DK947152 |
Clone id |
YMU02A01NGRL0014_P19 |
Library |
YMU02 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_P19. 5' end sequence. |
Accession |
DK947152 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL291Contig1 |
Sequence |
GACCCCAGTTCTCTGCTGCTCGATTCATCCAGTCTGCACAGGGATACATGGGTGGAGGAG CAATGATTCGTAGCATGGCACGATTGATGGGGGTCGCAGCAGCAGGGACTGCTGCAATGG CTCCATCATCTTCTCCAGCTTTCTGCCATGCTTCGACGCAAGAACATTCAGCCAACATGC CATCTGCGCTACATCTGTCTCAGAAGGAGGCTTCTTCTGGAGGTGTCCCTTCTGACATGC GATTCCTCAATGCAGATGACTTGGAATATTCTTCAGATGAGGATTGGGGCAAACTCTCTT ACAATCGCCTTGTATTTTCCACTGCTCCCTCGGAAGAGGAAGTTGAAGAGGCCACCAAAG AGCTACATGCTGCTCTTCATCTCTCCATTCCTGCCTCTAGTTCTGTGGAAAAAGAGAGCC CAACCATGCCTGTGGTGGAGAATGAGGAGAAAGAATTTGTTCCGGCCATTGTGAATCAAG AGAGGGCAACAGAGGAACAGCTTCCATCTTTGTCTGCTGGCCTGGGTCTGCTTGCTGCAG GAAGCAGCTCTGTTTATCAAGCATTTCATTTATTGCAGACTAACTCCAAAGTCCAGGATG CAGTCAAATCGCTTGCTCGTGATCCGGCAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5TGJ6 |
Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
0.32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLD3 |
Definition |
tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
207 |
Score (bit) |
49.7 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947152|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_P19, 5' (631 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 50 1e-04 tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 48 6e-04 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 47 7e-04 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.002 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.040 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 40 0.12 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 39 0.33 tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=... 37 0.97 tr|B6FZE6|B6FZE6_9CLOT Putative uncharacterized protein OS=Clost... 35 2.8 tr|Q9LRH2|Q9LRH2_RAPSA Vacuolar calcium binding protein OS=Rapha... 35 2.8 tr|Q47E23|Q47E23_DECAR Rhs element Vgr protein OS=Dechloromonas ... 35 3.7 tr|Q0SK55|Q0SK55_RHOSR Putative uncharacterized protein OS=Rhodo... 35 3.7 tr|B4DXS8|B4DXS8_HUMAN cDNA FLJ50911, moderately similar to Homo... 35 3.7 tr|Q4P1M0|Q4P1M0_USTMA Putative uncharacterized protein OS=Ustil... 35 3.7 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 35 4.8 tr|A8NSH9|A8NSH9_COPC7 Putative uncharacterized protein OS=Copri... 35 4.8 tr|B8PJ31|B8PJ31_9APHY Predicted protein OS=Postia placenta Mad-... 35 4.9 tr|A7UVD1|A7UVD1_ANOGA AGAP012236-PA (Fragment) OS=Anopheles gam... 28 5.1 tr|Q1Z792|Q1Z792_PHOPR Putative chemotaxis protein CheA OS=Photo... 34 6.3 tr|Q584C3|Q584C3_9TRYP Putative uncharacterized protein OS=Trypa... 34 6.3 tr|B4QLI9|B4QLI9_DROSI GD13015 OS=Drosophila simulans GN=GD13015... 34 6.3 tr|B4AEW4|B4AEW4_BACPU Glutamate-5-semialdehyde dehydrogenase OS... 34 8.2 tr|Q69MX4|Q69MX4_ORYSJ Os09g0407800 protein OS=Oryza sativa subs... 34 8.2 tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome... 34 8.2 tr|A3BYP5|A3BYP5_ORYSJ Putative uncharacterized protein OS=Oryza... 34 8.2 tr|A2Z147|A2Z147_ORYSI Putative uncharacterized protein OS=Oryza... 34 8.2
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 49.7 bits (117), Expect = 1e-04 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 15/207 (7%) Frame = +3
Query: 48 MGGGAMIRSMARLMGVXXXXXXXXXXXXXXXF-CHA--STQEHSANMPSALHLSQKE--- 209 MGGG M+R++ R +G C A S+ +A + ++ + +K Sbjct: 1 MGGGVMLRNVGRAIGARGVGGGPVVTSVAQQASCSACRSSSSSAAKVRASTCVCEKGRGI 60
Query: 210 ASSGGVPSDMRFLNADDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAA 374 A+ +P+ +L DD E++ DE+ + Y+ RL+F + P+++EV+E + A Sbjct: 61 ATQQTLPNQPCWL-LDDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDA 119
Query: 375 LHLSI-PASSSVEKE---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXX 542 L I P S + + S + V + + +VN ++ E Sbjct: 120 LTQGIVPVSGNFNDKTTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAG 177
Query: 543 XXXVYQAFHLLQTNSKVQDAVKSLARD 623 V +AF+LLQ+N VQ+ V SLA D Sbjct: 178 HNNVCEAFNLLQSNPAVQEMVISLASD 204
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 47.8 bits (112), Expect = 6e-04 Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 26/186 (13%) Frame = +3
Query: 144 CHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDWGKLSYN 305 C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 23 CRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY------ 76
Query: 306 RLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESPTM--PV 434 LVF T P++ EVEEAT +L AL + + SS EK+ P Sbjct: 77 -LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGAVSRDPK 135
Query: 435 VENEEKEF--VPAIVNQERATEEQL-PXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAV 605 V+ E+ + V A+ + L + +AFH Q N ++Q V Sbjct: 136 VDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNPQIQQMV 195
Query: 606 KSLARD 623 SLA D Sbjct: 196 VSLATD 201
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 47.4 bits (111), Expect = 7e-04 Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 3/162 (1%) Frame = +3
Query: 150 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 329 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 330 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 500 S EE +EAT++L A++L S P SS+ + S V F ++ RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQS---SENRAVESA 150
Query: 501 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDP 626 +P QAF L N+ Q V S+A DP Sbjct: 151 VP-------------QVALQAFAFLSENTAAQTVVASIASDP 179
>tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164415 PE=4 SV=1 Length = 352
Score = 46.2 bits (108), Expect = 0.002 Identities = 57/237 (24%), Positives = 90/237 (37%), Gaps = 43/237 (18%) Frame = +3
Query: 48 MGGGAMIRSMARLMGVXXXXXXXXXXXXXXXFCHASTQEHSANMPSALHLSQKEASSGGV 227 MGGG++ RS+AR +G +CH + +++ P + S K + GG+ Sbjct: 1 MGGGSLWRSVARAVGAAAPTVAVTTNAA---YCHCAPPPNAS--PRSRGASCKCKAVGGI 55
Query: 228 PSD--MRFLNADDLEYSSDEDW---GKLSYNRLVFSTAPSEEEVEEATKELHAALHLSI- 389 + + ++ ++ EDW G + VF + P+ EEVEEA+ +L AL L Sbjct: 56 HAHPGLSAVSYGPRQFWDGEDWEIAGDEERDHYVFGSLPTVEEVEEASSDLQNALRLGFF 115
Query: 390 ----PASSSVEK-------------------------ESPTMPVVENEEKEF-------- 458 P S ++ K E T+ V E+E Sbjct: 116 TPPPPKSEALPKPESSSSRSHPQSPRSSLGPVLVEATEMSTVTTVGEVEEEVTSNLSPLP 175
Query: 459 VPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPA 629 V +V + E L + +AF+ Q N +VQ V SLA D A Sbjct: 176 VEPLVESKECIESPLYEVATSPKHSGAPSSAMLEAFYQFQHNPQVQGMVVSLATDKA 232
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 41.6 bits (96), Expect = 0.040 Identities = 38/106 (35%), Positives = 51/106 (48%) Frame = +3
Query: 306 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 485 RLVF+ PS EE EEAT EL A+ + S VE VV+ + KEF + Sbjct: 101 RLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE-------VVKEQNKEF------NKL 146
Query: 486 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARD 623 AT+ +P V QAF LL+++++ Q V SLA D Sbjct: 147 ATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVASLASD 182
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 40.0 bits (92), Expect = 0.12 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 11/133 (8%) Frame = +3
Query: 264 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 437 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 438 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSK 590 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 591 VQDAVKSLARDPA 629 V++ V SL D A Sbjct: 206 VREMVISLVSDKA 218
>tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subsp. japonica GN=P0455A11.10 PE=4 SV=1 Length = 300
Score = 38.5 bits (88), Expect = 0.33 Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 18/210 (8%) Frame = +3
Query: 48 MGGGAMIRSMARLMGVXXXXXXXXXXXXXXXFCHASTQEHSANMPSALHLSQKEASSGGV 227 MGGG M R+ A +G+ F H + +A A + A+ GG Sbjct: 1 MGGGVM-RTAAAKVGIAGGAAAAAAAAGGGRFRHVAPAFATAASAEAAAPTLVSAAGGGG 59
Query: 228 PSDMRFLNADDLEYSSD---EDWGKLSYN---------------RLVFSTAPSEEEVEEA 353 ++ + A +++S +DW + RLVF+ PS EE EEA Sbjct: 60 GGEVPAVAASGAQWASSWEVDDWEFADWRDVAAAEPEVTAAGKPRLVFAP-PSREEAEEA 118
Query: 354 TKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXX 533 T EL A+ + + +E VV+ ++K+ + + +P Sbjct: 119 TTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKLGADAIIPAMPGH---- 161
Query: 534 XXXXXXVYQAFHLLQTNSKVQDAVKSLARD 623 V QAF LL+++ + Q V SLA D Sbjct: 162 ------VMQAFTLLKSSPEAQGVVASLASD 185
>tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=DEHA2C16500g PE=4 SV=2 Length = 309
Score = 37.0 bits (84), Expect = 0.97 Identities = 30/109 (27%), Positives = 48/109 (44%) Frame = +3
Query: 144 CHASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFST 323 C + HS PS L QK+ SS +++ Y++ +D + Y Sbjct: 168 CQVTPISHSLLSPSLLSQVQKQKSS------------ENISYTNLQDLSSIDY------Y 209
Query: 324 APSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAI 470 P+E+E E K L +LS P S K +PT P + NE ++ + +I Sbjct: 210 PPTEQEWETEHKRLW--FNLSKPLKKSFRKPTPTTP-INNENQKLIDSI 255
>tr|B6FZE6|B6FZE6_9CLOT Putative uncharacterized protein OS=Clostridium hiranonis DSM 13275 GN=CLOHIR_01250 PE=4 SV=1 Length = 386
Score = 35.4 bits (80), Expect = 2.8 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +3
Query: 180 PSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAPSEEEVEEATK 359 P ++ ++++ A GV + F AD E+ SDE++G + N SEE V+ K Sbjct: 264 PESIEIAKENAEIAGVADYIDFAVADATEFKSDEEYGFIVTNPPYGERLESEESVKLLYK 323
Query: 360 EL 365 EL Sbjct: 324 EL 325
>tr|Q9LRH2|Q9LRH2_RAPSA Vacuolar calcium binding protein OS=Raphanus sativus PE=2 SV=1 Length = 248
Score = 35.4 bits (80), Expect = 2.8 Identities = 23/55 (41%), Positives = 30/55 (54%) Frame = +3
Query: 333 EEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEE 497 EEEVEE E A+ VE+ES VVE +++E PA+V +E TEE Sbjct: 133 EEEVEETKTEETPAV---------VEEESKAEDVVEPKKEEETPAVVEEESKTEE 178
Score = 33.9 bits (76), Expect = 8.2 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 14/76 (18%) Frame = +3
Query: 312 VFSTAPSEEEVEEATKELHAALHLSIP------ASSSVEKESPTMPVVENEEKEFV---- 461 V T ++ E EE KE A + ++ A ++VE+ES T VVE +++E V Sbjct: 51 VKETEETKTETEEIKKEEEAPVEVTTKDLPVEEAPAAVEEESKTEEVVEPKKEEEVEETK 110
Query: 462 ----PAIVNQERATEE 497 PA+V +E TEE Sbjct: 111 TEETPAVVEEESKTEE 126
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