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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947081
Clone id YMU02A01NGRL0014_L19
Library
Length 480
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_L19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ACGATCACCTCTTGATTTTCCCATTGAATGGGAGAGACCCCGACCTGGAAGACGGCCAGA
TATTTTTCCGCAGTTCAGTCCAATGAAAACTCCACTCCCTCAGCCTCCTCCAACTGATCC
TCCAGAGGAAGATGAAGAGGAAGAGAAAAAAGAAGAAGAAGAGAAGCCAGAGGAGGAGCC
TGATACACCACCTAAAGAAACATGATTCTTACTGGTCTTCTCAGTAATGGTGTTTTGGGT
GAGCTGGGTGGTGTGCTTCAAAGAGGTGACTGATTTTTTCAAAGCTAACGGGGTGCAAGA
ATTGCCAAACCTGGTTTCTGCTCTCACACTCTTCATCAACTTGTAATGTGCTACCCATCC
TGAGTTGATTTGCAGTTCAGCCAATATAGTTAGGCGCAGGTCTTTAACATATGTATTTTT
CATTATTATTGTTGATGACTCCTAGCAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947081|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_L19, 5'
         (451 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A7P7B9
Definition tr|A7P7B9|A7P7B9_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera
Align length 33
Score (bit) 76.3
E-value 7.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947081|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_L19, 5'
         (451 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P7B9|A7P7B9_VITVI Chromosome chr9 scaffold_7, whole genome ...    76   7e-13
tr|B6UA24|B6UA24_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|B6U119|B6U119_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|B6TEN8|B6TEN8_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|B6SN44|B6SN44_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|Q9SII4|Q9SII4_ARATH Expressed protein (Putative uncharacteriz...    74   5e-12
tr|Q6K5Y3|Q6K5Y3_ORYSJ Os02g0614200 protein OS=Oryza sativa subs...    74   5e-12
tr|B8AFF4|B8AFF4_ORYSI Putative uncharacterized protein OS=Oryza...    74   5e-12
tr|A9RTT9|A9RTT9_PHYPA Predicted protein OS=Physcomitrella paten...    73   6e-12
tr|A9RFX0|A9RFX0_PHYPA Predicted protein OS=Physcomitrella paten...    73   6e-12
tr|A9PBZ2|A9PBZ2_POPTR Putative uncharacterized protein OS=Popul...    73   6e-12
tr|A7PEQ7|A7PEQ7_VITVI Chromosome chr11 scaffold_13, whole genom...    73   6e-12
tr|Q9LV56|Q9LV56_ARATH Gb|AAD25142.1 (Putative uncharacterized p...    72   1e-11
tr|Q8GWM3|Q8GWM3_ARATH Putative uncharacterized protein At3g2450...    72   1e-11
tr|Q8LE64|Q8LE64_ARATH Putative uncharacterized protein OS=Arabi...    69   9e-11
tr|A3A914|A3A914_ORYSJ Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|A8JCL4|A8JCL4_CHLRE Predicted protein OS=Chlamydomonas reinha...    47   4e-04
tr|A4RRA5|A4RRA5_OSTLU Predicted protein OS=Ostreococcus lucimar...    44   0.003
tr|Q6GZT3|Q6GZT3_FRG3V Putative uncharacterized protein OS=Frog ...    37   0.65 
tr|Q2G9H9|Q2G9H9_NOVAD RhaT l-rhamnose-proton symport 2 OS=Novos...    33   7.1  

>tr|A7P7B9|A7P7B9_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034399001
           PE=4 SV=1
          Length = 84

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWERP+PGRRPDIFPQFSPMKTPLP
Sbjct: 11  RSPLDFPIEWERPKPGRRPDIFPQFSPMKTPLP 43


>tr|B6UA24|B6UA24_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 131

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWERP+PGRRPDIFP+FSPMKTPLP
Sbjct: 53  RSPLDFPIEWERPKPGRRPDIFPKFSPMKTPLP 85


>tr|B6U119|B6U119_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 140

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWERP+PGRRPDIFP+FSPMKTPLP
Sbjct: 62  RSPLDFPIEWERPKPGRRPDIFPKFSPMKTPLP 94


>tr|B6TEN8|B6TEN8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 145

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWERP+PGRRPDIFP+FSPMKTPLP
Sbjct: 66  RSPLDFPIEWERPKPGRRPDIFPKFSPMKTPLP 98


>tr|B6SN44|B6SN44_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 141

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWERP+PGRRPDIFP+FSPMKTPLP
Sbjct: 62  RSPLDFPIEWERPKPGRRPDIFPKFSPMKTPLP 94


>tr|Q9SII4|Q9SII4_ARATH Expressed protein (Putative uncharacterized
           protein) (At2g17240/T23A1.10) OS=Arabidopsis thaliana
           GN=At2g17240 PE=2 SV=1
          Length = 140

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           R+PLDFPIEWERP+PGRRPDIFP+FSPMKTPLP
Sbjct: 71  RNPLDFPIEWERPKPGRRPDIFPKFSPMKTPLP 103


>tr|Q6K5Y3|Q6K5Y3_ORYSJ Os02g0614200 protein OS=Oryza sativa subsp.
           japonica GN=OJ2055_H10.18 PE=2 SV=1
          Length = 144

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWE+P+PGRRPDIFP+FSPMKTPLP
Sbjct: 66  RSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLP 98


>tr|B8AFF4|B8AFF4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08059 PE=4 SV=1
          Length = 144

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEWE+P+PGRRPDIFP+FSPMKTPLP
Sbjct: 66  RSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLP 98


>tr|A9RTT9|A9RTT9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_56105 PE=4 SV=1
          Length = 78

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEW+RPRPGRR DIFPQFSPMKTPLP
Sbjct: 11  RSPLDFPIEWDRPRPGRRADIFPQFSPMKTPLP 43


>tr|A9RFX0|A9RFX0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65594 PE=4 SV=1
          Length = 79

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +2

Query: 2   RSPLDFPIEWERPRPGRRPDIFPQFSPMKTPLP 100
           RSPLDFPIEW+RPRPGRR DIFPQFSPMKTPLP
Sbjct: 11  RSPLDFPIEWDRPRPGRRADIFPQFSPMKTPLP 43