DK947270
Clone id YMU02A01NGRL0015_F21
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_F21. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGCTTTTTCATGCGTTGTTCTGCTCGTTTAATGCCGCAGGCGGGCTTCTCAAGGTCGTT
GAAGGCGATCGTGCAGGCTGAGGTTATGAGCACTGATTGTGTTGCTCTTCGTGGTTCAGT
ACACGTGCTGAATGGAGCACGAGACATGTAATTTCCATGTACTTATTGTAGCCTATATGA
CAGGCCAGAAAGGGCAGAAAAATGCTTTGTAATAGGTTCTTGTTTCGGGTAGTTATCATT
ATATTGTGTCATGGCAGCAAGTATGAGGATTTGTTTTGATGTATGAGCTTTTGAGCTACA
TTATCTAGTGGAAGATTCTTTGTCTGTCCTGCTTTGTACAAGCTTTTGAGCTACATTATC
TAGTGGAAGATTCTCTCTCTGTTTTGTCAAANAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6IR37
Definition sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=Mus musculus
Align length 26
Score (bit) 32.3
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947270|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F21, 5'
(388 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=M... 32 0.76
sp|A4VGD9|TATB_PSEU5 Sec-independent protein translocase protein... 31 1.7
sp|Q6T4R5|NHS_HUMAN Nance-Horan syndrome protein OS=Homo sapiens... 29 6.5

>sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=Mus
musculus GN=Zdhhc24 PE=2 SV=2
Length = 284

Score = 32.3 bits (72), Expect = 0.76
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3

Query: 188 LACHIGYNKYMEITCLVLHSARVLNH 111
L C +G++ Y CL+LHSA VL H
Sbjct: 127 LGCCVGFHNYRPFLCLLLHSAGVLLH 152


>sp|A4VGD9|TATB_PSEU5 Sec-independent protein translocase protein
tatB homolog OS=Pseudomonas stutzeri (strain A1501)
GN=tatB PE=3 SV=1
Length = 139

Score = 31.2 bits (69), Expect = 1.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3

Query: 137 LHSARVLNHEEQHNQCS*PQPARSPSTTLRSPPA 36
LH+ R+L+ E + Q P PA +P+ T SPP+
Sbjct: 63 LHNERILDLEREMKQSIMPPPASNPAATPPSPPS 96


>sp|Q6T4R5|NHS_HUMAN Nance-Horan syndrome protein OS=Homo sapiens
GN=NHS PE=1 SV=1
Length = 1630

Score = 29.3 bits (64), Expect = 6.5
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = -3

Query: 329 GQTKNLPLDNVAQKLIHQNKSSYLLP*HNIMITTRNK-----NLLQSIFLPFLACHIGYN 165
GQ P+ N+ L Q S LP + T K ++ S +P +G++
Sbjct: 298 GQRPKNPIHNIPSTLDKQTNWSKALP----LPTPEEKMKQDAQVISSCIIPINVTGVGFD 353

Query: 164 KYMEITCLVLHSARVLNHEEQ 102
+ I C ++HS VL +
Sbjct: 354 REASIRCSLVHSQSVLQRRRK 374


tr_hit_id B8P5Z3
Definition tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta Mad-698-R
Align length 67
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947270|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F21, 5'
(388 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta Mad-... 33 5.5

>tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_95687 PE=4 SV=1
Length = 785

Score = 33.5 bits (75), Expect = 5.5
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = -2

Query: 213 ITKHFSALSGLSYRLQ*VHGNYMSRAPFSTCTEPRRATQSVLITSACTIAFNDLEKPACG 34
I++H S L + Q ++ Y++R+P ST EP TQSV +++FN A G
Sbjct: 383 ISQHVSTLRQRDQQQQALYQQYLNRSP-STPPEPSYGTQSVAAVLGGSMSFNSSMNSASG 441

Query: 33 IKRAEQR 13
+ R
Sbjct: 442 LNVGSSR 448