BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947286|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_G20, 5'
         (324 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P75242|RUVB_MYCPN Holliday junction ATP-dependent DNA helicas...    32   0.74 

>sp|P75242|RUVB_MYCPN Holliday junction ATP-dependent DNA helicase
           ruvB OS=Mycoplasma pneumoniae GN=ruvB PE=3 SV=1
          Length = 307

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
 Frame = -3

Query: 214 KVNRSNQAQSDLLHRIGYRGTGRITFNMAAT*HRATMSTKLSQLCQGNH----------T 65
           K +R N+AQ D +   G  G G+ T         + M+TKL Q+ QG H           
Sbjct: 29  KASRINKAQLDHILLYGPPGVGKTTLARLIA---SEMNTKL-QIIQGGHLQRPSDFLNAV 84

Query: 64  AITKLYTVLFLVEIHKPCPTI 2
           ++ K   VLF+ EIH   P++
Sbjct: 85  SLIKKGDVLFVDEIHAVAPSV 105

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947286|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_G20, 5'
         (324 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******