NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947149
Clone id YMU02A01NGRL0014_P14
Library
Length 758
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_P14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCACCCGCTC
GCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAG
AAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTG
GACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTG
TACCGAGAGCACTTCCACGGCAGCGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGC
TGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCA
AGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTNAGAGGCAGGTGCAGG
TCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAG
TTGGCATGAATGCCTGGCTTCCATTTTCCACTGGCGCCCTAACAAGCTGGCTCTTATGAG
CTTTTTGTGTCCCAGCCCACTTTGCAATACCTAAATGGAAACCAACTTTCCCCGGTGGGG
GGGCTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 60
Score (bit) 100.0
E-value 2.0e-40
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947149|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_P14, 5'
         (728 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   100   2e-40
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...    94   6e-40
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...    97   1e-39
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...    92   1e-39
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...    96   2e-39
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...    99   4e-39
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...    95   4e-39
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...    99   4e-39
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...    97   8e-39
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...    91   8e-39
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...    91   8e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...    91   8e-39
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...    91   8e-39
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...    97   1e-38
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...    97   1e-38
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...    92   1e-38
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...    91   1e-38
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...    91   1e-38
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...    97   2e-38
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...    91   2e-38
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...    91   2e-38
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...    91   3e-38
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...    95   3e-38
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...    96   3e-38
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...    91   3e-38
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...    91   7e-38
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...    95   7e-38
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...    98   9e-38
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...    89   9e-38
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   101   1e-37

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  100 bits (248), Expect(2) = 2e-40
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177



 Score = 85.1 bits (209), Expect(2) = 2e-40
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 364 REHFH 378
           REH H
Sbjct: 110 REHHH 114


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score = 94.4 bits (233), Expect(2) = 6e-40
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++++ GW PCIEFD  G+V R
Sbjct: 51  TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 367 E 369
           E
Sbjct: 111 E 111



 Score = 89.4 bits (220), Expect(2) = 6e-40
 Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAXRQVQVSGFLVQK 563
           YYDGRYW MWKLPMFGC D+A+VLREI EC K Y  + +IR LGFD  RQVQ + F+V +
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQ 177

Query: 564 PSV 572
           P++
Sbjct: 178 PTL 180


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score = 96.7 bits (239), Expect(2) = 1e-39
 Identities = 39/60 (65%), Positives = 47/60 (78%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD  RQVQ+  F+  KP
Sbjct: 120 YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179



 Score = 85.9 bits (211), Expect(2) = 1e-39
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 364 REH 372
           REH
Sbjct: 112 REH 114


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score = 92.0 bits (227), Expect(2) = 1e-39
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 116 YYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175



 Score = 90.5 bits (223), Expect(2) = 1e-39
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 367 EH 372
           E+
Sbjct: 109 EY 110


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score = 95.5 bits (236), Expect(2) = 2e-39
 Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = +1

Query: 130 LWSQGHYPVRPQEPHPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDF 306
           L S    PV  +    L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQVD+
Sbjct: 20  LKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDY 79

Query: 307 MVRKGWTPCIEFDKIGSVYREH 372
           ++R GW PC+EF K+G VYRE+
Sbjct: 80  LLRNGWIPCLEFSKVGFVYREN 101



 Score = 86.7 bits (213), Expect(2) = 2e-39
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC DA  V +E+ E  K YP+AF RV+GFD  +Q Q   F+  KP
Sbjct: 107 YYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score = 99.4 bits (246), Expect(2) = 4e-39
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 127 YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186



 Score = 81.6 bits (200), Expect(2) = 4e-39
 Identities = 34/60 (56%), Positives = 46/60 (76%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNGSRV  M VW PY NKKFETLSYLP L+ EQ+ K+V+++++  W PC+EF++ G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score = 94.7 bits (234), Expect(2) = 4e-39
 Identities = 40/62 (64%), Positives = 47/62 (75%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MW+LP+FG  DAA VL+E+AEC  EYPEAFIR++GFD  RQVQ   F+   P
Sbjct: 116 YYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTP 175

Query: 567 SV 572
            V
Sbjct: 176 KV 177



 Score = 86.3 bits (212), Expect(2) = 4e-39
 Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
 Frame = +1

Query: 130 LWSQGHYPVRPQEPHPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDF 306
           L S   +PV  +     +I SNGSRV+ M VW P   KKFETLSYLPPL+ EQ+ K+V++
Sbjct: 28  LKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEY 87

Query: 307 MVRKGWTPCIEFD-KIGSVYREH 372
           ++RKGW PC+EF+ + G V+R++
Sbjct: 88  LLRKGWVPCVEFELEKGFVHRQY 110


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score = 99.4 bits (246), Expect(2) = 4e-39
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 111 YYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170



 Score = 81.6 bits (200), Expect(2) = 4e-39
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG RV  M VW P+ N KFETLSYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 367 EH 372
           ++
Sbjct: 104 KY 105


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
           2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
           PE=2 SV=2
          Length = 181

 Score = 96.7 bits (239), Expect(2) = 8e-39
 Identities = 40/60 (66%), Positives = 47/60 (78%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 116 YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175



 Score = 83.2 bits (204), Expect(2) = 8e-39
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
 Frame = +1

Query: 130 LWSQGHYPVRPQEPHPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 303
           L S   +PV  +  + +    SNG RVS M VW P   KKFETLSYLP LS  ++AK+VD
Sbjct: 27  LKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVD 86

Query: 304 FMVRKGWTPCIEFD-KIGSVYREH 372
           +++R  W PC+EF+ + G VYREH
Sbjct: 87  YLLRNKWIPCVEFELEHGFVYREH 110


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score = 90.5 bits (223), Expect(2) = 8e-39
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD  RQVQ   F+  KP
Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176

Query: 567 S 569
           +
Sbjct: 177 T 177



 Score = 89.4 bits (220), Expect(2) = 8e-39
 Identities = 41/62 (66%), Positives = 47/62 (75%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 367 EH 372
           E+
Sbjct: 110 EN 111
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 73
Score (bit) 138.0
E-value 3.0e-64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947149|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_P14, 5'
         (728 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   138   3e-64
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...    98   2e-41
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...    98   2e-40
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...    98   2e-40
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...    98   3e-40
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...    98   3e-40
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...    97   4e-40
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   101   9e-40
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...    94   7e-39
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...    96   2e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...    97   2e-38
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   101   2e-38
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   100   3e-38
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...    96   3e-38
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   100   3e-38
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   101   4e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...    94   5e-38
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   101   5e-38
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   101   5e-38
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...    92   6e-38
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   101   6e-38
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   100   6e-38

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  138 bits (347), Expect(3) = 3e-64
 Identities = 62/73 (84%), Positives = 70/73 (95%)
 Frame = +1

Query: 160 PQEPHPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIE 339
           P+  +PLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIE
Sbjct: 37  PKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIE 96

Query: 340 FDKIGSVYREHFH 378
           FD IGSVYREHFH
Sbjct: 97  FDTIGSVYREHFH 109



 Score =  117 bits (293), Expect(3) = 3e-64
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDA RQVQV+GFLV+KP
Sbjct: 113 YYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKP 172

Query: 567 S 569
           S
Sbjct: 173 S 173



 Score = 34.3 bits (77), Expect(3) = 3e-64
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAPK 166
           LSKSFSGLKA TLFAPK
Sbjct: 22  LSKSFSGLKANTLFAPK 38


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score = 98.2 bits (243), Expect(3) = 2e-41
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+ +QVQ+ GFLV +P
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARP 178

Query: 567 S 569
           +
Sbjct: 179 N 179



 Score = 87.4 bits (215), Expect(3) = 2e-41
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = +1

Query: 181 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 360
           ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 361 YREHF 375
            R +F
Sbjct: 107 SRTNF 111



 Score = 27.7 bits (60), Expect(3) = 2e-41
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKS 169
           K FSGLK+TTLFA K+
Sbjct: 27  KQFSGLKSTTLFASKA 42


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score = 98.2 bits (243), Expect(3) = 2e-40
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+ +QVQ+ GFLV +P
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARP 178

Query: 567 S 569
           +
Sbjct: 179 N 179



 Score = 87.4 bits (215), Expect(3) = 2e-40
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = +1

Query: 181 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 360
           ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 361 YREHF 375
            R +F
Sbjct: 107 SRTNF 111



 Score = 24.6 bits (52), Expect(3) = 2e-40
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKS 169
           K FSGLK+TTL A K+
Sbjct: 27  KQFSGLKSTTLSASKA 42


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score = 97.8 bits (242), Expect(3) = 2e-40
 Identities = 39/61 (63%), Positives = 50/61 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P
Sbjct: 124 YYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRP 183

Query: 567 S 569
           +
Sbjct: 184 N 184



 Score = 87.8 bits (216), Expect(3) = 2e-40
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = +1

Query: 181 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 360
           A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV
Sbjct: 52  AVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSV 111

Query: 361 YREHF 375
            R +F
Sbjct: 112 SRTNF 116



 Score = 24.3 bits (51), Expect(3) = 2e-40
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKS 169
           K+FSGLK  TLF+ K+
Sbjct: 32  KAFSGLKPATLFSSKT 47


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score = 97.8 bits (242), Expect(3) = 3e-40
 Identities = 39/61 (63%), Positives = 50/61 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P
Sbjct: 154 YYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRP 213

Query: 567 S 569
           +
Sbjct: 214 N 214



 Score = 86.7 bits (213), Expect(3) = 3e-40
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = +1

Query: 181 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 360
           ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV
Sbjct: 82  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSV 141

Query: 361 YREHF 375
            R +F
Sbjct: 142 SRTNF 146



 Score = 24.6 bits (52), Expect(3) = 3e-40
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKS 169
           K+FSGLK+ TLF+ K+
Sbjct: 62  KAFSGLKSATLFSGKT 77


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score = 97.8 bits (242), Expect(3) = 3e-40
 Identities = 40/61 (65%), Positives = 49/61 (80%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VLREI EC   YP  ++RVLGFD+ +QVQ+ GFLV +P
Sbjct: 124 YYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARP 183

Query: 567 S 569
           +
Sbjct: 184 N 184



 Score = 85.5 bits (210), Expect(3) = 3e-40
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +1

Query: 181 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 360
           ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QVD+M+++   PCIEFD +G+V
Sbjct: 52  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAV 111

Query: 361 YREHF 375
            R +F
Sbjct: 112 SRTNF 116



 Score = 25.8 bits (55), Expect(3) = 3e-40
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKS 169
           K+FSGLK+ TLF  KS
Sbjct: 32  KAFSGLKSATLFTSKS 47


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score = 97.4 bits (241), Expect(3) = 4e-40
 Identities = 39/61 (63%), Positives = 50/61 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P
Sbjct: 123 YYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVSRP 182

Query: 567 S 569
           +
Sbjct: 183 N 183



 Score = 85.5 bits (210), Expect(3) = 4e-40
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +1

Query: 181 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 360
           ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQVD+M+++   PCIEFD +GSV
Sbjct: 51  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSV 110

Query: 361 YREHF 375
            R +F
Sbjct: 111 SRTNF 115



 Score = 25.8 bits (55), Expect(3) = 4e-40
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPTRS 181
           K+FSGLK+ TLF+ ++ T S
Sbjct: 31  KAFSGLKSATLFSSQAQTLS 50


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  101 bits (252), Expect(2) = 9e-40
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177



 Score = 85.5 bits (210), Expect(2) = 9e-40
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 364 REHFH 378
           REH H
Sbjct: 110 REHHH 114


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score = 94.4 bits (233), Expect(2) = 7e-39
 Identities = 37/63 (58%), Positives = 52/63 (82%)
 Frame = +1

Query: 184 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 363
           +SNGS+   M  W P +NKKFETLSYLPPLS + IAK++D+M++KGW PC+EFD++G V+
Sbjct: 39  VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98

Query: 364 REH 372
           R++
Sbjct: 99  RKN 101



 Score = 89.7 bits (221), Expect(2) = 7e-39
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW +WKLPMFGC DA+ VL EI EC K YP A+IR L FD   Q Q   F++QKP
Sbjct: 107 YYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQCMAFVIQKP 166

Query: 567 S 569
           +
Sbjct: 167 T 167


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score = 95.5 bits (236), Expect(2) = 2e-38
 Identities = 39/60 (65%), Positives = 47/60 (78%)
 Frame = +3

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 566
           YYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178



 Score = 87.4 bits (215), Expect(2) = 2e-38
 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = +1

Query: 187 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VY
Sbjct: 51  SNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVY 110

Query: 364 REHFH 378
           REH H
Sbjct: 111 REHHH 115