DK947040
Clone id YMU02A01NGRL0014_J08
Library
Length 328
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_J08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATTCTAGAGGCCGAGGCACCCCATTGTTTTTTTTTTATTAAAGCTTTCGTGTTTCAACT
ATATTAAATGGCTTATTTGAACCTCAAGAGCTAGTTCACACATTGGCTACAAGACACTAT
TGCAGCTATGTAATTGATCGGATTCATGTCCAACACTAAGTGCAATGAGATAAAGACTCA
TAATGTGTATTCCAACGATGTTTGGCATTGCCTCACAAGTACCCCACACCTCTTTATCCT
GATCATCATGATATGTAAATTTTGAATTGTCACTTGAGCAACAAACTTGTATCTGCTCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947040|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_J08, 5'
(258 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B7FEZ0
Definition tr|B7FEZ0|B7FEZ0_9MUSC Aldehyde reductase (Fragment) OS=Drosophila pseudoobscura
Align length 58
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947040|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_J08, 5'
(258 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FEZ0|B7FEZ0_9MUSC Aldehyde reductase (Fragment) OS=Drosophi... 33 5.4
tr|B5DSP9|B5DSP9_DROPS GA23131 OS=Drosophila pseudoobscura pseud... 33 5.4
tr|B4HAR4|B4HAR4_DROPE GL15622 OS=Drosophila persimilis GN=GL156... 33 5.4

>tr|B7FEZ0|B7FEZ0_9MUSC Aldehyde reductase (Fragment) OS=Drosophila
pseudoobscura GN=ARY PE=4 SV=1
Length = 361

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1

Query: 216 TYHDDQDKEVWGTCEAMPNIVGIHIMSLYLIALSVGHESDQLHSCNSVL*PMCELALE 43
T+HD +D V CE ++G + LYL+ VG++ H C+ +L PM + L+
Sbjct: 99 THHDPRD--VRRICEQQLKLLGFTYIDLYLLHFPVGYK----HMCDEILKPMSDGKLQ 150


>tr|B5DSP9|B5DSP9_DROPS GA23131 OS=Drosophila pseudoobscura
pseudoobscura GN=GA23131 PE=4 SV=1
Length = 379

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1

Query: 216 TYHDDQDKEVWGTCEAMPNIVGIHIMSLYLIALSVGHESDQLHSCNSVL*PMCELALE 43
T+HD +D V CE ++G + LYL+ VG++ H C+ +L PM + L+
Sbjct: 117 THHDPRD--VRRICEQQLKLLGFTYIDLYLLHFPVGYK----HMCDEILKPMSDGKLQ 168


>tr|B4HAR4|B4HAR4_DROPE GL15622 OS=Drosophila persimilis GN=GL15622
PE=4 SV=1
Length = 379

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1

Query: 216 TYHDDQDKEVWGTCEAMPNIVGIHIMSLYLIALSVGHESDQLHSCNSVL*PMCELALE 43
T+HD +D V CE ++G + LYL+ VG++ H C+ +L PM + L+
Sbjct: 117 THHDPRD--VRRICEQQLKLLGFTYIDLYLLHFPVGYK----HMCDEILKPMSDGKLQ 168