 26S protease regulatory subunit 6b, putat... 183 4e-45 tr|A3A683|A3A683_ORYSJ Putative uncharacterized protein OS=Oryza... 181 2e-44 tr|Q172T1|Q172T1_AEDAE 26S protease regulatory subunit 6b OS=Aed... 177 2e-43 tr|B6ACZ9|B6ACZ9_9CRYT 26S proteasome regulatory subunit 6b, put... 177 2e-43 tr|B0WDD3|B0WDD3_CULQU 26S protease regulatory subunit 6B OS=Cul... 177 2e-43 tr|Q1HQC6|Q1HQC6_BOMMO 26S protease regulatory subunit 6B OS=Bom... 177 2e-43 tr|B0EHZ5|B0EHZ5_ENTDI 26S protease regulatory subunit 6B, putat... 177 3e-43 tr|A4S2N3|A4S2N3_OSTLU Predicted protein OS=Ostreococcus lucimar... 176 5e-43 tr|Q7PGR3|Q7PGR3_ANOGA AGAP003008-PA (Fragment) OS=Anopheles gam... 176 5e-43 tr|Q011N6|Q011N6_OSTTA 26S proteasome AAA-ATPase subunit RPT3 (I... 176 7e-43 tr|Q5CR10|Q5CR10_CRYPV 26S proteasome regulatory subunit 26b lik... 175 9e-43 tr|Q5CLA4|Q5CLA4_CRYHO 26S proteasome AAA-ATPase subunit RPT3 OS... 175 9e-43 tr|A2G7J0|A2G7J0_TRIVA Proteasome endopeptidase complex, putativ... 175 9e-43 tr|Q9V405|Q9V405_DROME GH06151p OS=Drosophila melanogaster GN=Rp... 174 3e-42 tr|Q29IU3|Q29IU3_DROPS GA14216 OS=Drosophila pseudoobscura pseud... 174 3e-42
>tr|A7NXZ6|A7NXZ6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023924001 PE=3 SV=1 Length = 418
Score = 201 bits (511), Expect = 2e-50 Identities = 99/102 (97%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 365
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAAEIAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 366 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 407
>tr|Q8W3N9|Q8W3N9_ORYSJ 26S proteasome regulatory particle triple-A ATPase subunit3 (Fragment) OS=Oryza sativa subsp. japonica GN=OsRPT3 PE=2 SV=1 Length = 368
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 256 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 315
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAA+IAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 316 RPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 357
>tr|Q6Z875|Q6Z875_ORYSJ Os02g0325100 protein OS=Oryza sativa subsp. japonica GN=P0476C12.12 PE=2 SV=1 Length = 419
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 307 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 366
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAA+IAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 367 RPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 408
>tr|Q6QP36|Q6QP36_MAIZE 26S proteasome regulatory complex ATPase RPT3 OS=Zea mays PE=2 SV=1 Length = 348
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 236 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 295
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAA+IAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 296 RPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 337
>tr|Q5PNS4|Q5PNS4_ARATH At5g58290 OS=Arabidopsis thaliana PE=2 SV=1 Length = 408
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNL DEVDLEDYVS Sbjct: 296 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVS 355
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAAEIAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 356 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANV 397
>tr|O65750|O65750_CICAR 26S protease regulatory subunit 6 (Fragment) OS=Cicer arietinum PE=2 SV=1 Length = 177
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 65 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 124
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAAEI+AICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 125 RPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 166
>tr|B6TRH7|B6TRH7_MAIZE 26S protease regulatory subunit 6B OS=Zea mays PE=2 SV=1 Length = 420
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 308 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 367
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAA+IAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 368 RPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 409
>tr|B6TDT1|B6TDT1_MAIZE 26S protease regulatory subunit 6B OS=Zea mays PE=2 SV=1 Length = 420
Score = 200 bits (508), Expect = 3e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVS Sbjct: 308 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 367
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAA+IAAICQEAG+HAVRKNRYVILPKDFEKGYR+NV Sbjct: 368 RPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 409
>tr|A9T0R6|A9T0R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190505 PE=3 SV=1 Length = 412
Score = 199 bits (507), Expect = 4e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL +EVDLEDYVS Sbjct: 300 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSEEVDLEDYVS 359
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAAEI+AICQEAG+HAVRKNRYVILPKDFEKGYRSNV Sbjct: 360 RPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRSNV 401
>tr|A9SHI2|A9SHI2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164900 PE=3 SV=1 Length = 387
Score = 199 bits (507), Expect = 4e-50 Identities = 98/102 (96%), Positives = 101/102 (99%) Frame = +1
Query: 1 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 180 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL +EVDLEDYVS Sbjct: 275 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSEEVDLEDYVS 334
Query: 181 RPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRSNV 306 RPDKISAAEI+AICQEAG+HAVRKNRYVILPKDFEKGYRSNV Sbjct: 335 RPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRSNV 376
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