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DK947080
Clone id YMU02A01NGRL0014_L18
Library
Length 153
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_L18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAAATCCGCGGGTCTTTGCCGATACACTACACGTAAAAATCGTCGTAACACACCCGCTC
GGCTGGAGTTAGAGAAGTATTGCTTCCATTGTCACAAGCATACCTTGCACAAAGAGTCGA
AGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q85FK1
Definition sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS=Adiantum capillus-veneris
Align length 39
Score (bit) 89.7
E-value 4.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947080|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_L18, 5'
         (119 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS...    90   4e-18
sp|Q6YXM3|RK33_PHYPA 50S ribosomal protein L33, chloroplastic OS...    65   1e-10
sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic OS...    65   1e-10
sp|P48958|RL33_SYNY3 50S ribosomal protein L33 OS=Synechocystis ...    64   2e-10
sp|P06392|RK33_MARPO 50S ribosomal protein L33, chloroplastic OS...    64   3e-10
sp|Q19V74|RK33_CHLAT 50S ribosomal protein L33, chloroplastic OS...    63   5e-10
sp|Q2JL27|RL33_SYNJB 50S ribosomal protein L33 OS=Synechococcus ...    62   9e-10
sp|B0JVN3|RL33_MICAN 50S ribosomal protein L33 OS=Microcystis ae...    62   9e-10
sp|B0C2J4|RL33_ACAM1 50S ribosomal protein L33 OS=Acaryochloris ...    62   9e-10
sp|A0T0D5|RK33_PHATR 50S ribosomal protein L33, chloroplastic OS...    62   9e-10
sp|Q32RT8|RK33_STAPU 50S ribosomal protein L33, chloroplastic OS...    62   1e-09
sp|Q5N502|RL33_SYNP6 50S ribosomal protein L33 OS=Synechococcus ...    61   2e-09
sp|Q31P67|RL33_SYNE7 50S ribosomal protein L33 OS=Synechococcus ...    61   2e-09
sp|P49565|RK33_ODOSI 50S ribosomal protein L33, chloroplastic OS...    61   2e-09
sp|Q10Y90|RL33_TRIEI 50S ribosomal protein L33 OS=Trichodesmium ...    61   2e-09
sp|Q3MDJ2|RL33_ANAVT 50S ribosomal protein L33 OS=Anabaena varia...    61   2e-09
sp|Q8YNV9|RL33_ANASP 50S ribosomal protein L33 OS=Anabaena sp. (...    61   2e-09
sp|A0T0R3|RK33_THAPS 50S ribosomal protein L33, chloroplastic OS...    61   2e-09
sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS...    60   3e-09
sp|Q9MUP5|RK33_MESVI 50S ribosomal protein L33, chloroplastic OS...    60   3e-09
sp|B1NWH1|RK33_MANES 50S ribosomal protein L33, chloroplastic OS...    60   3e-09
sp|B2XWM6|RK33_FAGEA 50S ribosomal protein L33, chloroplastic OS...    60   4e-09
sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS...    60   4e-09
sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS...    60   4e-09
sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS...    60   4e-09
sp|B0YPP9|RK33_ANEMR 50S ribosomal protein L33, plastid OS=Aneur...    60   4e-09
sp|Q7YJV5|RK33_CALFG 50S ribosomal protein L33, chloroplastic OS...    59   6e-09
sp|P41612|RK33_PINTH 50S ribosomal protein L33, chloroplastic OS...    59   8e-09
sp|Q7GUD1|RK33_PINKO 50S ribosomal protein L33, chloroplastic OS...    59   8e-09
sp|A2T354|RK33_ANGEV 50S ribosomal protein L33, chloroplastic OS...    59   8e-09

>sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic
           OS=Adiantum capillus-veneris GN=rpl33 PE=2 SV=2
          Length = 66

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKES 119
           KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKES
Sbjct: 26  KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKES 64


>sp|Q6YXM3|RK33_PHYPA 50S ribosomal protein L33, chloroplastic
           OS=Physcomitrella patens GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           K  G+ RYTT+KNRRNTP RLEL+K+C +C+KHT+HKE
Sbjct: 26  KKLGVSRYTTQKNRRNTPTRLELKKFCSYCNKHTIHKE 63


>sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic
           OS=Cryptomeria japonica GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           KS G+ RYTTRKNRRNTP RLEL+K+C +C+KHT+H E
Sbjct: 26  KSPGISRYTTRKNRRNTPLRLELKKFCPYCYKHTIHGE 63


>sp|P48958|RL33_SYNY3 50S ribosomal protein L33 OS=Synechocystis sp.
           (strain PCC 6803) GN=rpmG PE=3 SV=1
          Length = 65

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKES 119
           +S G+ RYTT KNRRNT ARLEL+K+C HC+KHT+HKE+
Sbjct: 26  RSNGVNRYTTMKNRRNTTARLELKKFCTHCNKHTIHKET 64


>sp|P06392|RK33_MARPO 50S ribosomal protein L33, chloroplastic
           OS=Marchantia polymorpha GN=rpl33 PE=3 SV=3
          Length = 65

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +  G+ RYTT+KNRRNTP RLEL+K+C +C+KHT+HKE
Sbjct: 25  RKKGISRYTTQKNRRNTPIRLELKKFCCYCNKHTIHKE 62


>sp|Q19V74|RK33_CHLAT 50S ribosomal protein L33, chloroplastic
           OS=Chlorokybus atmophyticus GN=rpl33 PE=3 SV=1
          Length = 64

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RYTT+KNRRNTP RLEL+K+C  C++HTLHKE
Sbjct: 25  RSPGVSRYTTQKNRRNTPNRLELKKFCSRCNQHTLHKE 62


>sp|Q2JL27|RL33_SYNJB 50S ribosomal protein L33 OS=Synechococcus sp.
           GN=rpmG PE=3 SV=1
          Length = 64

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RYTT KNRRNT ARLEL+K+C HC++HT+HKE
Sbjct: 25  RSPGVNRYTTTKNRRNTTARLELKKFCPHCNRHTVHKE 62


>sp|B0JVN3|RL33_MICAN 50S ribosomal protein L33 OS=Microcystis
           aeruginosa (strain NIES-843) GN=rpmG PE=3 SV=1
          Length = 64

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           ++ G+ RYTT KNRRNT  RLE++KYC HC+KHT+HKE
Sbjct: 25  RTPGVSRYTTSKNRRNTTGRLEIKKYCPHCNKHTVHKE 62


>sp|B0C2J4|RL33_ACAM1 50S ribosomal protein L33 OS=Acaryochloris
           marina (strain MBIC 11017) GN=rpmG PE=3 SV=1
          Length = 62

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RYTT KNRRNT +RLEL+K+C HC+KHT HKE
Sbjct: 23  RSPGVSRYTTTKNRRNTTSRLELKKFCTHCNKHTNHKE 60


>sp|A0T0D5|RK33_PHATR 50S ribosomal protein L33, chloroplastic
           OS=Phaeodactylum tricornutum GN=rpl33 PE=3 SV=1
          Length = 64

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RY+T+KNRRN P RLEL+KYC HC+K TLHKE
Sbjct: 25  RSPGVSRYSTQKNRRNNPERLELKKYCSHCNKTTLHKE 62
tr_hit_id B8HWY6
Definition tr|B8HWY6|B8HWY6_9CHRO Ribosomal protein L33 OS=Cyanothece sp. PCC 7425
Align length 38
Score (bit) 65.5
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947080|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_L18, 5'
         (119 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8HWY6|B8HWY6_9CHRO Ribosomal protein L33 OS=Cyanothece sp. P...    65   1e-09
tr|B7KBE3|B7KBE3_9CHRO Ribosomal protein L33 OS=Cyanothece sp. P...    65   2e-09
tr|A0YR61|A0YR61_9CYAN 50S ribosomal protein L33 OS=Lyngbya sp. ...    63   6e-09
tr|B2J0D4|B2J0D4_NOSP7 Ribosomal protein L33 OS=Nostoc punctifor...    63   8e-09
tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia lepidozi...    63   8e-09
tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria david...    62   1e-08
tr|A8YF81|A8YF81_MICAE 50S ribosomal protein L33 OS=Microcystis ...    62   1e-08
tr|A0ZC91|A0ZC91_NODSP 50S ribosomal protein L33 OS=Nodularia sp...    61   3e-08
tr|B8LEU0|B8LEU0_THAPS Predicted protein OS=Thalassiosira pseudo...    61   3e-08
tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment) OS=T...    60   4e-08
tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1            60   4e-08
tr|Q4BZP3|Q4BZP3_CROWT 50S ribosomal protein L33 OS=Crocosphaera...    60   5e-08
tr|Q4FG91|Q4FG91_GINBI 50S ribosomal protein L33 (Fragment) OS=G...    60   7e-08
tr|Q05SV2|Q05SV2_9SYNE 50S ribosomal protein L33 OS=Synechococcu...    59   9e-08
tr|Q4FG89|Q4FG89_RANMC 50S ribosomal protein L33 (Fragment) OS=R...    59   9e-08
tr|B1XPV1|B1XPV1_SYNP2 Ribosomal protein L33 OS=Synechococcus sp...    59   1e-07
tr|B7JW32|B7JW32_SYNP8 Ribosomal protein L33 OS=Synechococcus sp...    59   1e-07
tr|B5IJW8|B5IJW8_9CHRO Ribosomal protein L33 OS=Cyanobium sp. PC...    59   1e-07
tr|A3IXH6|A3IXH6_9CHRO 50S ribosomal protein L33 OS=Cyanothece s...    59   1e-07
tr|B1WYB2|B1WYB2_CYAA5 50S ribosomal protein L33 OS=Cyanothece (...    59   2e-07
tr|B7T1Q7|B7T1Q7_VAULI Ribosomal protein L33 OS=Vaucheria litore...    59   2e-07
tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus banca...    58   2e-07
tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinife...    58   2e-07
tr|A3Z2C1|A3Z2C1_9SYNE 50S ribosomal protein L33 OS=Synechococcu...    58   3e-07
tr|Q4FG90|Q4FG90_NUPAD 50S ribosomal protein L33 (Fragment) OS=N...    58   3e-07
tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment) OS=T...    57   4e-07
tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=M...    57   4e-07
tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment) OS=Y...    57   5e-07
tr|A9QBB4|A9QBB4_ELAOL 50S ribosomal protein L33 (Fragment) OS=E...    57   5e-07
tr|A3Z6Q5|A3Z6Q5_9SYNE 50S ribosomal protein L33 OS=Synechococcu...    57   6e-07

>tr|B8HWY6|B8HWY6_9CHRO Ribosomal protein L33 OS=Cyanothece sp. PCC
           7425 GN=Cyan7425_0903 PE=4 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +SAG+ RYTT KNRRNT ARLEL K+C HC+KHT+HKE
Sbjct: 23  RSAGVSRYTTTKNRRNTTARLELNKFCPHCNKHTVHKE 60


>tr|B7KBE3|B7KBE3_9CHRO Ribosomal protein L33 OS=Cyanothece sp. PCC
           7424 GN=PCC7424_3097 PE=4 SV=1
          Length = 64

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +SAG+ RYTT KNRRNT  RLEL+K+C HC+KHT+HKE
Sbjct: 25  RSAGVSRYTTSKNRRNTTGRLELKKFCTHCNKHTVHKE 62


>tr|A0YR61|A0YR61_9CYAN 50S ribosomal protein L33 OS=Lyngbya sp. PCC
           8106 GN=L8106_11842 PE=3 SV=1
          Length = 62

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RYTT KNRRNT +RLEL+K+C HC+KHT+HKE
Sbjct: 23  RSKGVSRYTTEKNRRNTSSRLELKKFCPHCNKHTVHKE 60


>tr|B2J0D4|B2J0D4_NOSP7 Ribosomal protein L33 OS=Nostoc punctiforme
           (strain ATCC 29133 / PCC 73102) GN=Npun_R4941 PE=4 SV=1
          Length = 64

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +SAG+ RYT+ KNRRNT  RLEL+K+C HC+KHT+HKE
Sbjct: 25  RSAGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVHKE 62


>tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia
           lepidozioides GN=rpl33 PE=4 SV=1
          Length = 65

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +3

Query: 12  GLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           G+ RYTT+KNRRNTP RLEL+K+C +C+KHT+HKE
Sbjct: 28  GVSRYTTKKNRRNTPTRLELKKFCPYCNKHTIHKE 62


>tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria
           davidiana GN=rpl33 PE=4 SV=1
          Length = 68

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           K  G+ RYTTRKNRRNTP RLEL+K+C +C+KHT+H E
Sbjct: 26  KFPGISRYTTRKNRRNTPIRLELKKFCPYCYKHTIHGE 63


>tr|A8YF81|A8YF81_MICAE 50S ribosomal protein L33 OS=Microcystis
           aeruginosa PCC 7806 GN=IPF_5488 PE=3 SV=1
          Length = 64

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           ++ G+ RYTT KNRRNT  RLE++KYC HC+KHT+HKE
Sbjct: 25  RTPGVSRYTTSKNRRNTTGRLEIKKYCPHCNKHTVHKE 62


>tr|A0ZC91|A0ZC91_NODSP 50S ribosomal protein L33 OS=Nodularia
           spumigena CCY 9414 GN=N9414_00420 PE=3 SV=1
          Length = 64

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RYT+ KNRRNT  RLEL+K+C HC+KHT+HKE
Sbjct: 25  RSPGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVHKE 62


>tr|B8LEU0|B8LEU0_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_bd1243 PE=4 SV=1
          Length = 64

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +SAG+ RY T+KNRRN P R+EL+KYC HC+K T+HKE
Sbjct: 25  RSAGVSRYLTQKNRRNNPQRMELKKYCPHCNKPTIHKE 62


>tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment)
           OS=Typha latifolia GN=rpl33 PE=3 SV=1
          Length = 66

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   KSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 116
           +S G+ RY T+KNR NTP+RLEL K+C +CHKHT+H E
Sbjct: 26  ESPGISRYITQKNRHNTPSRLELRKFCRYCHKHTIHGE 63