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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947257
Clone id YMU02A01NGRL0015_F04
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_F04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ACATCCCAATCGTCCATTCTCTACCATATCGGGCTGCGTCTCCTTGACACCGGGGCTTGC
CATTTTCATCCTGCTCTGCACATTTCTTCATACTCCCAAGCTCCTCTCCCAGCTGCTCTG
TAGTACTTCTCTGCATTCTATTTCGCCACCATCTTTTGCATATACGTAGATCTCCTAGCA
CTGCGTTTGATTTGCTTCTTTTCAATACAGCTATGGGCTTTCGGATTGTGCCCGCGCTGC
TTGTAGCTTTTGCTTGCATCCATTACGTAGCGCTCGCTTCTATCGACGATAACCTCGCTG
CCAGCGCCAAGAAATACAAATCCTGCAAGAAGAGGGCTGCCACTCTCTGCGGGCCTAGCT
CCTTCACCTTCTACCTGCACAACACCGTCTACAACCCCGCCGTCGACAACGCCAATAACT
TCACCTCTGTGTATGGCGTGCAACCTAATGTGACGTGGACCAATACCTACGCCTTCGGCA
CCACCTCCACATTCGAGGACCCGCTCACAAGCGGGCCCGCCACCGACTCGCAGCAGATAG
GCGTAGCTCACGGCTTCTGGCAGCTCAACAGCAAGGTAGGCTACACTCTCTTCCACATCT
TCACCGCCAACATTACC
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 86
Score (bit) 45.1
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947257|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F04, 5'
         (617 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    45   3e-04
sp|O24006|AMP_IMPBA Antimicrobial peptides OS=Impatiens balsamin...    34   0.53 
sp|Q8WUA2|PPIL4_HUMAN Peptidyl-prolyl cis-trans isomerase-like 4...    31   4.5  
sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE...    30   7.6  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +3

Query: 360 SFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 527
           +  FY H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVFYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 528 SQQIGVAHGFWQLNSKVGYTLFHIFT 605
           S+Q+G A GF+  ++K  YT +  FT
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFT 116


>sp|O24006|AMP_IMPBA Antimicrobial peptides OS=Impatiens balsamina
           GN=AMP PE=1 SV=1
          Length = 333

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -2

Query: 166 RICKRWWRNRMQRSTTEQLGEELGSMKKCAEQDENGKPRC-QGDAARYGREW 14
           R CKRW  N  + +T +   EE    +    +D+ G+  C  G   RY R W
Sbjct: 246 RYCKRWCHNAAEEATLKAFEEEAAREQPVYSEDQWGRRCCGWGPGRRYCRRW 297


>sp|Q8WUA2|PPIL4_HUMAN Peptidyl-prolyl cis-trans isomerase-like 4
           OS=Homo sapiens GN=PPIL4 PE=1 SV=1
          Length = 492

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = -1

Query: 257 ASKSYKQRGHNPKAHSCIEKKQIKRSARRSTYMQKMVAK*NAEKYYRAAGRGAWEYEEMC 78
           +S S+  + H  K H C E+K+ +           M  K   +  YR  G G +E EE C
Sbjct: 376 SSHSHTSKKHKKKTHHCSEEKEDE---------DYMPIKNTNQDIYREMGFGHYEEEESC 426

Query: 77  RAG*KWQAPVSRRR 36
                W+   S +R
Sbjct: 427 -----WEKQKSEKR 435


>sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE=1
           SV=4
          Length = 590

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 408 NANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTS 512
           NAN F  +  V+P    +N ++F  +STFEDP T+
Sbjct: 539 NANYFLDITSVKPEEIESNLFSF--SSTFEDPSTA 571
tr_hit_id Q9SYU1
Definition tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativum
Align length 86
Score (bit) 42.7
E-value 0.017
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947257|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F04, 5'
         (617 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativ...    43   0.017
tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_...    43   0.017
tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea enge...    42   0.022
tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata GN...    42   0.038
tr|A7NXR4|A7NXR4_VITVI Chromosome chr5 scaffold_2, whole genome ...    40   0.084
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    40   0.11 
tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family prot...    40   0.14 
tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome ...    40   0.14 
tr|A7NXR5|A7NXR5_VITVI Chromosome chr5 scaffold_2, whole genome ...    40   0.14 
tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragmen...    40   0.14 
tr|Q9T017|Q9T017_ARATH Putative disease resistance response prot...    39   0.19 
tr|Q27JA5|Q27JA5_PICGL Dirigent-like protein pDIR7 OS=Picea glau...    39   0.19 
tr|Q943Q0|Q943Q0_ORYSJ Putative uncharacterized protein P0011G08...    39   0.24 
tr|A2ZPF2|A2ZPF2_ORYSJ Putative uncharacterized protein OS=Oryza...    39   0.24 
tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata GN...    39   0.32 
tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata GN...    39   0.32 
tr|A9PBN6|A9PBN6_POPTR Putative uncharacterized protein OS=Popul...    39   0.32 
tr|A6YQZ8|A6YQZ8_PICSI Dirigent-like protein (Putative uncharact...    39   0.32 
tr|Q9FIG7|Q9FIG7_ARATH Disease resistance response protein-like ...    38   0.42 
tr|Q53NP9|Q53NP9_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    38   0.42 
tr|Q27J96|Q27J96_PICSI Dirigent protein pDIR16 OS=Picea sitchens...    38   0.42 
tr|Q0IU79|Q0IU79_ORYSJ Os11g0179700 protein OS=Oryza sativa subs...    38   0.42 
tr|A7PW09|A7PW09_VITVI Chromosome chr8 scaffold_34, whole genome...    38   0.42 
tr|A2ZC34|A2ZC34_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.42 
tr|Q9SDR3|Q9SDR3_THUPL Dirigent-like protein OS=Thuja plicata GN...    38   0.54 
tr|Q9SDR2|Q9SDR2_THUPL Dirigent-like protein OS=Thuja plicata GN...    38   0.54 
tr|Q9LIQ5|Q9LIQ5_ARATH Similarity to disease resistance response...    38   0.54 
tr|Q7Y225|Q7Y225_ARATH At3g24020 (Putative uncharacterized prote...    38   0.54 
tr|A7P029|A7P029_VITVI Chromosome chr6 scaffold_3, whole genome ...    38   0.54 
tr|A5BN87|A5BN87_VITVI Putative uncharacterized protein (Fragmen...    37   0.71 

>tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativum
           GN=DRR206-c PE=4 SV=1
          Length = 184

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = +3

Query: 360 SFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 527
           +   Y H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVLYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 528 SQQIGVAHGFWQLNSKVGYTLFHIFT 605
           S+Q+G A GF+  ++K  YT +  FT
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFT 116


>tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_Tp7
           PE=2 SV=1
          Length = 192

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +3

Query: 360 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 527
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  S F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLSVFDDPITVDNNLH 98

Query: 528 SQQIGVAHGFWQLNSKVGYTLFHIFT 605
           S  +G A GF+  + K  ++ +  FT
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFT 124


>tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea
           engelmannii x Picea glauca PE=2 SV=1
          Length = 188

 Score = 42.4 bits (98), Expect = 0.022
 Identities = 35/129 (27%), Positives = 53/129 (41%)
 Frame = +3

Query: 225 IVPALLVAFACIHYVALASIDDNLXXXXXXXXXXXXXXXTLCGPSSFTFYLHNTVYNPAV 404
           IVPALL+   C  ++A A  +  +                    S   FY H+ V     
Sbjct: 12  IVPALLLLSLCCLHIAEAEAEAKVKLGREKI-------------SHLHFYFHDLV----- 53

Query: 405 DNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIGVAHGFWQLNSKVGY 584
            +  N T+V       T ++   FGT    +D LT GPA  S+ +G A G +  +S+   
Sbjct: 54  -SGKNVTAVKVASAPTTNSSATLFGTVMVMDDWLTEGPAATSKMVGRAQGIYVSSSQ--- 109

Query: 585 TLFHIFTAN 611
             FH+  A+
Sbjct: 110 EKFHLLMAS 118


>tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp8 PE=2 SV=1
          Length = 192

 Score = 41.6 bits (96), Expect = 0.038
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +3

Query: 360 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 527
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  + F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLAVFDDPITVDNNLH 98

Query: 528 SQQIGVAHGFWQLNSKVGYTLFHIFT 605
           S  +G A GF+  + K  ++ +  FT
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFT 124


>tr|A7NXR4|A7NXR4_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020440001
           PE=4 SV=1
          Length = 249

 Score = 40.4 bits (93), Expect = 0.084
 Identities = 22/47 (46%), Positives = 27/47 (57%)
 Frame = +3

Query: 474 FGTTSTFEDPLTSGPATDSQQIGVAHGFWQLNSKVGYTLFHIFTANI 614
           FGT +  +D LTSGP   SQQ+G A G +  +S  G T    FTA I
Sbjct: 135 FGTITVIDDVLTSGPDLGSQQMGKAQGVYVASSVDGTTQMMTFTAMI 181


>tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp1 PE=2 SV=1
          Length = 189

 Score = 40.0 bits (92), Expect = 0.11
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = +3

Query: 360 SFTFYLHNTVYNPAVDNANNFTSVYGVQPN----VTWTNTYAFGTTSTFEDPLTSGPATD 527
           +   Y H+ +YN    N +N T+     P      T+   + FG    F+DP+T      
Sbjct: 38  NLVLYFHDILYNGK--NIHNATAALVAAPAWGNLTTFAEPFKFGDVVVFDDPITLDNNLH 95

Query: 528 SQQIGVAHGFWQLNSKVGYTLFHIFT 605
           S  +G A GF+  N K  Y  +  FT
Sbjct: 96  SPPVGRAQGFYLYNMKTTYNAWLGFT 121


>tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein
           OS=Capsella rubella GN=6J23.5 PE=4 SV=1
          Length = 187

 Score = 39.7 bits (91), Expect = 0.14
 Identities = 24/81 (29%), Positives = 39/81 (48%)
 Frame = +3

Query: 363 FTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 542
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+DP+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDDPITMDKNYLSEPVA 98

Query: 543 VAHGFWQLNSKVGYTLFHIFT 605
            A GF+  + K+ +  +  +T
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYT 119


>tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024748001
           PE=4 SV=1
          Length = 194

 Score = 39.7 bits (91), Expect = 0.14
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +3

Query: 357 SSFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQ 536
           S F FY H+ V  P      N +S+  V P     +T AFG  +  ++PLT GP   S+ 
Sbjct: 51  SHFRFYWHDIVSGP------NPSSIQVVSPPTN--STTAFGLINMIDNPLTVGPKLSSKM 102

Query: 537 IGVAHGFW 560
           +G A G +
Sbjct: 103 VGKAQGLY 110


>tr|A7NXR5|A7NXR5_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020441001
           PE=4 SV=1
          Length = 249

 Score = 39.7 bits (91), Expect = 0.14
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = +3

Query: 474 FGTTSTFEDPLTSGPATDSQQIGVAHGFWQLNSKVGYTLFHIFTA 608
           FGT +  +D LTSGP   SQ IG A G +  +S  G T    FTA
Sbjct: 135 FGTITVIDDVLTSGPELGSQSIGKAQGVYVASSADGTTQMMAFTA 179


>tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragment)
           OS=Vitis vinifera GN=VITISV_009709 PE=4 SV=1
          Length = 168

 Score = 39.7 bits (91), Expect = 0.14
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +3

Query: 357 SSFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQ 536
           S F FY H+ V  P      N +S+  V P     +T AFG  +  ++PLT GP   S+ 
Sbjct: 51  SHFRFYWHDIVSGP------NPSSIQVVSPPTN--STTAFGLINMIDNPLTVGPKLSSKM 102

Query: 537 IGVAHGFW 560
           +G A G +
Sbjct: 103 VGKAQGLY 110