DK947142
Clone id YMU02A01NGRL0014_P02
Library
Length 463
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_P02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
CAGTGGTATCAACGCAGAGTCGCCATTACGGCCGGGGCAGTGGTATCAACGCAGAGTGGC
CATTACGGCCGGGGCCCATGACTGTTGAGACCTTTTCAGAGTATCCTCCACTTGGACGGT
TTGCTGTTCGTGATATGAGGCAGACTGTTGCCGTGGGAGTCATCAAGGCAGTGGAAAAGA
AGGATGCCTCTGGTGCCAAGGTTACTAAGGCTGCCCTGAAGAAGAAATGAACCAGACTTT
GTGATGGTAGTGGGTCTGGTAGTTTTTTGTGTGTTTTGATGCTTCGGATGATATTATCTA
GAGTGTTGCAGACATGGGTTTTGGATAGACGGTGGCGCGGTTTCGCTGTGCTTCCTCCTC
TTACCGGCCTTTTCTATTTACATGAACTTTGCCTAAGTAACTGATAATGTAGACAACTAT
GTTGTTTTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O24534
Definition sp|O24534|EF1A_VICFA Elongation factor 1-alpha OS=Vicia faba
Align length 40
Score (bit) 74.7
E-value 1.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947142|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_P02, 5'
(360 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O24534|EF1A_VICFA Elongation factor 1-alpha OS=Vicia faba PE=... 75 1e-13
sp|P25698|EF1A_SOYBN Elongation factor 1-alpha OS=Glycine max GN... 75 1e-13
sp|Q41011|EF1A_PEA Elongation factor 1-alpha OS=Pisum sativum PE... 75 1e-13
sp|O64937|EF1A_ORYSJ Elongation factor 1-alpha OS=Oryza sativa s... 75 1e-13
sp|O49169|EF1A_MANES Elongation factor 1-alpha OS=Manihot escule... 75 1e-13
sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha OS=Zea mays GN=EF... 75 1e-13
sp|P13905|EF1A_ARATH Elongation factor 1-alpha OS=Arabidopsis th... 75 1e-13
sp|P43643|EF1A_TOBAC Elongation factor 1-alpha OS=Nicotiana taba... 74 3e-13
sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha OS=Daucus carota... 72 7e-13
sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha OS=Triticum aesti... 72 9e-13
sp|P17786|EF1A_SOLLC Elongation factor 1-alpha OS=Solanum lycope... 72 9e-13
sp|Q40034|EF1A2_HORVU Elongation factor 1-alpha OS=Hordeum vulga... 72 9e-13
sp|P34823|EF1A2_DAUCA Elongation factor 1-alpha OS=Daucus carota... 72 9e-13
sp|P34824|EF1A1_HORVU Elongation factor 1-alpha OS=Hordeum vulga... 72 9e-13
sp|O59949|EF1A_YARLI Elongation factor 1-alpha OS=Yarrowia lipol... 70 3e-12
sp|Q07051|EF1A_EIMBO Elongation factor 1-alpha (Fragment) OS=Eim... 70 3e-12
sp|P41745|EF1A_ARXAD Elongation factor 1-alpha OS=Arxula adenini... 70 3e-12
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form OS... 70 3e-12
sp|Q8LPC4|EF1A_PORYE Elongation factor 1-alpha OS=Porphyra yezoe... 70 4e-12
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form OS=... 70 4e-12
sp|A5DPE3|EF1A_PICGU Elongation factor 1-alpha OS=Pichia guillie... 69 6e-12
sp|P16017|EF1A_CANAL Elongation factor 1-alpha OS=Candida albica... 69 6e-12
sp|O42820|EF1A_SCHCO Elongation factor 1-alpha OS=Schizophyllum ... 69 7e-12
sp|Q9YIC0|EF1A_ORYLA Elongation factor 1-alpha OS=Oryzias latipe... 69 7e-12
sp|P50256|EF1AC_PORPU Elongation factor 1-alpha C OS=Porphyra pu... 69 7e-12
sp|Q5VTE0|EF1A3_HUMAN Putative elongation factor 1-alpha-like 3 ... 69 7e-12
sp|P17507|EF1A2_XENLA Elongation factor 1-alpha, oocyte form OS=... 69 7e-12
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 OS=Rattus norveg... 69 7e-12
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 OS=Oryctolagus... 69 7e-12
sp|Q5R4R8|EF1A1_PONAB Elongation factor 1-alpha 1 OS=Pongo abeli... 69 7e-12

>sp|O24534|EF1A_VICFA Elongation factor 1-alpha OS=Vicia faba PE=2
SV=1
Length = 447

Score = 74.7 bits (182), Expect = 1e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETF+EYPPLGRFAVRDMRQTVAVGVIK+VEKKD +G
Sbjct: 397 PMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436


>sp|P25698|EF1A_SOYBN Elongation factor 1-alpha OS=Glycine max
GN=TEFS1 PE=3 SV=2
Length = 447

Score = 74.7 bits (182), Expect = 1e-13
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK VEKKD +G
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436


>sp|Q41011|EF1A_PEA Elongation factor 1-alpha OS=Pisum sativum PE=2
SV=1
Length = 447

Score = 74.7 bits (182), Expect = 1e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETF+EYPPLGRFAVRDMRQTVAVGVIK+VEKKD +G
Sbjct: 397 PMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436


>sp|O64937|EF1A_ORYSJ Elongation factor 1-alpha OS=Oryza sativa
subsp. japonica GN=REFA1 PE=2 SV=2
Length = 447

Score = 74.7 bits (182), Expect = 1e-13
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK VEKKD +G
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436


>sp|O49169|EF1A_MANES Elongation factor 1-alpha OS=Manihot esculenta
GN=EF1 PE=3 SV=1
Length = 449

Score = 74.7 bits (182), Expect = 1e-13
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFS YPPLGRFAVRDMRQTVAVGVIK+VEKKD SG
Sbjct: 397 PMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 436


>sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha OS=Zea mays GN=EF1A
PE=3 SV=1
Length = 447

Score = 74.7 bits (182), Expect = 1e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKD +G
Sbjct: 397 PMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436


>sp|P13905|EF1A_ARATH Elongation factor 1-alpha OS=Arabidopsis
thaliana GN=A1 PE=1 SV=1
Length = 449

Score = 74.7 bits (182), Expect = 1e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +G
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436


>sp|P43643|EF1A_TOBAC Elongation factor 1-alpha OS=Nicotiana tabacum
PE=2 SV=1
Length = 447

Score = 73.6 bits (179), Expect = 3e-13
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK V+KKD +G
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKKDPTG 436


>sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha OS=Daucus carota
PE=3 SV=1
Length = 449

Score = 72.4 bits (176), Expect = 7e-13
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETF+EYPPLGRFAVR MRQTVAVGVIKAVEKKD +G
Sbjct: 397 PMVVETFAEYPPLGRFAVRVMRQTVAVGVIKAVEKKDPTG 436


>sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha OS=Triticum aestivum
GN=TEF1 PE=2 SV=1
Length = 447

Score = 72.0 bits (175), Expect = 9e-13
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETF+ YPPLGRFAVRDMRQTVAVGVIK VEKKD +G
Sbjct: 397 PMVVETFATYPPLGRFAVRDMRQTVAVGVIKGVEKKDPTG 436


tr_hit_id B1PID4
Definition tr|B1PID4|B1PID4_9CONI Putative elongation factor 1A (Fragment) OS=Cupressus sempervirens
Align length 104
Score (bit) 89.7
E-value 6.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947142|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_P02, 5'
(360 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1PID4|B1PID4_9CONI Putative elongation factor 1A (Fragment) ... 90 6e-17
tr|Q9LN13|Q9LN13_ARATH Elongation factor 1-alpha OS=Arabidopsis ... 86 1e-15
tr|A9SJB4|A9SJB4_PHYPA Elongation factor 1-alpha OS=Physcomitrel... 77 3e-13
tr|Q1X8N4|Q1X8N4_PRUAR Elongation factor 1 alpha (Fragment) OS=P... 77 4e-13
tr|Q14K72|Q14K72_PLAAC Translation elongation factor 1 alpha (Fr... 77 4e-13
tr|Q0VJA7|Q0VJA7_PLAAC Elongation factor 1 alpha (Fragment) OS=P... 77 4e-13
tr|P93272|P93272_MALDO Elongation factor 1 alpha (Fragment) OS=M... 77 4e-13
tr|B8LPU5|B8LPU5_PICSI Putative uncharacterized protein OS=Picea... 77 4e-13
tr|B8LMD8|B8LMD8_PICSI Putative uncharacterized protein OS=Picea... 77 4e-13
tr|B6V864|B6V864_PRUPE Elongation factor 1-alpha OS=Prunus persi... 77 4e-13
tr|A7PSZ7|A7PSZ7_VITVI Elongation factor 1-alpha OS=Vitis vinife... 77 4e-13
tr|A7M6H2|A7M6H2_MALDO Putative uncharacterized protein OS=Malus... 77 4e-13
tr|A5C4C2|A5C4C2_VITVI Elongation factor 1-alpha OS=Vitis vinife... 77 4e-13
tr|A5B1I3|A5B1I3_VITVI Putative uncharacterized protein OS=Vitis... 77 4e-13
tr|A5AFS1|A5AFS1_VITVI Elongation factor 1-alpha OS=Vitis vinife... 77 4e-13
tr|A9SA16|A9SA16_PHYPA Elongation factor 1-alpha OS=Physcomitrel... 76 7e-13
tr|A9SA12|A9SA12_PHYPA Predicted protein OS=Physcomitrella paten... 76 7e-13
tr|A9SA04|A9SA04_PHYPA Elongation factor 1-alpha OS=Physcomitrel... 76 7e-13
tr|A9RGD1|A9RGD1_PHYPA Elongation factor 1-alpha OS=Physcomitrel... 76 7e-13
tr|A9RGA5|A9RGA5_PHYPA Elongation factor 1-alpha OS=Physcomitrel... 76 7e-13
tr|Q9ZRP9|Q9ZRP9_MALDO Elongation factor 1-alpha OS=Malus domest... 76 1e-12
tr|Q9XEW9|Q9XEW9_LILLO Elongation factor 1-alpha OS=Lilium longi... 76 1e-12
tr|Q9SB99|Q9SB99_CICAR Elongation factor 1-alpha (Fragment) OS=C... 76 1e-12
tr|Q9M7E2|Q9M7E2_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 76 1e-12
tr|Q9AVT7|Q9AVT7_PICAB Elongation factor 1-alpha (Fragment) OS=P... 76 1e-12
tr|Q8W0W2|Q8W0W2_ELAOL Elongation factor 1-alpha OS=Elaeis oleif... 76 1e-12
tr|Q8SAT2|Q8SAT2_9POAL Elongation factor 1-alpha OS=Saccharum hy... 76 1e-12
tr|Q8SAT1|Q8SAT1_9POAL Elongation factor 1-alpha (Fragment) OS=S... 76 1e-12
tr|Q84NI8|Q84NI8_SOLTU Elongation factor 1-alpha OS=Solanum tube... 76 1e-12
tr|Q5ME93|Q5ME93_PSEMZ Translation elongation factor-1 alpha (Fr... 76 1e-12

>tr|B1PID4|B1PID4_9CONI Putative elongation factor 1A (Fragment)
OS=Cupressus sempervirens PE=2 SV=1
Length = 138

Score = 89.7 bits (221), Expect = 6e-17
Identities = 54/104 (51%), Positives = 65/104 (62%), Gaps = 13/104 (12%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGXXXXXXXXXXXXXRLCDGS- 178
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKK+ +G L D +
Sbjct: 28 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKEPTG-AKVTKAAAKKKRSLVDCAV 86

Query: 179 -----GSGSFLCV-------LMLRMILSRVLQTWVLDRRWRGFA 274
G S+LC+ L++R ++R +QTWVLDRRW A
Sbjct: 87 EEARHGHLSWLCLSRPIAQDLLVRCSVARRMQTWVLDRRWHHIA 130


>tr|Q9LN13|Q9LN13_ARATH Elongation factor 1-alpha OS=Arabidopsis
thaliana PE=3 SV=1
Length = 967

Score = 85.5 bits (210), Expect = 1e-15
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 11/106 (10%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGXXXXXXXXXXXXXRLCDGSG 181
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +G + +
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG-----AKVTKAAVKKGESKD 451

Query: 182 SGSF----------LCVLMLRMILSRVLQTWVLDRRWRGFA-VLPP 286
S SF LC + R + WVLDRRWR + +LPP
Sbjct: 452 SVSFITIVWYLVACLCSCFVFSPSERCSRNWVLDRRWRIYTHILPP 497



Score = 74.7 bits (182), Expect = 2e-12
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +G
Sbjct: 915 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 954


>tr|A9SJB4|A9SJB4_PHYPA Elongation factor 1-alpha OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_212963 PE=3 SV=1
Length = 447

Score = 77.4 bits (189), Expect = 3e-13
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKK+ +G
Sbjct: 397 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKEPTG 436


>tr|Q1X8N4|Q1X8N4_PRUAR Elongation factor 1 alpha (Fragment)
OS=Prunus armeniaca PE=2 SV=1
Length = 85

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SG
Sbjct: 35 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 74


>tr|Q14K72|Q14K72_PLAAC Translation elongation factor 1 alpha
(Fragment) OS=Platanus acerifolia GN=ef PE=2 SV=1
Length = 236

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SG
Sbjct: 186 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 225


>tr|Q0VJA7|Q0VJA7_PLAAC Elongation factor 1 alpha (Fragment)
OS=Platanus acerifolia GN=efalpha PE=2 SV=1
Length = 199

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SG
Sbjct: 149 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 188


>tr|P93272|P93272_MALDO Elongation factor 1 alpha (Fragment)
OS=Malus domestica GN=EF-1alpha PE=2 SV=1
Length = 143

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SG
Sbjct: 93 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 132


>tr|B8LPU5|B8LPU5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 448

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKD +G
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPTG 436


>tr|B8LMD8|B8LMD8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 167

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKD +G
Sbjct: 116 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPTG 155


>tr|B6V864|B6V864_PRUPE Elongation factor 1-alpha OS=Prunus persica
GN=eEF1A PE=2 SV=1
Length = 447

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2

Query: 2 PMTVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASG 121
PM VETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SG
Sbjct: 397 PMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 436