DK947085 |
Clone id |
YMU02A01NGRL0014_L24 |
Library |
YMU02 |
Length |
496 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_L24. 5' end sequence. |
Accession |
DK947085 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL21Contig1 |
Sequence |
GGTGTGACGGTGTGTTTGTTGGGTCTGGTATCTTCAAAAGTGGCAACCCCTCTCAGCGTG TTCGAGCCATAGTTTCTGCTGTGACTCACTTCAATGACCCTAGCATTATAGCAGATGTCA GCTGCGGTTTGGGTGAAGCTATGGTGGGTATCAATCTTAATGACAAGAAAGTTGAGCGCT TTGCTGCAAGGTCTGATTAATGTGGAGAATGGATTCGTACAAATGCTGTATGTGTTGTGT GTCACTACGGGTGAGGCATCCGAGGCTTGTGTTCAAGCCCTTGTTGTTCAGCAAGTTGTT ATGGTAGATAGTACTTTAGTTCACTTAGAACTCTTTGTCTGATTGCCTTTGGTTATTGGC AGTGCTGGTAGACCATTTAACGGAACCATTCATTCTCACTCCAGCAGAACCTGAGCAACC TGGGAACATGGAAACTGGAATTGTAATGCTTACAACAGAAAATATAAATAAGCTTTTTGG CAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39963 |
Definition |
sp|Q39963|PDX1_HEVBR Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis |
Align length |
65 |
Score (bit) |
112.0 |
E-value |
9.0e-25 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FRZ2 |
Definition |
tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
65 |
Score (bit) |
110.0 |
E-value |
3.0e-23 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947085|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_L24, 5' (481 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 110 3e-23 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 110 3e-23 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 109 6e-23 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 109 6e-23 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 108 1e-22 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 108 2e-22 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 107 2e-22 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 106 7e-22 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 105 1e-21 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 105 1e-21 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 104 2e-21 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 104 2e-21 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 103 4e-21 tr|A3C1S6|A3C1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 103 4e-21 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 103 6e-21 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 102 1e-20 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 100 3e-20 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 90 5e-17 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 90 6e-17 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 88 2e-16 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 87 5e-16 tr|B7A686|B7A686_THEAQ Pyridoxine biosynthesis protein OS=Thermu... 85 2e-15 tr|A8KZF1|A8KZF1_FRASN Pyridoxine biosynthesis protein OS=Franki... 84 3e-15 tr|B6QFZ9|B6QFZ9_PENMA Pyridoxine biosynthesis protein OS=Penici... 84 5e-15 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 83 6e-15 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 83 6e-15 tr|A4FB94|A4FB94_SACEN Putative pyridoxine biosynthesis protein ... 83 8e-15 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 83 8e-15 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 83 8e-15
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 110 bits (276), Expect = 3e-23 Identities = 52/65 (80%), Positives = 61/65 (93%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSGIFKSG+P++R RAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER+ Sbjct: 253 CDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVERY 312
Query: 183 AARSD 197 AARS+ Sbjct: 313 AARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 110 bits (276), Expect = 3e-23 Identities = 52/65 (80%), Positives = 61/65 (93%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSGIFKSG+P++R RAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER+ Sbjct: 316 CDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVERY 375
Query: 183 AARSD 197 AARS+ Sbjct: 376 AARSE 380
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 109 bits (273), Expect = 6e-23 Identities = 51/65 (78%), Positives = 60/65 (92%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSGIFKSG+P++R RAIV AVTH++DP+I+ DVS GLGEAMVGINLND KVER+ Sbjct: 253 CDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILTDVSAGLGEAMVGINLNDPKVERY 312
Query: 183 AARSD 197 AARS+ Sbjct: 313 AARSE 317
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 109 bits (273), Expect = 6e-23 Identities = 49/65 (75%), Positives = 60/65 (92%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSG+FKSG+P++R RAIV AVTH++DP ++A+VSCGLGEAMVGINLND KVER+ Sbjct: 133 CDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDKVERY 192
Query: 183 AARSD 197 A RS+ Sbjct: 193 ANRSE 197
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 108 bits (271), Expect = 1e-22 Identities = 50/65 (76%), Positives = 59/65 (90%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSG+FKSG+P++R RAIV AVTH++DP I+A+VSCGLGEAMVGINL D KVERF Sbjct: 247 CDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLTDDKVERF 306
Query: 183 AARSD 197 A RS+ Sbjct: 307 ANRSE 311
>tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 318
Score = 108 bits (269), Expect = 2e-22 Identities = 51/65 (78%), Positives = 60/65 (92%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSGIFKSG+P++R RAIV AVTH++DP I+A+VS GLGEAMVGINL+D KVERF Sbjct: 254 CDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSDPKVERF 313
Query: 183 AARSD 197 AARS+ Sbjct: 314 AARSE 318
>tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021866 PE=4 SV=1 Length = 298
Score = 108 bits (269), Expect = 2e-22 Identities = 51/65 (78%), Positives = 60/65 (92%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSGIFKSG+P++R RAIV AVTH++DP I+A+VS GLGEAMVGINL+D KVERF Sbjct: 234 CDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSDPKVERF 293
Query: 183 AARSD 197 AARS+ Sbjct: 294 AARSE 298
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 107 bits (268), Expect = 2e-22 Identities = 47/65 (72%), Positives = 59/65 (90%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSG+FKSG+P++R RAIV AVTH++DP ++A++SCGLGEAMVG+NLND VERF Sbjct: 246 CDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLNDSNVERF 305
Query: 183 AARSD 197 A RS+ Sbjct: 306 ANRSE 310
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 106 bits (264), Expect = 7e-22 Identities = 48/65 (73%), Positives = 58/65 (89%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSG+FKSG+P++R RAIV AVTH++DP I+A+VSCGLGEAMVG+NL D VERF Sbjct: 250 CDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGLNLTDHNVERF 309
Query: 183 AARSD 197 A RS+ Sbjct: 310 ANRSE 314
>tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Triticum aestivum PE=2 SV=1 Length = 314
Score = 105 bits (262), Expect = 1e-21 Identities = 50/64 (78%), Positives = 58/64 (90%) Frame = +3
Query: 3 CDGVFVGSGIFKSGNPSQRVRAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERF 182 CDGVFVGSGIFKSG+P++R RAIV AVTH++DP I+A+VS GLGEAMVGINL+D VERF Sbjct: 250 CDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEILANVSAGLGEAMVGINLSDPNVERF 309
Query: 183 AARS 194 AARS Sbjct: 310 AARS 313
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