DK947298
Clone id YMU02A01NGRL0015_H09
Library
Length 385
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_H09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGAAACCGAGTCACGGCTCTGC
TTATCGCTTAGACTTGCGCAGGCAGAGCTCTCTGCTGCTGCAAGTCTAGGCTAAGCTTAG
CTGGGCTCTCCCCTCGCTCTTCCAGGAGCCTGCTCTCTCGCCTTTCTCCGATCTTGTGCC
CTGTCGCGGTTTTTCTTTGTGCACCATTCTCAGGAATGGCTGCAATGGCAAAGTCTTGTC
TTGACAAGACAACTGCTTTACAGGCCTCACCGTTTAGGCAGGATGGAGTTGCCTCCTCAG
CGAAGTGTGGACAACATGCAATTCTAAGCATGCCCCTCCACCAGAGTAAAACCAGGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q84WP6
Definition sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana
Align length 63
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947298|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_H09, 5'
(316 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabid... 31 2.2
sp|Q6FR48|HIR2_CANGA Protein HIR2 OS=Candida glabrata GN=HIR2 PE... 30 3.7
sp|O61363|HCYG_OCTDO Hemocyanin G-type, units Oda to Odg OS=Octo... 30 4.9
sp|A8ABM7|DTDA_IGNH4 D-tyrosyl-tRNA(Tyr) deacylase OS=Ignicoccus... 29 6.3
sp|Q9LPI7|NAC12_ARATH NAC domain-containing protein 12 OS=Arabid... 29 6.4
sp|Q2NTK9|OTSA_SODGM Alpha,alpha-trehalose-phosphate synthase [U... 29 8.3

>sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43
OS=Arabidopsis thaliana GN=EMB2301 PE=2 SV=2
Length = 365

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3

Query: 215 QLSCQDKTLPLQPFLRMVHKEKPRQ-GTRSEKGERAGSWKSEGRAQLSLA*TCSSRELCL 39
Q C+ T P + HK+K GTR+ + AG WK+ GR ++ + + R + +
Sbjct: 62 QEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS---NGRRIGM 118

Query: 38 RKS 30
RK+
Sbjct: 119 RKT 121


>sp|Q6FR48|HIR2_CANGA Protein HIR2 OS=Candida glabrata GN=HIR2 PE=3
SV=1
Length = 997

Score = 30.0 bits (66), Expect = 3.7
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Frame = +1

Query: 70 AKLSWALPSLFQEPALSP---FSD--LVPCRGFSLCTILRNG------CNGKVLS*QDNC 216
+KL + + ++F P LSP +SD L ++C++ NG NG N
Sbjct: 740 SKLEFPVTTIF--PLLSPSIRYSDDILTRAENITMCSVTNNGFPIATLSNGDGYMYDKNM 797

Query: 217 FTGLTV*AGWSCLLSEVWTTCNSKHAPP 300
T L V GW S+ W + N+ + P
Sbjct: 798 ETWLLVSDGWWAYGSQYWDSTNNSNLIP 825


>sp|O61363|HCYG_OCTDO Hemocyanin G-type, units Oda to Odg OS=Octopus
dofleini GN=ODHCY PE=1 SV=1
Length = 2896

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3

Query: 114 SLAFLRSCALSRFFFVHHSQE---WLQWQSLVLTRQLLYRPH 230
S++ L + F++HHSQ W WQ+L + R Y+P+
Sbjct: 615 SMSSLHYTSFDPLFWLHHSQVDRLWAVWQALQIYRGKPYKPY 656


>sp|A8ABM7|DTDA_IGNH4 D-tyrosyl-tRNA(Tyr) deacylase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=dtdA PE=3 SV=1
Length = 245

Score = 29.3 bits (64), Expect = 6.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2

Query: 270 PHFAEEATPSCLNGEAC 220
PH+++ AT CL GEAC
Sbjct: 168 PHYSKRATKRCLEGEAC 184


>sp|Q9LPI7|NAC12_ARATH NAC domain-containing protein 12
OS=Arabidopsis thaliana GN=NST3 PE=2 SV=1
Length = 358

Score = 29.3 bits (64), Expect = 6.4
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3

Query: 215 QLSCQDKTLPLQPFLRMVHKEKPRQ-GTRSEKGERAGSWKSEGRAQLSLA*TCSS-RELC 42
Q C+ + P + HK+K GTR+ + AG WK+ GR ++ CS R +
Sbjct: 62 QEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKI----ICSCVRRIG 117

Query: 41 LRKS 30
LRK+
Sbjct: 118 LRKT 121


>sp|Q2NTK9|OTSA_SODGM Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] OS=Sodalis glossinidius (strain morsitans)
GN=otsA PE=3 SV=1
Length = 469

Score = 28.9 bits (63), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2

Query: 176 MAAMAKSCLDKTTALQASPFRQDGVASSAKCGQHAILSMPLHQSKTR 316
++ A + + T+AL +P+ +DGVAS+ LSMPL + K R
Sbjct: 384 LSHFAGAANELTSALLVNPYDRDGVASAL----DKALSMPLSERKAR 426


tr_hit_id B3LF36
Definition tr|B3LF36|B3LF36_OCHPR Transition protein 2 OS=Ochotona princeps
Align length 46
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947298|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_H09, 5'
(316 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3LF36|B3LF36_OCHPR Transition protein 2 OS=Ochotona princeps... 33 7.1

>tr|B3LF36|B3LF36_OCHPR Transition protein 2 OS=Ochotona princeps
GN=Tnp2 PE=4 SV=1
Length = 140

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1

Query: 217 SSCLVKTRLCHCSHS*EWCTKKNRDRAQDRRKAREQAPGRARGEPS 80
S C +CS + C ++R R++ R ++R + P +RG PS
Sbjct: 27 SQCKCSRHCQNCSPNCSRCQNRSRSRSRSRSRSRSRGPSGSRGPPS 72