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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947288
Clone id YMU02A01NGRL0015_G22
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_G22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTGACCTGCGAGATGTATGTCAGCAAGCTGAACGGCGATGGGCATCAAAGGCAATTAGGA
ATAACGCAAGCAGTCCTATGGCATGTGGTCTACCTCCACTGGAGGAGTATATAGAGAGTG
CACAGAAAAGGAGAACTACCATTCAAGTAATGCCATCTGAGCGAGGTCATCGTGCAAGGC
CCGGGGCAGCATGGCCACCATCTGTGGTAGTTTGAAGGGTCTGTCCACCTGTGTTCTTCT
TGTCATGATATTATATACCTACTATATAGTGGCCATATCATATCATAACAGATTTGAGTC
AGTATAATGAGTGAATCATGTGTTACTAGAGGACATGAAGTGAAGAGAGCGCTGTAGATA
GTGACATCAGTTAGAAGTGGGCATAGAGCGTGTCCATAATTACTGCCCTATCCTGCATAA
AGATAAACGGGGACTGTAAGATAGCTTTGTCCATGCTTTGTAAAACAGTTAATAACAAAA
AAACATTTTCTTTATAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A8MXZ3
Definition sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like 3 OS=Homo sapiens
Align length 55
Score (bit) 30.4
E-value 4.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947288|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_G22, 5'
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li...    30   4.6  
sp|P23269|O1496_RAT Olfactory receptor 1496 OS=Rattus norvegicus...    30   6.0  
sp|Q8BI69|ZN784_MOUSE Zinc finger protein 784 OS=Mus musculus GN...    30   7.9  
sp|Q9VIQ9|SICK_DROME Protein sickie OS=Drosophila melanogaster G...    30   7.9  
sp|P21415|ENV_GALV Envelope glycoprotein OS=Gibbon ape leukemia ...    30   7.9  

>sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like
           3 OS=Homo sapiens PE=3 SV=1
          Length = 250

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 194 PCCPGPCTMTSLRWHYLNGSSPFL-CTLYILLQWR*TTCHRTACVIPNCL*CPSP 33
           PCC   C  +S      N SS  L C      Q   TTC+RT C  P+C  C SP
Sbjct: 189 PCCQPTCGGSSCCSQTCNESSYCLPCCRPTCCQ---TTCYRTTCCRPSC--CCSP 238


>sp|P23269|O1496_RAT Olfactory receptor 1496 OS=Rattus norvegicus
           GN=Olr1496 PE=2 SV=1
          Length = 310

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 152 HYLNGSSPFLCTLYILLQWR*TTCH 78
           HY +  SP LCT  +LL W  TT H
Sbjct: 129 HYTSIMSPKLCTCLVLLLWMLTTSH 153


>sp|Q8BI69|ZN784_MOUSE Zinc finger protein 784 OS=Mus musculus
           GN=Znf784 PE=2 SV=1
          Length = 297

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 221 DPSNYHRWWPCCPGPCTMTSLRWHYL--NGSSPFLCTL 114
           DPS  H     CPGP    SLR HY    G  P+ C+L
Sbjct: 98  DPSRCHVCGHSCPGP---ASLRAHYSLHTGERPYRCSL 132


>sp|Q9VIQ9|SICK_DROME Protein sickie OS=Drosophila melanogaster
            GN=sick PE=1 SV=3
          Length = 2197

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
 Frame = -2

Query: 371  TDVTIYSALFTSCPLVTHDSLIILTQICYDMIWPLY-SRYIIS*QEE---------HRWT 222
            +DVTI   LF +CP+   DS     Q+ +  IW  + S Y++    E           W 
Sbjct: 2058 SDVTIGPRLFLACPMDLKDS-----QVWFTDIWNYHLSPYLVEAVREGVQLYGRRGGAWN 2112

Query: 221  DPSNYHR-WWPCCPGPCTMTSLR 156
            DPS + R  +P   GP ++  LR
Sbjct: 2113 DPSAFIRNSYPWPYGPDSVPPLR 2135


>sp|P21415|ENV_GALV Envelope glycoprotein OS=Gibbon ape leukemia
           virus GN=env PE=2 SV=2
          Length = 685

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 236 EHRWTDPSNYHRWWPCCPG--PCTMTSL 159
           +H++  PSN H WW C  G  PC  TS+
Sbjct: 425 DHQYLLPSN-HSWWACSTGLTPCLSTSV 451
tr_hit_id A8J6P5
Definition tr|A8J6P5|A8J6P5_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
Align length 64
Score (bit) 56.2
E-value 8.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947288|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_G22, 5'
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8J6P5|A8J6P5_CHLRE Predicted protein OS=Chlamydomonas reinha...    56   8e-07
tr|A7R0N7|A7R0N7_VITVI Chromosome chr10 scaffold_312, whole geno...    52   1e-05
tr|Q6Z7T4|Q6Z7T4_ORYSJ Os02g0740300 protein OS=Oryza sativa subs...    52   2e-05
tr|B8AIG7|B8AIG7_ORYSI Putative uncharacterized protein OS=Oryza...    52   2e-05
tr|B4FJK5|B4FJK5_MAIZE Putative uncharacterized protein OS=Zea m...    51   3e-05
tr|O81459|O81459_ARATH T27D20.13 protein (Putative vesicle trans...    47   4e-04
tr|A0C7Q6|A0C7Q6_PARTE Chromosome undetermined scaffold_156, who...    37   0.66 
tr|A3AB72|A3AB72_ORYSJ Putative uncharacterized protein OS=Oryza...    35   1.9  
tr|Q64911|Q64911_9ALPH Glycoprotein G (Fragment) OS=Equid herpes...    33   5.6  
tr|B4MW79|B4MW79_DROWI GK14929 OS=Drosophila willistoni GN=GK149...    33   9.5  
tr|B6H3B0|B6H3B0_PENCH Pc13g13160 protein OS=Penicillium chrysog...    33   9.5  

>tr|A8J6P5|A8J6P5_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_176020 PE=3 SV=1
          Length = 534

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIRNNASSPMACGLPPLEEYIESAQKRRTTIQV-MPSERGHRAR 179
           DLRDVC+  ERRWASK IR          LPPL EY+ SA +R + +Q  + S    RA+
Sbjct: 455 DLRDVCEHTERRWASKIIRGEVREE---ELPPLREYLASAAERASAVQASLSSSHPARAK 511

Query: 180 PGAA 191
            GAA
Sbjct: 512 EGAA 515


>tr|A7R0N7|A7R0N7_VITVI Chromosome chr10 scaffold_312, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00011515001
           PE=3 SV=1
          Length = 470

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIRNNA-SSPMACGLPPLEEYIESAQKRRTTI 143
           D+RD+CQQAER WASK IR  A        LPP++ YIESA+ R  T+
Sbjct: 400 DIRDICQQAERHWASKVIRGQAPKDGDQVILPPIQVYIESAKTRANTL 447


>tr|Q6Z7T4|Q6Z7T4_ORYSJ Os02g0740300 protein OS=Oryza sativa subsp.
           japonica GN=P0516G10.11 PE=2 SV=1
          Length = 611

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIR-----NNASSPMACGLPPLEEYIESAQKRRTTI 143
           D+RD+CQQAER WASK IR     N+   P    LPP+EEY+  +++RR ++
Sbjct: 547 DIRDICQQAERHWASKLIRGQVPKNDKGEP---SLPPVEEYVACSEQRRRSL 595


>tr|B8AIG7|B8AIG7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08877 PE=4 SV=1
          Length = 612

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIR-----NNASSPMACGLPPLEEYIESAQKRRTTI 143
           D+RD+CQQAER WASK IR     N+   P    LPP+EEY+  +++RR ++
Sbjct: 548 DIRDICQQAERHWASKLIRGQVPKNDKGEP---SLPPVEEYVACSEQRRRSL 596


>tr|B4FJK5|B4FJK5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 69

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIRNNA--SSPMACGLPPLEEYIESAQKRRTTI 143
           D+RDVCQQAER WASK IR            LPP++EY+  A++RR ++
Sbjct: 5   DIRDVCQQAERHWASKLIRGQVPKDEKGEPSLPPIDEYLSCAEQRRKSL 53


>tr|O81459|O81459_ARATH T27D20.13 protein (Putative vesicle transfer
           ATPase) OS=Arabidopsis thaliana GN=AT4g04180 PE=3 SV=1
          Length = 536

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIR-----------NNASSPMACGLPPLEEYIESAQKRRTTIQV 149
           D+RDVCQ AER WASK I                      LPP++EY+ESA+ RR +++ 
Sbjct: 456 DIRDVCQGAERTWASKIINLYIVGQLIRRAKAGGEEQKITLPPIQEYLESAEARRKSLRS 515

Query: 150 MPSER 164
           +  ++
Sbjct: 516 VTEQK 520


>tr|A0C7Q6|A0C7Q6_PARTE Chromosome undetermined scaffold_156, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00035954001 PE=4 SV=1
          Length = 445

 Score = 36.6 bits (83), Expect = 0.66
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASKAIRNNASSPMACGLPPLEEYIESAQKR 131
           ++ D+C+ AERRWA+K IR   +      LP L +Y E+  +R
Sbjct: 402 NISDICKDAERRWAAKLIRKEVTEQ----LPSLAQYKETLTQR 440


>tr|A3AB72|A3AB72_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008044 PE=3 SV=1
          Length = 591

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +3

Query: 3   DLRDVCQQAERRWASK 50
           D+RD+CQQAER WASK
Sbjct: 544 DIRDICQQAERHWASK 559


>tr|Q64911|Q64911_9ALPH Glycoprotein G (Fragment) OS=Equid
           herpesvirus 8 PE=4 SV=1
          Length = 411

 Score = 33.5 bits (75), Expect = 5.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 113 RECTEKENYHSSNAI*ARSSCKARGSMATICGSLKGLSTCVLLVMILY 256
           R C  ++N H+   +     C  +     IC +L GL TC ++ +I+Y
Sbjct: 333 RSCQNEDNAHTGGVLNGLQDCDNQLKTVYICLALIGLGTCAMIGLIVY 380


>tr|B4MW79|B4MW79_DROWI GK14929 OS=Drosophila willistoni GN=GK14929
           PE=4 SV=1
          Length = 897

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
 Frame = -2

Query: 371 TDVTIYSALFTSCPLVTHDSLIILTQICYDMIWPLY-SRYIIS*QEE---------HRWT 222
           +DVTI   LF SCPL   DS     Q+ +  IW  + S Y+I    E           W 
Sbjct: 758 SDVTIGPRLFLSCPLDLKDS-----QVWFTDIWNYHLSPYLIEAVREGVQLYGRRGGAWN 812

Query: 221 DPSNYHR-WWPCCPGPCTMTSLR 156
           DPS + R  +P   GP ++  LR
Sbjct: 813 DPSTFIRNSYPWPYGPDSVPPLR 835