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NBDC - LSDB Archive
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DK947272
Clone id YMU02A01NGRL0015_F23
Library
Length 775
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_F23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCA
TCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGT
CAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGC
TCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACA
AGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGG
TGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCG
TGTACCGAGAGCACTTCCACGGCAGCGGCCACTACGATGGGCGGTACTGGGTGATGTGGA
AGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCG
CCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTNAGAGGCAGGTGC
AGGTCTCCGGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAAT
TTAGGTGGGCATGAATGCCTGCTTCCCCATTTCCCACTGGGCGGCTAACCAAGCCTTGCC
TCTTATGAGCCTTTTTGTGTTCCCCAGCACCTTTTGGCAGAACTTTAATGGAAACCAACC
TTTCCCCAGGTTGGGGGGGCCTTTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 164
Score (bit) 177.0
E-value 4.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947272|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F23, 5'
         (747 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   177   4e-44
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   173   8e-43
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   173   1e-42
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   172   2e-42
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   172   2e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   171   3e-42
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   171   3e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   171   4e-42
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   171   5e-42
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   171   5e-42
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   170   7e-42
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   170   9e-42
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   170   9e-42
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   169   1e-41
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   169   1e-41
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   169   1e-41
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   169   1e-41
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   168   3e-41
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   168   3e-41
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   168   3e-41
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   168   3e-41
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   167   4e-41
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   167   6e-41
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   167   6e-41
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   167   6e-41
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   167   7e-41
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   167   7e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  177 bits (450), Expect = 4e-44
 Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 5/164 (3%)
 Frame = +3

Query: 117 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 284
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 285 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVL 461
            ++K++D+++R  W PC+EF+ + G VYREH H  G+YDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 462 REIAECAKEYPEAFIRVLGFDAXRQVQVSGLPCPEALCLNFLKA 593
           +E+ EC KEYP AFIRV+GFD  RQVQ          C++F+ A
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQ----------CISFIVA 175


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  173 bits (439), Expect = 8e-43
 Identities = 82/154 (53%), Positives = 104/154 (67%)
 Frame = +3

Query: 126 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 305
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 306 FMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 485
           +++R GW PCIEF K+G VYRE+ +  G+YDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 486 EYPEAFIRVLGFDAXRQVQVSGLPCPEALCLNFL 587
            YP+ F R++GFD  RQVQ          C++FL
Sbjct: 148 AYPDYFNRIIGFDNTRQVQ----------CISFL 171


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  173 bits (438), Expect = 1e-42
 Identities = 84/144 (58%), Positives = 105/144 (72%), Gaps = 5/144 (3%)
 Frame = +3

Query: 129 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 296
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 297 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           +VD+++RK   PC+EF+ + G VYREH    G+YDGRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQV 545
           EC K YP AFIR++GFD  RQVQ+
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQI 171


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  172 bits (437), Expect = 1e-42
 Identities = 82/146 (56%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
 Frame = +3

Query: 117 LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 287
           L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 288 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLR 464
           + K+V++++RKGW PC+EF+ + G V+R++    G+YDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 465 EIAECAKEYPEAFIRVLGFDAXRQVQ 542
           E+AEC  EYPEAFIR++GFD  RQVQ
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQ 166


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  172 bits (436), Expect = 2e-42
 Identities = 81/142 (57%), Positives = 104/142 (73%), Gaps = 4/142 (2%)
 Frame = +3

Query: 129 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 299
           F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 300 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAE 476
           VD+++RK W PC+EF+ + G VYRE+    G+YDGRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 477 CAKEYPEAFIRVLGFDAXRQVQ 542
           C KEYP+A+IR++GFD  RQVQ
Sbjct: 145 CKKEYPQAWIRIIGFDNVRQVQ 166


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  172 bits (435), Expect = 2e-42
 Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 5/143 (3%)
 Frame = +3

Query: 129 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 296
           F+GLK++  F    K+ N +    SNG RV+ M VW P   KKFETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 297 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           +VD+++R  W PC+EF+ + G VYREH +  G+YDGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQ 542
           EC KEYP AFIR++GFD  RQVQ
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQ 166


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  171 bits (434), Expect = 3e-42
 Identities = 82/142 (57%), Positives = 106/142 (74%), Gaps = 4/142 (2%)
 Frame = +3

Query: 129 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 299
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 300 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAE 476
           VD+++RK W PC+EF+ + G VYRE+    G+YDGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 477 CAKEYPEAFIRVLGFDAXRQVQ 542
             K YP++FIR++GFD  RQVQ
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQ 171


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  171 bits (434), Expect = 3e-42
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 5/144 (3%)
 Frame = +3

Query: 126 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 293
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 294 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREI 470
           K+++++++KGW PC+EF+ + G VYREH    G+YDGRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 471 AECAKEYPEAFIRVLGFDAXRQVQ 542
            E  K YP+A+IR++GFD  RQVQ
Sbjct: 145 QEAKKAYPQAWIRIIGFDNVRQVQ 168


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  171 bits (434), Expect = 3e-42
 Identities = 82/142 (57%), Positives = 101/142 (71%), Gaps = 4/142 (2%)
 Frame = +3

Query: 129 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 296
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 297 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAE 476
           +VD+++R  W PCIEF K G VYRE+    G+YDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 477 CAKEYPEAFIRVLGFDAXRQVQ 542
             K YPE F+R++GFD  RQVQ
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQ 167


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  171 bits (434), Expect = 3e-42
 Identities = 82/142 (57%), Positives = 101/142 (71%), Gaps = 4/142 (2%)
 Frame = +3

Query: 129 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 296
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 297 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAE 476
           +VD+++R  W PCIEF K G VYRE+    G+YDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 477 CAKEYPEAFIRVLGFDAXRQVQ 542
             K YPE F+R++GFD  RQVQ
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQ 167
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 145
Score (bit) 273.0
E-value 1.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947272|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F23, 5'
         (747 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   273   1e-71
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   191   6e-47
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   187   5e-46
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   187   8e-46
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   186   1e-45
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   186   1e-45
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   184   7e-45
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   180   8e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   180   1e-43
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   180   1e-43
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   179   2e-43
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   177   7e-43
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   177   7e-43
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   177   9e-43
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   175   3e-42
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   175   3e-42
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   174   6e-42
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   174   6e-42
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   173   9e-42
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   172   3e-41
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   172   3e-41
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   171   4e-41

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  273 bits (697), Expect = 1e-71
 Identities = 126/145 (86%), Positives = 137/145 (94%)
 Frame = +3

Query: 117 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 296
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 297 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAE 476
           QV++MVRKGWTPCIEFD IGSVYREHFHGSG+YDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 477 CAKEYPEAFIRVLGFDAXRQVQVSG 551
           CAKEYP AFIRVLGFDA RQVQV+G
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAG 166


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  191 bits (484), Expect = 6e-47
 Identities = 89/146 (60%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           DFM+++   PCIEFD +GSV R +F G   SG+YDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQVSG 551
           EC + +P  ++RVLGFD+ +QVQ+ G
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICG 172


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  187 bits (476), Expect = 5e-46
 Identities = 88/146 (60%), Positives = 108/146 (73%), Gaps = 3/146 (2%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           DFM+++   PCIEFD +GSV R +F G   SG+YDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQVSG 551
           EC + +P  ++RVLGFD+ +QVQ+ G
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICG 172


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  187 bits (474), Expect = 8e-46
 Identities = 86/146 (58%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           D+M+++   PCIEFD +G+V R +F G   SG+YDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQVSG 551
           EC   YP  ++RVLGFD+ +QVQ+ G
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICG 177


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  186 bits (473), Expect = 1e-45
 Identities = 85/146 (58%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           D+M+++   PCIEFD +GSV R +F G   SG+YDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQVSG 551
           EC  ++P  ++RVLGFD+ +QVQ+ G
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICG 207


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  186 bits (473), Expect = 1e-45
 Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 3/146 (2%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           D+M+++   PCIEFD +GSV R +F G   SG+YDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQVSG 551
           EC  ++P  ++RVLGFD+ +QVQ+ G
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICG 177


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  184 bits (466), Expect = 7e-45
 Identities = 83/146 (56%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGHYDGRYWVMWKLPMFGCQDAAAVLREIA 473
           D+M+++   PCIEFD +GSV R +F G   SG+YDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 474 ECAKEYPEAFIRVLGFDAXRQVQVSG 551
           EC  ++P  ++RVLGFD+ +QVQ+ G
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICG 176


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  180 bits (457), Expect = 8e-44
 Identities = 82/143 (57%), Positives = 103/143 (72%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAECA 482
           ++M+++   PC+EFD    V R +    G+YDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 483 KEYPEAFIRVLGFDAXRQVQVSG 551
           K +P  F+RVLGFD  +QVQ+ G
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICG 174


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/143 (58%), Positives = 103/143 (72%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAECA 482
           D+M+++   PC+EFD    V R +    G+YDGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 483 KEYPEAFIRVLGFDAXRQVQVSG 551
           K +P  F+RVLGFD  +QVQ+ G
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICG 174


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/143 (58%), Positives = 104/143 (72%)
 Frame = +3

Query: 123 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 302
           K+FSGLK+ TLF+ +S    ++ NGSRV+ M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 303 DFMVRKGWTPCIEFDKIGSVYREHFHGSGHYDGRYWVMWKLPMFGCQDAAAVLREIAECA 482
           ++M+++   PC+EFD    V RE+    G+YDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 483 KEYPEAFIRVLGFDAXRQVQVSG 551
           K +P  F+RVLGFD  +QVQ+ G
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICG 174