DK947091 [AcEST]

DK947091
Clone id	YMU02A01NGRL0014_M06
Library	YMU02
Length	546
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_M06. 5' end sequence.
Accession	DK947091
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1571Contig1
Sequence	GCAGACGAAAGGAGATTTCAAGAGCTCTATCCCTTTTACGCCTCTCCGGCCGCCGCCCAA CTCACTACCCTCAGAATTGGCCTGCACATTTATCCCTTTCCTAGACCTCAATGTGCCTTG TTGTGCCAAAGGAGATGCATGTTGAAGAGATACAATTGGTCAATCCTGAGTACAGCAGCT TTCTCTTCCCATGCTTGTCACATGGAAAGGAAAGCAGCTGTATTTAAGTGATGGTCATCA GTATAGGGCTGTTTTATTTCTGTGTTTTTGCTAGTTGTAGTATAAGATACAGCAATGTGA GGCATGTGCAGATGATGCCCCTTGCTACTGATCTCTGCTGATATCAAGCAATCATGTATG ATTGACATGAGATATCCCTTCCTATAAATACGGTGCTGATTTGCAATATTTACATTCGTT TAAATTATGGTGCCNNNNNNNNAANANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA NAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAGGAAAAAAAAAAAAA AAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P08251
Definition	sp\|P08251\|AT1B1_CHICK Sodium/potassium-transporting ATPase subunit beta-1 OS=Gallus gallus
Align length	36
Score (bit)	29.6
E-value	5.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947091\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_M06, 5' (434 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P08251\|AT1B1_CHICK Sodium/potassium-transporting ATPase subun... 30 5.6 >sp\|P08251\|AT1B1_CHICK Sodium/potassium-transporting ATPase subunit beta-1 OS=Gallus gallus GN=ATP1B1 PE=2 SV=1 Length = 305 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +2 Query: 29 IPFTPLRPPPNSLPSELACTFIPFLDLNVPCCAKGD 136 I F P P SLPS+LA + P+L + V C AK D Sbjct: 185 IGFKPKAPENESLPSDLAGKYNPYL-IPVHCVAKRD 219
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947091\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_M06, 5' (434 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****