DK947170 |
Clone id |
YMU02A01NGRL0015_A17 |
Library |
YMU02 |
Length |
460 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_A17. 5' end sequence. |
Accession |
DK947170 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL945Contig1 |
Sequence |
GCAGATTCATTGCGAGGAGGTTATGCGATTTCTGCCTCCGGGATCATAGTCGGGTTCGCT AACCTGGCTTGTGGGATCTGTGTGGGCATTATTGGAAGCAGCTGTGCTCTCTCTGATGCT CAGAACTCCTCGCTTTTTGTGAAGATATTAGTGATCGAGATTTTTGGAAGTGCCCTGGGG CTTTTTGGTGTAATTGTTGGCATCATCATGTCATCTCAAATAACATGGACAACGTCCTCA TAGTGAGATAGGATCTTTGTTGCTCCCTAAGCGCATTGAGGAGGGATTTTCTTAAGGTTT TTGGTGCCCTCAAGTTCCTGCAGCAGCCGAAGCGCAAAAACGCCTGTTTTGTACAGTATT CAAATCTTTGAAGATTGAGGGGCGGCAATTGATGGTCCAAGGGCTTTTAATAAATTATCT TTATTGGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q91V37 |
Definition |
sp|Q91V37|VATO_MOUSE V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus |
Align length |
60 |
Score (bit) |
91.3 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6S9B3 |
Definition |
tr|Q6S9B3|Q6S9B3_9LILI V-ATPase subunit c'' proteolipid OS=Xerophyta viscosa |
Align length |
67 |
Score (bit) |
122.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947170|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_A17, 5' (430 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6S9B3|Q6S9B3_9LILI V-ATPase subunit c'' proteolipid OS=Xerop... 122 9e-27 tr|Q9SZY7|Q9SZY7_ARATH H+-transporting ATPase-like protein (Vacu... 121 2e-26 tr|Q9SLA2|Q9SLA2_ARATH Putative vacuolar ATP synthase proteolipi... 121 2e-26 tr|Q570H2|Q570H2_ARATH H+-transporting ATPase like protein OS=Ar... 121 2e-26 tr|Q84V02|Q84V02_CITLI Vacuolar membrane ATPase subunit c'' OS=C... 120 3e-26 tr|Q84TD2|Q84TD2_GOSBA Putative vacuolar ATP synthase (Fragment)... 120 3e-26 tr|A7P7N8|A7P7N8_VITVI Chromosome chr9 scaffold_7, whole genome ... 120 3e-26 tr|A7P5K7|A7P5K7_VITVI Chromosome chr4 scaffold_6, whole genome ... 120 3e-26 tr|A5BJF2|A5BJF2_VITVI Putative uncharacterized protein OS=Vitis... 120 3e-26 tr|Q9AX79|Q9AX79_ORYSJ cDNA clone:001-110-C12, full insert seque... 120 3e-26 tr|B4FZS8|B4FZS8_MAIZE Putative uncharacterized protein OS=Zea m... 120 3e-26 tr|A2WSH8|A2WSH8_ORYSI Putative uncharacterized protein OS=Oryza... 120 3e-26 tr|A9PD21|A9PD21_POPTR Putative uncharacterized protein OS=Popul... 120 4e-26 tr|Q84TD3|Q84TD3_GOSBA Putative vacuolar ATP synthase (Fragment)... 119 6e-26 tr|A9SZV0|A9SZV0_PHYPA Predicted protein OS=Physcomitrella paten... 118 2e-25 tr|A9STU7|A9STU7_PHYPA Predicted protein OS=Physcomitrella paten... 118 2e-25 tr|A9RY81|A9RY81_PHYPA Predicted protein OS=Physcomitrella paten... 117 2e-25 tr|A9NT77|A9NT77_PICSI Putative uncharacterized protein OS=Picea... 116 6e-25 tr|A9SMW3|A9SMW3_PHYPA Predicted protein OS=Physcomitrella paten... 115 8e-25 tr|A8J588|A8J588_CHLRE Vacuolar proton-ATPase subunit c'' proteo... 107 4e-22 tr|B3H4N3|B3H4N3_ARATH Uncharacterized protein At4g32530.2 OS=Ar... 105 1e-21 tr|B3S2K8|B3S2K8_TRIAD Putative uncharacterized protein OS=Trich... 101 2e-20 tr|Q01GG1|Q01GG1_OSTTA Vacuolar H+-exporting ATPase chain c.PPA1... 100 6e-20 tr|A4RR66|A4RR66_OSTLU F-ATPase family transporter: protons (Vac... 100 6e-20 tr|Q4RZF2|Q4RZF2_TETNG Chromosome 15 SCAF14934, whole genome sho... 96 9e-19 tr|B5X4U5|B5X4U5_SALSA Vacuolar ATP synthase 21 kDa proteolipid ... 96 1e-18 tr|Q86F90|Q86F90_SCHJA SJCHGC02846 protein OS=Schistosoma japoni... 96 1e-18 tr|A9UQG9|A9UQG9_MONBE Predicted protein OS=Monosiga brevicollis... 94 3e-18 tr|A7RQU4|A7RQU4_NEMVE Predicted protein OS=Nematostella vectens... 94 3e-18 tr|A4HIV2|A4HIV2_LEIBR V-type ATPase, C subunit, putative OS=Lei... 94 3e-18
>tr|Q6S9B3|Q6S9B3_9LILI V-ATPase subunit c'' proteolipid OS=Xerophyta viscosa GN=VHA-c''1 PE=2 SV=1 Length = 177
Score = 122 bits (306), Expect = 9e-27 Identities = 62/67 (92%), Positives = 64/67 (95%) Frame = +1
Query: 1 ADSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 180 A+SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG Sbjct: 97 AESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 156
Query: 181 LFGVIVG 201 LFGVIVG Sbjct: 157 LFGVIVG 163
>tr|Q9SZY7|Q9SZY7_ARATH H+-transporting ATPase-like protein (Vacuolar membrane ATPase subunit c'') (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=VMA16 PE=2 SV=1 Length = 180
Score = 121 bits (303), Expect = 2e-26 Identities = 61/67 (91%), Positives = 64/67 (95%) Frame = +1
Query: 1 ADSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 180 A+SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNS+LFVKILVIEIFGSALG Sbjct: 102 AESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALG 161
Query: 181 LFGVIVG 201 LFGVIVG Sbjct: 162 LFGVIVG 168
>tr|Q9SLA2|Q9SLA2_ARATH Putative vacuolar ATP synthase proteolipid subunit (At2g25610) OS=Arabidopsis thaliana GN=At2g25610 PE=2 SV=1 Length = 178
Score = 121 bits (303), Expect = 2e-26 Identities = 61/67 (91%), Positives = 64/67 (95%) Frame = +1
Query: 1 ADSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 180 A+SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNS+LFVKILVIEIFGSALG Sbjct: 100 AESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALG 159
Query: 181 LFGVIVG 201 LFGVIVG Sbjct: 160 LFGVIVG 166
>tr|Q570H2|Q570H2_ARATH H+-transporting ATPase like protein OS=Arabidopsis thaliana GN=At4g32530 PE=3 SV=1 Length = 82
Score = 121 bits (303), Expect = 2e-26 Identities = 61/67 (91%), Positives = 64/67 (95%) Frame = +1
Query: 1 ADSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 180 A+SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNS+LFVKILVIEIFGSALG Sbjct: 4 AESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALG 63
Query: 181 LFGVIVG 201 LFGVIVG Sbjct: 64 LFGVIVG 70
>tr|Q84V02|Q84V02_CITLI Vacuolar membrane ATPase subunit c'' OS=Citrus limon GN=VMA16 PE=2 SV=1 Length = 182
Score = 120 bits (302), Expect = 3e-26 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +1
Query: 4 DSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 183 +SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL Sbjct: 103 ESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 162
Query: 184 FGVIVG 201 FGVIVG Sbjct: 163 FGVIVG 168
>tr|Q84TD2|Q84TD2_GOSBA Putative vacuolar ATP synthase (Fragment) OS=Gossypium barbadense PE=3 SV=1 Length = 105
Score = 120 bits (302), Expect = 3e-26 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +1
Query: 4 DSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 183 +SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL Sbjct: 26 ESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 85
Query: 184 FGVIVG 201 FGVIVG Sbjct: 86 FGVIVG 91
>tr|A7P7N8|A7P7N8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034535001 PE=3 SV=1 Length = 177
Score = 120 bits (302), Expect = 3e-26 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +1
Query: 4 DSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 183 +SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL Sbjct: 98 ESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 157
Query: 184 FGVIVG 201 FGVIVG Sbjct: 158 FGVIVG 163
>tr|A7P5K7|A7P5K7_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032571001 PE=3 SV=1 Length = 177
Score = 120 bits (302), Expect = 3e-26 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +1
Query: 4 DSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 183 +SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL Sbjct: 98 ESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 157
Query: 184 FGVIVG 201 FGVIVG Sbjct: 158 FGVIVG 163
>tr|A5BJF2|A5BJF2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004447 PE=3 SV=1 Length = 177
Score = 120 bits (302), Expect = 3e-26 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +1
Query: 4 DSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 183 +SLR GYAI ASGIIVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL Sbjct: 98 ESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 157
Query: 184 FGVIVG 201 FGVIVG Sbjct: 158 FGVIVG 163
>tr|Q9AX79|Q9AX79_ORYSJ cDNA clone:001-110-C12, full insert sequence OS=Oryza sativa subsp. japonica GN=P0410E03.20 PE=2 SV=1 Length = 176
Score = 120 bits (301), Expect = 3e-26 Identities = 60/66 (90%), Positives = 63/66 (95%) Frame = +1
Query: 4 DSLRGGYAISASGIIVGFANLACGICVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 183 +SLR GYAI ASG+IVGFANL CG+CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL Sbjct: 98 ESLRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGL 157
Query: 184 FGVIVG 201 FGVIVG Sbjct: 158 FGVIVG 163
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