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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947107
Clone id YMU02A01NGRL0014_N02
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_N02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAGACTATCAAGGATGCAATTGCAGCTCTGAACCAAGAGGTCATGCAAATCGGACAATCA
ATCTACAGCGGAGGTGGTGGTGGGGCCGGGCCTGCGCCAGGAGATGCCTCTGGTCCTGGG
CCAAATGCAGGTGGTTCAACAAAGAGCCCAGGAGGTGATGACGTAATTGATGCAGACTTT
ACTGATAGTGCGTAAGCTCCTTTTGTGGCGATTGGTTGTTGCATCTGGAATGAGCAAAGT
GCAATAGTCCAATGCGGACCTCTGGACTATAAGTTTTCTGGAGAGAGTCCACTCAATTTT
GCTACTCTTGAGGATTTTTTAGCTTTAATGTAAAGTAGTAGCTGTCCTCAATGGACGCAT
TTTTACACACATGGTTATATCTAGCTGTTGCCCACCATTTTGTGGGCCAATATGAAGATA
ATGGTGATGAAGACAGTGTTTCGTTTGTTCAGAGGCCGTCGAAAAACTTTTTTGGAAAAA
AAAAAAAAAAAGAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q02028
Definition sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum
Align length 63
Score (bit) 50.4
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947107|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_N02, 5'
         (475 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, c...    50   4e-06
sp|Q08080|HSP7S_SPIOL Stromal 70 kDa heat shock-related protein,...    39   0.009
sp|Q8YW74|DNAK2_ANASP Chaperone protein dnaK2 OS=Anabaena sp. (s...    32   1.1  
sp|P19703|RDRP_INCJJ RNA-directed RNA polymerase catalytic subun...    30   4.2  
sp|Q9IMP4|RDRP_INCJH RNA-directed RNA polymerase catalytic subun...    30   4.2  
sp|Q6I7C3|RDRP_INCAA RNA-directed RNA polymerase catalytic subun...    30   4.2  
sp|Q7V9G2|DNAK2_PROMA Chaperone protein dnaK2 OS=Prochlorococcus...    30   7.2  

>sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein,
           chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1
          Length = 706

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 29/63 (46%), Positives = 33/63 (52%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           +TIKDA+AALNQEVMQ+GQS+Y                         K     DVIDADF
Sbjct: 643 QTIKDALAALNQEVMQLGQSLYNQPGAAGQAGPTPPGSESGPSESSGKEGPEGDVIDADF 702

Query: 181 TDS 189
           TDS
Sbjct: 703 TDS 705


>sp|Q08080|HSP7S_SPIOL Stromal 70 kDa heat shock-related protein,
           chloroplastic (Fragment) OS=Spinacia oleracea GN=CHSP70
           PE=2 SV=1
          Length = 599

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIY 66
           + IKDA+AALNQEVMQ+GQS+Y
Sbjct: 523 QAIKDAMAALNQEVMQLGQSLY 544


>sp|Q8YW74|DNAK2_ANASP Chaperone protein dnaK2 OS=Anabaena sp.
           (strain PCC 7120) GN=dnaK2 PE=2 SV=1
          Length = 633

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           E IK     L Q +  +G +IY                        T S GGDDVIDADF
Sbjct: 576 EQIKKLTPELQQALFAVGSNIYQQAGGGAAPGAAPQDGGT------TSSDGGDDVIDADF 629

Query: 181 TDS 189
           T++
Sbjct: 630 TET 632


>sp|P19703|RDRP_INCJJ RNA-directed RNA polymerase catalytic subunit
           OS=Influenza C virus (strain C/JJ/1950) GN=PB1 PE=3 SV=1
          Length = 754

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -1

Query: 466 FFDGL*TNETLSSSPLSSYWPTKWWATARYNHVCK----NASIEDSY 338
           F+ GL +++      ++S W    W   R+N VCK    N S+E SY
Sbjct: 438 FWTGLQSSDDFVLFAVASNWSNIHWTIRRFNAVCKLIGINMSLEKSY 484


>sp|Q9IMP4|RDRP_INCJH RNA-directed RNA polymerase catalytic subunit
           OS=Influenza C virus (strain C/Johannesburg/1/1966)
           GN=PB1 PE=3 SV=2
          Length = 754

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -1

Query: 466 FFDGL*TNETLSSSPLSSYWPTKWWATARYNHVCK----NASIEDSY 338
           F+ GL +++      ++S W    W   R+N VCK    N S+E SY
Sbjct: 438 FWTGLQSSDDFVLFAVASNWSNIHWTIRRFNAVCKLIGINMSLEKSY 484


>sp|Q6I7C3|RDRP_INCAA RNA-directed RNA polymerase catalytic subunit
           OS=Influenza C virus (strain C/Ann Arbor/1/1950) GN=PB1
           PE=3 SV=1
          Length = 754

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -1

Query: 466 FFDGL*TNETLSSSPLSSYWPTKWWATARYNHVCK----NASIEDSY 338
           F+ GL +++      ++S W    W   R+N VCK    N S+E SY
Sbjct: 438 FWTGLQSSDDFVLFAVASNWSNIHWTIRRFNAVCKLIGINMSLEKSY 484


>sp|Q7V9G2|DNAK2_PROMA Chaperone protein dnaK2 OS=Prochlorococcus
           marinus GN=dnaK2 PE=2 SV=1
          Length = 633

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           ET+K  +  L +E+  +G S+Y                          + G DDVIDA+F
Sbjct: 576 ETMKTLVEDLQKELYSLGASVYQQSNAASQAADGTSSESN------NSTEGNDDVIDAEF 629

Query: 181 TDS 189
           T+S
Sbjct: 630 TES 632
tr_hit_id B8LM05
Definition tr|B8LM05|B8LM05_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 63
Score (bit) 54.7
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947107|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_N02, 5'
         (475 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LM05|B8LM05_PICSI Putative uncharacterized protein OS=Picea...    55   2e-06
tr|B8LLU0|B8LLU0_PICSI Putative uncharacterized protein OS=Picea...    55   2e-06
tr|Q9STW6|Q9STW6_ARATH Hsp 70-like protein OS=Arabidopsis thalia...    54   5e-06
tr|A9RFC9|A9RFC9_PHYPA Predicted protein OS=Physcomitrella paten...    51   3e-05
tr|B8A3D0|B8A3D0_MAIZE Putative uncharacterized protein OS=Zea m...    51   3e-05
tr|A9T251|A9T251_PHYPA Predicted protein OS=Physcomitrella paten...    51   3e-05
tr|Q9SEW1|Q9SEW1_WHEAT Heat shock protein 70 OS=Triticum aestivu...    50   7e-05
tr|Q0DJB9|Q0DJB9_ORYSJ Os05g0303000 protein (Fragment) OS=Oryza ...    50   7e-05
tr|B1A010|B1A010_IPONI Chloroplast heat shock protein 70-2 OS=Ip...    50   7e-05
tr|A3B2D0|A3B2D0_ORYSJ Putative uncharacterized protein OS=Oryza...    50   7e-05
tr|A2Y2Y4|A2Y2Y4_ORYSI Putative uncharacterized protein OS=Oryza...    50   7e-05
tr|Q1SKX2|Q1SKX2_MEDTR Chaperone DnaK OS=Medicago truncatula GN=...    49   2e-04
tr|B1A009|B1A009_IPONI Chloroplast heat shock protein 70-1 OS=Ip...    49   2e-04
tr|B6UFB3|B6UFB3_MAIZE Stromal 70 kDa heat shock-related protein...    48   3e-04
tr|A7PQC7|A7PQC7_VITVI Chromosome chr18 scaffold_24, whole genom...    48   3e-04
tr|A5AT21|A5AT21_VITVI Putative uncharacterized protein OS=Vitis...    48   3e-04
tr|Q9M637|Q9M637_ARATH Heat shock protein 70 OS=Arabidopsis thal...    47   5e-04
tr|Q9LTX9|Q9LTX9_ARATH Heat shock protein 70 OS=Arabidopsis thal...    47   5e-04
tr|A4ZYQ0|A4ZYQ0_PENAM Chloroplast heat shock protein 70 OS=Penn...    47   6e-04
tr|Q84P99|Q84P99_ORYSJ Heat shock-related protein (Fragment) OS=...    46   8e-04
tr|Q2QV45|Q2QV45_ORYSJ 70 kDa heat shock protein OS=Oryza sativa...    46   8e-04
tr|O50036|O50036_SPIOL Heat shock 70 protein OS=Spinacia olerace...    46   8e-04
tr|O04056|O04056_CITLA Heat shock protein 70 OS=Citrullus lanatu...    46   8e-04
tr|B8BP25|B8BP25_ORYSI Putative uncharacterized protein OS=Oryza...    46   8e-04
tr|A3CG93|A3CG93_ORYSJ Putative uncharacterized protein OS=Oryza...    46   8e-04
tr|A7PGX4|A7PGX4_VITVI Chromosome chr17 scaffold_16, whole genom...    46   0.001
tr|A9PIM7|A9PIM7_POPJC Putative uncharacterized protein OS=Popul...    45   0.002
tr|Q39641|Q39641_CUCSA Heat shock protein 70 OS=Cucumis sativus ...    45   0.002
tr|A2TJV6|A2TJV6_CUCSA Chloroplast HSP70 OS=Cucumis sativus PE=3...    45   0.002
tr|A8W7B5|A8W7B5_SOLLC Heat shock protein 70 OS=Solanum lycopers...    42   0.015

>tr|B8LM05|B8LM05_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 708

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           +++KD +AALNQEVMQ+GQS+Y                         K+PGGDDVIDADF
Sbjct: 648 QSMKDTMAALNQEVMQLGQSLYNQPGAAGGPTTGGEAGPGSSGG---KAPGGDDVIDADF 704

Query: 181 TDS 189
           TDS
Sbjct: 705 TDS 707


>tr|B8LLU0|B8LLU0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 709

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           +++KD +AALNQEVMQ+GQS+Y                         K+PGGDDVIDADF
Sbjct: 649 QSMKDTMAALNQEVMQLGQSLYNQPGPAGGPTAGGEAGPGSPGG---KTPGGDDVIDADF 705

Query: 181 TDS 189
           TDS
Sbjct: 706 TDS 708


>tr|Q9STW6|Q9STW6_ARATH Hsp 70-like protein OS=Arabidopsis thaliana
           GN=T22A6.110 PE=2 SV=1
          Length = 718

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPG--GDDVIDA 174
           + IKDA+AALNQEVMQIGQS+Y                        + S G  GDDVIDA
Sbjct: 653 QEIKDAMAALNQEVMQIGQSLYNQPGAGGPGAGPSPGGEGASSGDSSSSKGGDGDDVIDA 712

Query: 175 DFTDS 189
           DFTDS
Sbjct: 713 DFTDS 717


>tr|A9RFC9|A9RFC9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_113309 PE=3 SV=1
          Length = 677

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 30/63 (47%), Positives = 35/63 (55%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           +++KDAIAALNQEVMQ GQS+Y                          + GGDDVIDADF
Sbjct: 619 QSMKDAIAALNQEVMQFGQSLYNQPGGAPEGSAPGAQGSSTG-----PAAGGDDVIDADF 673

Query: 181 TDS 189
           TDS
Sbjct: 674 TDS 676


>tr|B8A3D0|B8A3D0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 622

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 28/63 (44%), Positives = 34/63 (53%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           +T+KDA++ALNQEVMQIGQ++Y                         K   G DVIDADF
Sbjct: 559 QTMKDAMSALNQEVMQIGQALYSQQGAPGAGPGAADASSAGSAGTSEKPGDGGDVIDADF 618

Query: 181 TDS 189
           TDS
Sbjct: 619 TDS 621


>tr|A9T251|A9T251_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_232922 PE=3 SV=1
          Length = 641

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 29/63 (46%), Positives = 36/63 (57%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           +++KDA+AALNQEVMQ+GQS+Y                          + GGDDVIDADF
Sbjct: 581 QSMKDAMAALNQEVMQLGQSLYNQPGAGGAPEGGAPGGQGSSSG---PAAGGDDVIDADF 637

Query: 181 TDS 189
           TDS
Sbjct: 638 TDS 640


>tr|Q9SEW1|Q9SEW1_WHEAT Heat shock protein 70 OS=Triticum aestivum
           GN=HSP70 PE=2 SV=1
          Length = 376

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPG-GDDVIDAD 177
           +TIKDA+AALNQEVMQ+GQS+Y                        ++  G G DVIDAD
Sbjct: 312 QTIKDALAALNQEVMQLGQSLYQQQGSGPTPGADGAADSTGPGPGPSEKTGDGGDVIDAD 371

Query: 178 FTDS 189
           F DS
Sbjct: 372 FIDS 375


>tr|Q0DJB9|Q0DJB9_ORYSJ Os05g0303000 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os05g0303000 PE=3 SV=1
          Length = 459

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGD--DVIDA 174
           +T+KDA+AALNQEVMQ+GQ++Y                         K PGG+  DVIDA
Sbjct: 395 QTMKDALAALNQEVMQLGQALYSQQGAPGAGPTPGADAAAGSAGPSEK-PGGEEGDVIDA 453

Query: 175 DFTDS 189
           DFTDS
Sbjct: 454 DFTDS 458


>tr|B1A010|B1A010_IPONI Chloroplast heat shock protein 70-2
           OS=Ipomoea nil PE=2 SV=1
          Length = 700

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 29/63 (46%), Positives = 34/63 (53%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGDDVIDADF 180
           + +KDA+AALNQEVMQ+GQS+Y                         K P G DVIDADF
Sbjct: 638 QAMKDAMAALNQEVMQLGQSLYNQPSASPGAGPTPGGGSAGPSESSGKGPDG-DVIDADF 696

Query: 181 TDS 189
           TDS
Sbjct: 697 TDS 699


>tr|A3B2D0|A3B2D0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017202 PE=3 SV=1
          Length = 689

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   ETIKDAIAALNQEVMQIGQSIYXXXXXXXXXXXXXXXXXXXXXXXXTKSPGGD--DVIDA 174
           +T+KDA+AALNQEVMQ+GQ++Y                         K PGG+  DVIDA
Sbjct: 625 QTMKDALAALNQEVMQLGQALYSQQGAPGAGPTPGADAAAGSAGPSEK-PGGEEGDVIDA 683

Query: 175 DFTDS 189
           DFTDS
Sbjct: 684 DFTDS 688