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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947300
Clone id YMU02A01NGRL0015_H11
Library
Length 257
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_H11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ATCGATTAATCTAACCTATATATTTGGTCGAAGTTACTTGCCCATATTTATACGACTCTG
AGCAGGACGTGGAGAACAAGGTCAGACCCTAACCCTGCTGACGATTTCTTGGCCATCTTT
GAAGATGATCGAGGTGGTGCTGAACGACAGGCTGGGCAAGAAGGTGAGAGTGAAATGTAA
CGAAGACGACACCATAGGCGACCTGAAGAAGCTCGTGGCTGCGCAGACGGGCACTCGCCC
TGAGAAGATTCGCATCC
■■Homology search results ■■ -
sp_hit_id Q9FGZ9
Definition sp|Q9FGZ9|UBL5_ARATH Ubiquitin-like protein 5 OS=Arabidopsis thaliana
Align length 44
Score (bit) 85.1
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947300|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_H11, 5'
         (257 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FGZ9|UBL5_ARATH Ubiquitin-like protein 5 OS=Arabidopsis tha...    85   1e-16
sp|Q7SXF2|UBL5_DANRE Ubiquitin-like protein 5 OS=Danio rerio GN=...    77   3e-14
sp|Q791B0|UBL5_PSAOB Ubiquitin-like protein 5 OS=Psammomys obesu...    75   1e-13
sp|Q9EPV8|UBL5_MOUSE Ubiquitin-like protein 5 OS=Mus musculus GN...    75   1e-13
sp|Q6EGX7|UBL5_MESAU Ubiquitin-like protein 5 OS=Mesocricetus au...    75   1e-13
sp|Q9BZL1|UBL5_HUMAN Ubiquitin-like protein 5 OS=Homo sapiens GN...    75   1e-13
sp|Q3T0Z3|UBL5_BOVIN Ubiquitin-like protein 5 OS=Bos taurus GN=U...    75   1e-13
sp|Q9V998|UBL5_DROME Ubiquitin-like protein 5 OS=Drosophila mela...    75   1e-13
sp|P91302|UBL5_CAEEL Ubiquitin-like protein 5 OS=Caenorhabditis ...    73   4e-13
sp|O94650|HUB1_SCHPO Ubiquitin-like modifier hub1 OS=Schizosacch...    70   4e-12
sp|Q54Q03|UBL5_DICDI Ubiquitin-like protein 5 OS=Dictyostelium d...    67   4e-11
sp|Q6FIX7|HUB1_CANGA Ubiquitin-like modifier HUB1 OS=Candida gla...    65   1e-10
sp|Q6Q546|HUB1_YEAST Ubiquitin-like modifier HUB1 OS=Saccharomyc...    63   5e-10
sp|Q6BUP7|HUB1_DEBHA Ubiquitin-like modifier HUB1 OS=Debaryomyce...    60   3e-09
sp|Q756X3|HUB1_ASHGO Ubiquitin-like modifier HUB1 OS=Ashbya goss...    59   1e-08
sp|Q6CU12|HUB1_KLULA Ubiquitin-like modifier HUB1 OS=Kluyveromyc...    55   8e-08
sp|Q496Z0|ELP2_RAT Elongator complex protein 2 OS=Rattus norvegi...    33   0.57 
sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=Mus musculus...    32   1.3  
sp|Q55282|MNTB_SYNY3 Manganese transport system membrane protein...    31   2.2  
sp|Q4R7M2|DPEP3_MACFA Dipeptidase 3 OS=Macaca fascicularis GN=DP...    30   2.8  
sp|P32916|SRPR_YEAST Signal recognition particle receptor subuni...    29   8.2  
sp|Q2HG02|MCR1_CHAGB NADH-cytochrome b5 reductase 2 OS=Chaetomiu...    29   8.2  
sp|A6MMV6|CEMA_ILLOL Chloroplast envelope membrane protein OS=Il...    29   8.2  

>sp|Q9FGZ9|UBL5_ARATH Ubiquitin-like protein 5 OS=Arabidopsis
           thaliana GN=UBL5 PE=2 SV=1
          Length = 73

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTR EKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRI 44


>sp|Q7SXF2|UBL5_DANRE Ubiquitin-like protein 5 OS=Danio rerio
           GN=ubl5 PE=3 SV=1
          Length = 73

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEVV NDRLGKKVRVKCN++DTIGDLKKL+AAQTGTR EKI
Sbjct: 1   MIEVVCNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGTRWEKI 42


>sp|Q791B0|UBL5_PSAOB Ubiquitin-like protein 5 OS=Psammomys obesus
           GN=UBL5 PE=3 SV=1
          Length = 73

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKI 42


>sp|Q9EPV8|UBL5_MOUSE Ubiquitin-like protein 5 OS=Mus musculus
           GN=Ubl5 PE=1 SV=1
          Length = 73

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKI 42


>sp|Q6EGX7|UBL5_MESAU Ubiquitin-like protein 5 OS=Mesocricetus
           auratus GN=UBL5 PE=3 SV=1
          Length = 73

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKI 42


>sp|Q9BZL1|UBL5_HUMAN Ubiquitin-like protein 5 OS=Homo sapiens
           GN=UBL5 PE=1 SV=1
          Length = 73

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKI 42


>sp|Q3T0Z3|UBL5_BOVIN Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5
           PE=3 SV=1
          Length = 73

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKI 42


>sp|Q9V998|UBL5_DROME Ubiquitin-like protein 5 OS=Drosophila
           melanogaster GN=ubl PE=2 SV=1
          Length = 73

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIE+  NDRLGKKVRVKCN DDTIGDLKKL+AAQTGT+ EKI
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKI 42


>sp|P91302|UBL5_CAEEL Ubiquitin-like protein 5 OS=Caenorhabditis
           elegans GN=ubl-5 PE=2 SV=1
          Length = 73

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIE+ +NDRLGKKVR+KCN  DTIGDLKKL+AAQTGTR EKI
Sbjct: 1   MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKI 42


>sp|O94650|HUB1_SCHPO Ubiquitin-like modifier hub1
           OS=Schizosaccharomyces pombe GN=hub1 PE=1 SV=1
          Length = 73

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKI 250
           MIEV+ NDRLGKKVRVKC  DDT+GD KKLVAAQTGT P +I
Sbjct: 1   MIEVLCNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGTDPRRI 42
tr_hit_id Q2QXT9
Definition tr|Q2QXT9|Q2QXT9_ORYSJ Os12g0143100 protein OS=Oryza sativa subsp. japonica
Align length 45
Score (bit) 91.3
E-value 2.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947300|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_H11, 5'
         (257 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2QXT9|Q2QXT9_ORYSJ Os12g0143100 protein OS=Oryza sativa subs...    91   2e-17
tr|Q2RAM6|Q2RAM6_ORYSJ Os11g0145400 protein OS=Oryza sativa subs...    89   8e-17
tr|B4FLL1|B4FLL1_MAIZE Putative uncharacterized protein OS=Zea m...    89   8e-17
tr|B4FFL1|B4FFL1_MAIZE Putative uncharacterized protein OS=Zea m...    89   8e-17
tr|A9TYU2|A9TYU2_PHYPA Predicted protein OS=Physcomitrella paten...    89   8e-17
tr|A8J6M2|A8J6M2_CHLRE Predicted protein OS=Chlamydomonas reinha...    89   8e-17
tr|A3CEV3|A3CEV3_ORYSJ Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|A2ZI00|A2ZI00_ORYSI Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|A2ZBD8|A2ZBD8_ORYSI Putative uncharacterized protein OS=Oryza...    89   8e-17
tr|A9NLJ5|A9NLJ5_PICSI Putative uncharacterized protein OS=Picea...    88   2e-16
tr|Q9M1U1|Q9M1U1_ARATH Putative uncharacterized protein T14D3.12...    88   2e-16
tr|B6TNW1|B6TNW1_MAIZE Ubiquitin-like protein 5 OS=Zea mays PE=4...    87   4e-16
tr|A4S3H1|A4S3H1_OSTLU Predicted protein OS=Ostreococcus lucimar...    87   4e-16
tr|A6N040|A6N040_ORYSI Ubiquitin-like protein 5 (Fragment) OS=Or...    87   5e-16
tr|A3A993|A3A993_ORYSJ Putative uncharacterized protein OS=Oryza...    87   5e-16
tr|Q6K220|Q6K220_ORYSJ Os02g0628800 protein OS=Oryza sativa subs...    86   7e-16
tr|A6N069|A6N069_ORYSI Putative uncharacterized protein OS=Oryza...    86   7e-16
tr|A5H8A3|A5H8A3_HORVU Ubiquitin-like protein 5 OS=Hordeum vulga...    86   7e-16
tr|Q570V8|Q570V8_ARATH Ubiquitin-like protein OS=Arabidopsis tha...    85   2e-15
tr|B8CAM9|B8CAM9_THAPS Ubiquitin like protein OS=Thalassiosira p...    85   2e-15
tr|A9PD58|A9PD58_POPTR Putative uncharacterized protein OS=Popul...    84   3e-15
tr|Q8I545|Q8I545_PLAF7 Ubiquitin-like protein, putative OS=Plasm...    82   2e-14
tr|Q7RBW4|Q7RBW4_PLAYO Ubiquitin-like protein OS=Plasmodium yoel...    82   2e-14
tr|Q4YUJ7|Q4YUJ7_PLABE Ubiquitin-like protein, putative OS=Plasm...    82   2e-14
tr|B3LD34|B3LD34_PLAKH Ubiquitin-like protein, putative OS=Plasm...    82   2e-14
tr|A5K8P1|A5K8P1_PLAVI Ubiquitin-like protein, putative OS=Plasm...    82   2e-14
tr|B6KBA2|B6KBA2_TOXGO Ubiquitin-like protein 5, putative OS=Tox...    78   2e-13
tr|B7FUA9|B7FUA9_PHATR Predicted protein OS=Phaeodactylum tricor...    77   4e-13
tr|Q4UBE9|Q4UBE9_THEAN Ubiquitin-like protein, putative OS=Theil...    77   4e-13
tr|Q4MZ69|Q4MZ69_THEPA Ubiquitin, putative OS=Theileria parva GN...    77   4e-13

>tr|Q2QXT9|Q2QXT9_ORYSJ Os12g0143100 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0143100 PE=4 SV=1
          Length = 278

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +2

Query: 122 KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 205 KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 249


>tr|Q2RAM6|Q2RAM6_ORYSJ Os11g0145400 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0145400 PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|B4FLL1|B4FLL1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|B4FFL1|B4FFL1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|A9TYU2|A9TYU2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_226768 PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|A8J6M2|A8J6M2_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_150548 PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|A3CEV3|A3CEV3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_033825 PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|A2ZI00|A2ZI00_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37438 PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|A2ZBD8|A2ZBD8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35087 PE=4 SV=1
          Length = 73

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 44


>tr|A9NLJ5|A9NLJ5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 73

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +2

Query: 125 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRI 256
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRP+KIRI
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPDKIRI 44