DK947057
Clone id YMU02A01NGRL0014_K05
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_K05. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ATGGAGTCTTGCCGGCATACTTTCATGACGTTGGAACTTTGGAATTTCAAGATAATTTGG
GCAGACTATGGATGGACTTGGGTACCGCTGATGCATTGGCGTTGGATGTATTCATAAACT
CGTTTTCCGTTGTGAGCTCAGAACATGTAGGAATCAAGGAGCTCACCTTTGGTGGAAAAC
GCTTAGGTGATTGGGATGAAGGCATGACTTCGGAAGAAGATGGCTATATTTCTTACAAGA
TTTAGTTTCCTCGTAGGTATTTCCGTCATTAAGTTGTAAGATCAGGCTTGTTTGAGGTGT
GTTAAGTTAGTAAAGCAACAGTGAGCAGGTTAAGAGTGGCACGATCTTGAAGATGTATTA
CCACATTATTTGAAGTTGGTATAGTCTCCTTTTTGAGCTCACTATCGATCATTTGGACAA
TTAATCATTGATAGACTAGAACGTTGGACAAATAAGGTGTGCTGCATTTATTCTTGCAAT
GAGGATTGGCTTTAGACATGAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9SVA3
Definition sp|Q9SVA3|FBK98_ARATH F-box/Kelch-repeat protein At4g39550 OS=Arabidopsis thaliana
Align length 67
Score (bit) 29.6
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947057|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_K05, 5'
(500 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SVA3|FBK98_ARATH F-box/Kelch-repeat protein At4g39550 OS=Ar... 30 8.2

>sp|Q9SVA3|FBK98_ARATH F-box/Kelch-repeat protein At4g39550
OS=Arabidopsis thaliana GN=At4g39550 PE=2 SV=1
Length = 392

Score = 29.6 bits (65), Expect = 8.2
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3

Query: 18 YFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRLGDWD 197
Y++ G ++ D + RLW DL L G K +GGK WD
Sbjct: 288 YYYYKGVFKWYDTMARLWRDLKGVKGLP-----------RFARCGGKMADYGGKMAVFWD 336

Query: 198 EGMTSEE 218
+ +TS++
Sbjct: 337 KIVTSDD 343


tr_hit_id Q6K7Q4
Definition tr|Q6K7Q4|Q6K7Q4_ORYSJ Putative uncharacterized protein P0452F04.30 OS=Oryza sativa subsp. japonica
Align length 80
Score (bit) 108.0
E-value 1.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947057|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_K05, 5'
(500 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6K7Q4|Q6K7Q4_ORYSJ Putative uncharacterized protein P0452F04... 108 1e-22
tr|Q0DW79|Q0DW79_ORYSJ Os02g0827600 protein OS=Oryza sativa subs... 108 1e-22
tr|B8AF65|B8AF65_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22
tr|A3ACX7|A3ACX7_ORYSJ Putative uncharacterized protein OS=Oryza... 108 1e-22
tr|Q9FT95|Q9FT95_ARATH Putative uncharacterized protein F8L15_13... 107 2e-22
tr|Q8VZD1|Q8VZD1_ARATH Putative uncharacterized protein (At5g084... 107 2e-22
tr|B4FUY6|B4FUY6_MAIZE Putative uncharacterized protein OS=Zea m... 107 3e-22
tr|A9RLA1|A9RLA1_PHYPA Predicted protein OS=Physcomitrella paten... 107 3e-22
tr|A7QNQ5|A7QNQ5_VITVI Chromosome undetermined scaffold_133, who... 107 4e-22
tr|A9S7A0|A9S7A0_PHYPA Predicted protein OS=Physcomitrella paten... 105 2e-21
tr|B7FL25|B7FL25_MEDTR Putative uncharacterized protein OS=Medic... 103 6e-21
tr|Q9M0E3|Q9M0E3_ARATH Putative uncharacterized protein AT4g2940... 91 4e-17
tr|Q5XV66|Q5XV66_ARATH Putative uncharacterized protein OS=Arabi... 91 4e-17
tr|A9NZ41|A9NZ41_PICSI Putative uncharacterized protein OS=Picea... 91 4e-17
tr|A7PEC4|A7PEC4_VITVI Chromosome chr11 scaffold_13, whole genom... 87 3e-16
tr|B4FZE4|B4FZE4_MAIZE Putative uncharacterized protein OS=Zea m... 85 2e-15
tr|Q5JKR3|Q5JKR3_ORYSJ cDNA clone:J013135L15, full insert sequen... 84 3e-15
tr|B8AAC5|B8AAC5_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15
tr|Q2JJW5|Q2JJW5_SYNJB Putative uncharacterized protein OS=Synec... 69 9e-11
tr|A8G436|A8G436_PROM2 Putative uncharacterized protein OS=Proch... 66 1e-09
tr|Q31BL7|Q31BL7_PROM9 Putative uncharacterized protein OS=Proch... 65 2e-09
tr|A2BQE7|A2BQE7_PROMS Putative uncharacterized protein OS=Proch... 65 2e-09
tr|A3PC68|A3PC68_PROM0 Putative uncharacterized protein OS=Proch... 64 4e-09
tr|Q7VBR7|Q7VBR7_PROMA Uncharacterized protein OS=Prochlorococcu... 63 7e-09
tr|Q3AK44|Q3AK44_SYNSC Putative uncharacterized protein OS=Synec... 62 1e-08
tr|Q2JRY8|Q2JRY8_SYNJA Putative uncharacterized protein OS=Synec... 62 1e-08
tr|B2J5Q9|B2J5Q9_NOSP7 Putative uncharacterized protein OS=Nosto... 62 1e-08
tr|A8HYI2|A8HYI2_CHLRE Predicted protein OS=Chlamydomonas reinha... 62 1e-08
tr|Q7V224|Q7V224_PROMP Putative uncharacterized protein OS=Proch... 62 2e-08
tr|Q05SN6|Q05SN6_9SYNE Putative uncharacterized protein OS=Synec... 62 2e-08

>tr|Q6K7Q4|Q6K7Q4_ORYSJ Putative uncharacterized protein P0452F04.30
OS=Oryza sativa subsp. japonica GN=P0452F04.30 PE=4 SV=1
Length = 178

Score = 108 bits (270), Expect = 1e-22
Identities = 45/80 (56%), Positives = 64/80 (80%)
Frame = +3

Query: 3 GVLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKR 182
GV+P+ FHD+ +EFQDN GR+W+DLGT+D L LDV +N + +SSEH+GIK++ FGGK+
Sbjct: 99 GVMPSSFHDISDVEFQDNWGRVWVDLGTSDYLGLDVLLNCLTQLSSEHLGIKQVVFGGKK 158

Query: 183 LGDWDEGMTSEEDGYISYKI 242
+GDW+EGM + + GY +KI
Sbjct: 159 MGDWEEGMKNSDYGYRHFKI 178


>tr|Q0DW79|Q0DW79_ORYSJ Os02g0827600 protein OS=Oryza sativa subsp.
japonica GN=Os02g0827600 PE=2 SV=1
Length = 276

Score = 108 bits (270), Expect = 1e-22
Identities = 45/80 (56%), Positives = 64/80 (80%)
Frame = +3

Query: 3 GVLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKR 182
GV+P+ FHD+ +EFQDN GR+W+DLGT+D L LDV +N + +SSEH+GIK++ FGGK+
Sbjct: 197 GVMPSSFHDISDVEFQDNWGRVWVDLGTSDYLGLDVLLNCLTQLSSEHLGIKQVVFGGKK 256

Query: 183 LGDWDEGMTSEEDGYISYKI 242
+GDW+EGM + + GY +KI
Sbjct: 257 MGDWEEGMKNSDYGYRHFKI 276


>tr|B8AF65|B8AF65_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_09536 PE=4 SV=1
Length = 276

Score = 108 bits (270), Expect = 1e-22
Identities = 45/80 (56%), Positives = 64/80 (80%)
Frame = +3

Query: 3 GVLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKR 182
GV+P+ FHD+ +EFQDN GR+W+DLGT+D L LDV +N + +SSEH+GIK++ FGGK+
Sbjct: 197 GVMPSSFHDISDVEFQDNWGRVWVDLGTSDYLGLDVLLNCLTQLSSEHLGIKQVVFGGKK 256

Query: 183 LGDWDEGMTSEEDGYISYKI 242
+GDW+EGM + + GY +KI
Sbjct: 257 MGDWEEGMKNSDYGYRHFKI 276


>tr|A3ACX7|A3ACX7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_008649 PE=4 SV=1
Length = 220

Score = 108 bits (270), Expect = 1e-22
Identities = 45/80 (56%), Positives = 64/80 (80%)
Frame = +3

Query: 3 GVLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKR 182
GV+P+ FHD+ +EFQDN GR+W+DLGT+D L LDV +N + +SSEH+GIK++ FGGK+
Sbjct: 141 GVMPSSFHDISDVEFQDNWGRVWVDLGTSDYLGLDVLLNCLTQLSSEHLGIKQVVFGGKK 200

Query: 183 LGDWDEGMTSEEDGYISYKI 242
+GDW+EGM + + GY +KI
Sbjct: 201 MGDWEEGMKNSDYGYRHFKI 220


>tr|Q9FT95|Q9FT95_ARATH Putative uncharacterized protein F8L15_130
OS=Arabidopsis thaliana GN=F8L15_130 PE=4 SV=1
Length = 287

Score = 107 bits (268), Expect = 2e-22
Identities = 45/79 (56%), Positives = 65/79 (82%)
Frame = +3

Query: 6 VLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRL 185
V+P+ FHD+ +EFQDN GR+W+DLGT+D ALDV +N +V+SSE++GI+++ FGGKR+
Sbjct: 209 VMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRM 268

Query: 186 GDWDEGMTSEEDGYISYKI 242
GDW+EGMT+ + GY +KI
Sbjct: 269 GDWEEGMTNPDFGYKYFKI 287


>tr|Q8VZD1|Q8VZD1_ARATH Putative uncharacterized protein
(At5g08400/F8L15_130) OS=Arabidopsis thaliana
GN=At5g08400 PE=2 SV=1
Length = 333

Score = 107 bits (268), Expect = 2e-22
Identities = 45/79 (56%), Positives = 65/79 (82%)
Frame = +3

Query: 6 VLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRL 185
V+P+ FHD+ +EFQDN GR+W+DLGT+D ALDV +N +V+SSE++GI+++ FGGKR+
Sbjct: 255 VMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRM 314

Query: 186 GDWDEGMTSEEDGYISYKI 242
GDW+EGMT+ + GY +KI
Sbjct: 315 GDWEEGMTNPDFGYKYFKI 333


>tr|B4FUY6|B4FUY6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 238

Score = 107 bits (267), Expect = 3e-22
Identities = 45/79 (56%), Positives = 63/79 (79%)
Frame = +3

Query: 6 VLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRL 185
V+P+ FHD+ +EFQDN R+W+DLGT+D L LDV +N + +SSEH+GIK++ FGGK++
Sbjct: 160 VMPSSFHDISDVEFQDNWARVWVDLGTSDYLGLDVLLNCLTQLSSEHLGIKQVVFGGKKM 219

Query: 186 GDWDEGMTSEEDGYISYKI 242
GDW+EGMTS + GY +KI
Sbjct: 220 GDWEEGMTSSDYGYKHFKI 238


>tr|A9RLA1|A9RLA1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_116227 PE=4 SV=1
Length = 304

Score = 107 bits (267), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +3

Query: 18 YFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRLGDWD 197
+FH++G +EFQDN RLW+DLGT+D ++LD+ IN+ + +SS+HVGIK+L FGGK LGDWD
Sbjct: 230 FFHNIGDVEFQDNWARLWVDLGTSDPVSLDMLINTLANLSSDHVGIKQLVFGGKNLGDWD 289

Query: 198 EGMTSEEDGYISYKI 242
E + +EE GY SYKI
Sbjct: 290 EDLITEEAGYRSYKI 304


>tr|A7QNQ5|A7QNQ5_VITVI Chromosome undetermined scaffold_133, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00002621001 PE=4 SV=1
Length = 295

Score = 107 bits (266), Expect = 4e-22
Identities = 44/79 (55%), Positives = 65/79 (82%)
Frame = +3

Query: 6 VLPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRL 185
++P+ FHD+G +EFQDN GR+W+DLGT+D A+DV +N +V+SSE++GI+++ FGG+ +
Sbjct: 217 LMPSSFHDIGDVEFQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNM 276

Query: 186 GDWDEGMTSEEDGYISYKI 242
GDW+EGMTS E GY +KI
Sbjct: 277 GDWEEGMTSPEYGYKYFKI 295


>tr|A9S7A0|A9S7A0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_125056 PE=4 SV=1
Length = 176

Score = 105 bits (261), Expect = 2e-21
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = +3

Query: 9 LPAYFHDVGTLEFQDNLGRLWMDLGTADALALDVFINSFSVVSSEHVGIKELTFGGKRLG 188
L A+FHD+ +EFQ++ R+W+DLGT+D LDV IN+ + VSS+ VGIK+L FGGK LG
Sbjct: 99 LSAFFHDISDVEFQESWARVWIDLGTSDPCCLDVLINALTTVSSDFVGIKQLVFGGKHLG 158

Query: 189 DWDEGMTSEEDGYISYKI 242
DWDE + S EDGY +YKI
Sbjct: 159 DWDEDLKSNEDGYRAYKI 176