DK947075 |
Clone id |
YMU02A01NGRL0014_L08 |
Library |
YMU02 |
Length |
592 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_L08. 5' end sequence. |
Accession |
DK947075 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL947Contig1 |
Sequence |
CGTTTTCTCACACTCTGTGCAGCGTCGCCCTCATACTACTGCTCTTGAGTAAACGGGGTA AAAGCTGCTGCAGCAGAAGAAGAAGAAGAAGAAGAAGGCGATATAGCAAGCAGGAAGCAG GGAGCCCGCGAGGGCTTGTGGAGCATGGGTGTGCGTCTTCTCACCACTCTGCTCTGCATC ACCTCGCTCATTCTCCTCCTCAAAGCCAAGCAGACCGTGCGGCGCGCTCTTGGCCTCGGT TACATCGCTCAAACCGTCAAGTATTCGGATACCTCTGGCTTTATCTACTTGGTGTACATC AACATCCTTGTTGCAGCCTACGGCCTTATCGTGTTCGTGAGTCTGATTCCTTCGGCATTA GGCAAGAGCTGCTCAGGAAAGTGCTCAAGATGGACCATTTTCGTGCTCGATCAGGTCTTC GCATATGTTCTATTGTCAGCAGTATCAGCTGCTACTGAAGTGCTGTACCTCGCGGACAAG GGCATGTCGAAGACTCAATGGGAGGCATTGTGCCCTACATATGGCTTTTTCTGCCACATG GTATCAGCCTCAGTTGCAATTGGCTCTGTTGCTGTGGGTCTCCTTGCAGTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VZQ3 |
Definition |
sp|Q8VZQ3|U4973_ARATH UPF0497 membrane protein At1g17200 OS=Arabidopsis thaliana |
Align length |
95 |
Score (bit) |
72.8 |
E-value |
1.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8W4Z5 |
Definition |
tr|Q8W4Z5|Q8W4Z5_GOSHI Putative uncharacterized protein f16 OS=Gossypium hirsutum |
Align length |
96 |
Score (bit) |
81.6 |
E-value |
3.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947075|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_L08, 5' (592 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8W4Z5|Q8W4Z5_GOSHI Putative uncharacterized protein f16 OS=G... 82 3e-14 tr|Q93XN3|Q93XN3_GOSHI Salicylic acid-induced 1 protein (Fragmen... 80 9e-14 tr|B6SR79|B6SR79_MAIZE Salicylic acid-induced 1 protein OS=Zea m... 80 9e-14 tr|B4FRG5|B4FRG5_MAIZE Putative uncharacterized protein OS=Zea m... 80 9e-14 tr|B4FBQ7|B4FBQ7_MAIZE Putative uncharacterized protein OS=Zea m... 79 1e-13 tr|Q7XLK9|Q7XLK9_ORYSJ OSJNBa0094P09.18 protein (OSJNBa0071G03.1... 78 4e-13 tr|Q0JEF7|Q0JEF7_ORYSJ Os04g0281900 protein OS=Oryza sativa subs... 78 4e-13 tr|Q01MG8|Q01MG8_ORYSA OSIGBa0131F24.1 protein OS=Oryza sativa G... 78 4e-13 tr|B8ARW3|B8ARW3_ORYSI Putative uncharacterized protein OS=Oryza... 78 4e-13 tr|A2X2I0|A2X2I0_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|Q6YW53|Q6YW53_ORYSJ Os02g0219900 protein OS=Oryza sativa subs... 75 4e-12 tr|B8LQF9|B8LQF9_PICSI Putative uncharacterized protein OS=Picea... 74 5e-12 tr|A9P1V1|A9P1V1_PICSI Putative uncharacterized protein OS=Picea... 69 2e-10 tr|A9NMM6|A9NMM6_PICSI Putative uncharacterized protein OS=Picea... 68 3e-10 tr|A7QBZ2|A7QBZ2_VITVI Chromosome chr1 scaffold_75, whole genome... 68 3e-10 tr|B6TUW9|B6TUW9_MAIZE Salicylic acid-induced 1 protein OS=Zea m... 68 4e-10 tr|A7R385|A7R385_VITVI Chromosome undetermined scaffold_490, who... 64 6e-09 tr|A3ARW9|A3ARW9_ORYSJ Putative uncharacterized protein OS=Oryza... 63 1e-08 tr|A7P0P3|A7P0P3_VITVI Chromosome chr19 scaffold_4, whole genome... 61 5e-08 tr|A5BEV1|A5BEV1_VITVI Putative uncharacterized protein OS=Vitis... 60 9e-08 tr|A9P0A6|A9P0A6_PICSI Putative uncharacterized protein OS=Picea... 59 2e-07 tr|A7PTY8|A7PTY8_VITVI Chromosome chr7 scaffold_31, whole genome... 57 8e-07 tr|A5ASN8|A5ASN8_VITVI Putative uncharacterized protein OS=Vitis... 57 1e-06 tr|B4G1G2|B4G1G2_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06 tr|B6TGJ8|B6TGJ8_MAIZE Membrane protein OS=Zea mays PE=2 SV=1 55 3e-06 tr|Q6YT98|Q6YT98_ORYSJ Os07g0442900 protein OS=Oryza sativa subs... 55 4e-06 tr|A2YKT5|A2YKT5_ORYSI Putative uncharacterized protein OS=Oryza... 55 4e-06 tr|B6TUH4|B6TUH4_MAIZE Plant integral membrane protein TIGR01569... 54 7e-06 tr|Q2QPX4|Q2QPX4_ORYSJ Plant integral membrane protein TIGR01569... 52 3e-05 tr|Q60D27|Q60D27_SOLDE Plant integral membrane protein TIGR01569... 51 6e-05
>tr|Q8W4Z5|Q8W4Z5_GOSHI Putative uncharacterized protein f16 OS=Gossypium hirsutum GN=f16 PE=2 SV=1 Length = 207
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 +V YSD F YLV+ N + A Y L+ ++ +PS S WT F+LDQ+ YV Sbjct: 68 SVSYSDLGAFRYLVHANGICAGYSLLSAIIAAVPSP-----STMPRAWTFFLLDQILTYV 122
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFCH 537 +L A + +TEVLYLA+KG S W A C T+ FCH Sbjct: 123 ILGAAAVSTEVLYLANKGDSAITWSAACGTFAGFCH 158
>tr|Q93XN3|Q93XN3_GOSHI Salicylic acid-induced 1 protein (Fragment) OS=Gossypium hirsutum PE=2 SV=1 Length = 169
Score = 80.1 bits (196), Expect = 9e-14 Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 +V YSD F YL + N + A Y L+ ++ +PS S WT F+LDQ+ YV Sbjct: 3 SVSYSDLGAFRYLAHANGICAGYSLLSAIIAAVPSP-----STMPRAWTFFLLDQILTYV 57
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFCH 537 +L A + +TEVLYLA+KG S W A C T+ FCH Sbjct: 58 ILGAAAVSTEVLYLANKGDSAITWSAACGTFAGFCH 93
>tr|B6SR79|B6SR79_MAIZE Salicylic acid-induced 1 protein OS=Zea mays PE=2 SV=1 Length = 209
Score = 80.1 bits (196), Expect = 9e-14 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 1/95 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 TV YSD GF YLVY N L AAY L F + +P S S W +F+LDQVF Y+ Sbjct: 68 TVAYSDLGGFKYLVYANGLCAAYSLASAFYTAVPRPATVSRS-----WVVFLLDQVFTYL 122
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 +L+A +AA E+LYLA G + W C +G FC Sbjct: 123 ILAAGAAAAELLYLAYNGDKEVTWSEACGVFGSFC 157
>tr|B4FRG5|B4FRG5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 209
Score = 80.1 bits (196), Expect = 9e-14 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 1/95 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 TV YSD GF YLVY N L AAY L F + +P S S W +F+LDQVF Y+ Sbjct: 68 TVAYSDLGGFKYLVYANGLCAAYSLASAFYTAVPRPATVSRS-----WVVFLLDQVFTYL 122
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 +L+A +AA E+LYLA G + W C +G FC Sbjct: 123 ILAAGAAAAELLYLAYNGDKEVTWSEACGVFGSFC 157
>tr|B4FBQ7|B4FBQ7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 213
Score = 79.3 bits (194), Expect = 1e-13 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Frame = +1
Query: 256 VKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYVL 432 V YSD GF YLVY N L AAY L+ F + +P S S W +F+LDQVF Y++ Sbjct: 73 VAYSDLGGFKYLVYANGLCAAYSLVSAFYTAVPRPATVSRS-----WLVFLLDQVFTYLI 127
Query: 433 LSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 L+A +AA E+LYLA G + W C +G FC Sbjct: 128 LAAGAAAAELLYLAYNGDKEVTWSEACGVFGSFC 161
>tr|Q7XLK9|Q7XLK9_ORYSJ OSJNBa0094P09.18 protein (OSJNBa0071G03.1 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0094P09.18 PE=4 SV=2 Length = 206
Score = 77.8 bits (190), Expect = 4e-13 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 TV YSD GF YLVY N L AAY L F +P S S W +F+LDQVF Y+ Sbjct: 66 TVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPATLSRS-----WVVFLLDQVFTYL 120
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 +L+A +A+ E+LYLA G + W C +G FC Sbjct: 121 ILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFC 155
>tr|Q0JEF7|Q0JEF7_ORYSJ Os04g0281900 protein OS=Oryza sativa subsp. japonica GN=Os04g0281900 PE=2 SV=1 Length = 209
Score = 77.8 bits (190), Expect = 4e-13 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 TV YSD GF YLVY N L AAY L F +P S S W +F+LDQVF Y+ Sbjct: 69 TVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPATLSRS-----WVVFLLDQVFTYL 123
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 +L+A +A+ E+LYLA G + W C +G FC Sbjct: 124 ILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFC 158
>tr|Q01MG8|Q01MG8_ORYSA OSIGBa0131F24.1 protein OS=Oryza sativa GN=OSIGBa0131F24.1 PE=4 SV=1 Length = 206
Score = 77.8 bits (190), Expect = 4e-13 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 TV YSD GF YLVY N L AAY L F +P S S W +F+LDQVF Y+ Sbjct: 66 TVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPATLSRS-----WVVFLLDQVFTYL 120
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 +L+A +A+ E+LYLA G + W C +G FC Sbjct: 121 ILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFC 155
>tr|B8ARW3|B8ARW3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15195 PE=4 SV=1 Length = 209
Score = 77.8 bits (190), Expect = 4e-13 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = +1
Query: 253 TVKYSDTSGFIYLVYINILVAAYGLI-VFVSLIPSALGKSCSGKCSRWTIFVLDQVFAYV 429 TV YSD GF YLVY N L AAY L F +P S S W +F+LDQVF Y+ Sbjct: 69 TVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPATLSRS-----WVVFLLDQVFTYL 123
Query: 430 LLSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 +L+A +A+ E+LYLA G + W C +G FC Sbjct: 124 ILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFC 158
>tr|A2X2I0|A2X2I0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06397 PE=4 SV=1 Length = 201
Score = 75.5 bits (184), Expect = 2e-12 Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Frame = +1
Query: 256 VKYSDTSGFIYLVYINILVAAYGLIVFVSLIPSALGKSCSGKCS-RWTIFVLDQVFAYVL 432 V++SD SGF YLV+IN + AAY + S L SC W IF+LDQ AY+L Sbjct: 60 VRFSDLSGFRYLVWINAITAAYS-------VASILLSSCRFITRFDWLIFILDQASAYLL 112
Query: 433 LSAVSAATEVLYLADKGMSKTQWEALCPTYGFFC 534 L++ SAA EV+YLA +G + W +C +G FC Sbjct: 113 LTSASAAAEVVYLAREGDREVSWGEVCSYFGRFC 146
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