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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947068
Clone id YMU02A01NGRL0014_K24
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_K24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCATTAACTTTCTCGGAGTTGCAGCATTCATTGGGCTGTCCTTGATCACCGTAGCGGTTG
TATACCTCTTCGTAACAGACTTCTTGGAAAAGAGGAAAAGGGATGAAGAGATGAAAAAGC
TAAATGAAGAGGAGGCTGCTGCTAGAAAGAAGGGAGGTCCTCTCTCTGCGGCTAGCAAGG
GAGGAGCGAAGGGCTTTGGGAGGAAGCGTCTGGACGGTGATGATGAGTGATGGCAGGAGC
AAAGAAAAGGCAGCCCTGTTGTTAAACGATGACAATCACCGGACTACATAGCTAGGGTCT
TTTGATGTACTGCTTAACGTGAAAAATCCTTTGTGTGCTGACATTTTGTGGCCATGAGAA
TTGAGGGGCTGAAAGTACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q96E66
Definition sp|Q96E66|LRC51_HUMAN Leucine-rich repeat-containing protein 51 OS=Homo sapiens
Align length 41
Score (bit) 29.6
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947068|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_K24, 5'
         (383 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96E66|LRC51_HUMAN Leucine-rich repeat-containing protein 51 ...    30   4.8  
sp|P38735|YHD5_YEAST Uncharacterized ABC transporter ATP-binding...    29   6.3  
sp|Q4PI89|SPT6_USTMA Transcription elongation factor SPT6 OS=Ust...    29   6.3  
sp|A6NKK0|OR5H1_HUMAN Olfactory receptor 5H1 OS=Homo sapiens GN=...    29   6.3  
sp|Q7XA86|ZDH11_ARATH Probable S-acyltransferase At3g51390 OS=Ar...    29   8.2  

>sp|Q96E66|LRC51_HUMAN Leucine-rich repeat-containing protein 51
           OS=Homo sapiens GN=LRRC51 PE=2 SV=1
          Length = 192

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 141 QQPPLHLAFSSLHPFSSFPRSLLRRGIQPLR*SRTAQ*MLQ 19
           Q+PPL  +F S+H          R G++PL+ S++ + + Q
Sbjct: 12  QEPPLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKSGKSLTQ 52


>sp|P38735|YHD5_YEAST Uncharacterized ABC transporter ATP-binding
           protein/permease YHL035C OS=Saccharomyces cerevisiae
           GN=YHL035C PE=2 SV=1
          Length = 1592

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
 Frame = +3

Query: 6   NFLGVAAFIGLSLITVAVVYLF-VTDFLEKRKR------DEEMKKLNE 128
           NFLGV+AF G+S+I V     F + + L K ++      D+ + KLNE
Sbjct: 485 NFLGVSAFAGISIILVMFPLNFLLANLLGKFQKQTLKCTDQRISKLNE 532


>sp|Q4PI89|SPT6_USTMA Transcription elongation factor SPT6
           OS=Ustilago maydis GN=SPT6 PE=3 SV=1
          Length = 1723

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 78  DFLEKRKRDEEMKKLNEEEAAAR 146
           DF+E+ + DEEM+ L+EEE  AR
Sbjct: 203 DFIEEDEDDEEMQGLDEEEREAR 225


>sp|A6NKK0|OR5H1_HUMAN Olfactory receptor 5H1 OS=Homo sapiens
           GN=OR5H1 PE=2 SV=1
          Length = 313

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 3   INFLGVAAFIG----LSLITVAVVYLFVTDFLEKRKRDEEMKK 119
           INFL V  F G     S++T+ V Y FV   + K+K D+ ++K
Sbjct: 194 INFLMVFIFSGSIQVFSIVTILVSYTFVLFAILKKKSDKGVRK 236


>sp|Q7XA86|ZDH11_ARATH Probable S-acyltransferase At3g51390
           OS=Arabidopsis thaliana GN=At3g51390 PE=2 SV=1
          Length = 340

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 24  AFIGLSLITVAVVYLFVTDFLEKRKRD 104
           A + L L+ +  ++LF  +F+EK KRD
Sbjct: 39  ALVALHLVFIGFLFLFDAEFIEKTKRD 65
tr_hit_id Q10NE9
Definition tr|Q10NE9|Q10NE9_ORYSJ Os03g0271500 protein OS=Oryza sativa subsp. japonica
Align length 52
Score (bit) 46.6
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947068|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_K24, 5'
         (383 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q10NE9|Q10NE9_ORYSJ Os03g0271500 protein OS=Oryza sativa subs...    47   6e-04
tr|B8AKQ3|B8AKQ3_ORYSI Putative uncharacterized protein OS=Oryza...    47   6e-04
tr|Q2HS36|Q2HS36_MEDTR 80C09_19, related OS=Medicago truncatula ...    46   0.001
tr|A9SNY3|A9SNY3_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.003
tr|B6TA59|B6TA59_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.007
tr|B2BXT3|B2BXT3_9BRAS Putative uncharacterized protein OS=Boech...    40   0.077
tr|A7NYW4|A7NYW4_VITVI Chromosome chr6 scaffold_3, whole genome ...    40   0.077
tr|Q9ZW05|Q9ZW05_ARATH Putative uncharacterized protein At2g2918...    39   0.17 
tr|B2BXM8|B2BXM8_ARALY Putative uncharacterized protein OS=Arabi...    39   0.17 
tr|B2BXX6|B2BXX6_9BRAS Putative uncharacterized protein OS=Capse...    37   0.38 
tr|Q6LZT9|Q6LZT9_METMP Putative uncharacterized protein OS=Metha...    35   1.4  
tr|A2C9Y4|A2C9Y4_PROM3 Putative uncharacterized protein OS=Proch...    33   7.2  
tr|Q84Q82|Q84Q82_ORYSJ Putative uncharacterized protein OJ1261C0...    33   7.2  

>tr|Q10NE9|Q10NE9_ORYSJ Os03g0271500 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0271500 PE=2 SV=1
          Length = 150

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRD----EEMKKLNEEEAAAR 146
           ++ L   AF+GLS++T+ V+YL VTDFL+KR+R+    EE ++  EE    R
Sbjct: 89  VSVLLTVAFVGLSILTIGVIYLSVTDFLQKREREKFEREEAERQKEEARKKR 140


>tr|B8AKQ3|B8AKQ3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10928 PE=4 SV=1
          Length = 150

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRD----EEMKKLNEEEAAAR 146
           ++ L   AF+GLS++T+ V+YL VTDFL+KR+R+    EE ++  EE    R
Sbjct: 89  VSVLLTVAFVGLSILTIGVIYLSVTDFLQKREREKFEREEAERQKEEARKKR 140


>tr|Q2HS36|Q2HS36_MEDTR 80C09_19, related OS=Medicago truncatula
           GN=MtrDRAFT_AC157503g13v2 PE=4 SV=1
          Length = 183

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNEEEAAA 143
           ++ L   AFIGLS+IT+ V+YL VTDFL KR    E +K  +EEAA+
Sbjct: 113 VSALFFIAFIGLSVITIGVIYLAVTDFLTKR----EKEKFEKEEAAS 155


>tr|A9SNY3|A9SNY3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_233750 PE=4 SV=1
          Length = 192

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNE 128
           ++ L V A IGL+++T  V+YL VT+FLEKR   EE KK+ E
Sbjct: 112 VSTLFVLATIGLTVLTGGVIYLGVTEFLEKRALQEEQKKIEE 153


>tr|B6TA59|B6TA59_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 279

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRD----EEMKKLNEEEAAAR 146
           ++ L   AF+GLS++T+ V+YL V DFL+KR+++    EE +K  EE    R
Sbjct: 218 VSVLLTLAFVGLSILTLGVIYLSVQDFLQKREKEKFEKEEAEKQKEEARKKR 269


>tr|B2BXT3|B2BXT3_9BRAS Putative uncharacterized protein OS=Boechera
           divaricarpa PE=4 SV=1
          Length = 167

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 21/48 (43%), Positives = 32/48 (66%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNEEEAAAR 146
           I  L   AF+ L+++T+ VVY+ VT+FL KR+R+    K  ++EAA R
Sbjct: 91  IQVLLFVAFLALTVLTIGVVYIGVTEFLGKRERE----KFEKDEAAKR 134


>tr|A7NYW4|A7NYW4_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024279001
           PE=4 SV=1
          Length = 175

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 19/48 (39%), Positives = 33/48 (68%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNEEEAAAR 146
           I+ L   AF+ L+++T+ V+Y+ V+DFL+KR    E +K  +EE+A +
Sbjct: 104 ISALLFVAFVALTILTIGVIYIAVSDFLQKR----EKEKFEKEESAKK 147


>tr|Q9ZW05|Q9ZW05_ARATH Putative uncharacterized protein At2g29180
           OS=Arabidopsis thaliana GN=At2g29180 PE=2 SV=1
          Length = 169

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNEEEAAAR 146
           I  L   AF+ L+++T+ VVY+ VT+FL KR+R+    K  ++EAA +
Sbjct: 93  IQVLLFVAFLALTVLTIGVVYIGVTEFLGKRERE----KFEKDEAAKK 136


>tr|B2BXM8|B2BXM8_ARALY Putative uncharacterized protein
           OS=Arabidopsis lyrata subsp. lyrata PE=4 SV=1
          Length = 167

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNEEEAAAR 146
           I  L   AF+ L+++T+ VVY+ VT+FL KR+R+    K  ++EAA +
Sbjct: 91  IQVLLFVAFLALTVLTIGVVYIGVTEFLGKRERE----KFEKDEAAKK 134


>tr|B2BXX6|B2BXX6_9BRAS Putative uncharacterized protein OS=Capsella
           rubella PE=4 SV=1
          Length = 170

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +3

Query: 3   INFLGVAAFIGLSLITVAVVYLFVTDFLEKRKRDEEMKKLNEEEAAAR 146
           I  L   AF+ L+++T+ VVY+ VT+FL K+    E +K  +EEAA R
Sbjct: 93  IQVLLFVAFLVLTVLTIGVVYIGVTEFLGKK----ESEKFEKEEAAKR 136