DK947102
Clone id YMU02A01NGRL0014_M21
Library
Length 332
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_M21. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGCGGCGGCTACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCTGCTTCGTCC
GAGCGCGTCTTCTGTCCGGTGTGTACGCATCCTCTTTAATTTCCTTGTGTGACGTTTCCC
GCGCCGTTAATAATGTATACATTAGGCCTACGTAGTGTCTCACTTCTCATGTATGTTCCA
AAGCCCACTCCAAGCTTACTGCAAGCTTTCGAGTTTTCTCAATGGTTGTCAGGCACTTGA
GTACTTTCTATATCATATGCTTACTTTTGACTTTACTTAAGCATTGAGATTAAATTCTTC
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q7ZZH7
Definition sp|Q7ZZH7|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis
Align length 76
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947102|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_M21, 5'
(302 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7ZZH7|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis G... 30 4.9

>sp|Q7ZZH7|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis
GN=dbf4 PE=1 SV=1
Length = 661

Score = 29.6 bits (65), Expect = 4.9
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2

Query: 268 KSKHMI*KVLKCLTTIEKTRKLAVSLEWALE--HT*EVRHYVGLMYTLLTARETSHKEIK 95
+ K ++ + +K + K L+ +L W ++ H E +HY+ T L S +K
Sbjct: 120 RGKSLVKRAIKEQEILPKNSILSNALNWGVKILHVEEAKHYIEKKKTALQQVRKSQPVVK 179

Query: 94 EDAYTPDRRRARTKQL 47
++ RR+ + ++L
Sbjct: 180 VESKPQTRRKVKPQKL 195


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947102|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_M21, 5'
(302 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******