DK947308 |
Clone id |
YMU02A01NGRL0015_H19 |
Library |
YMU02 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_H19. 5' end sequence. |
Accession |
DK947308 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL820Contig1 |
Sequence |
GAGAGAGAGACAGACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGATGC CCACCTTGAACATCAGCACTAATGTGCCCTTGGACGGAGTCTCCACCTCCGACATTCTCA AGGATGCCAGTAAAGCTGTCGCCAAGACTGTTGGCAAACCAGAACAGTATGTGATGGTAC TGCTACGAGGTGGCGTACCCATGTCATTTGGTGGTAGCGAGGAGCCTGCTGCATATGGTG AGCTTGCCTCCATAGGGGGCCTGGGGCCATCTGTTAACAAGTCGATTAGTGCGGCCATTG CAGCCATTCTAGAGTCCAAGCTATCAGTGCCCAAATCTCGATTCTACTTGAAGTTCTCTG ATGTGAAGGGTTCAGACTTTGGATGGAATGGTTCAACATTTTGAGAGTGGACAACAAGTC TCCTGATGATGATTTATATCTGGTATATGGACAAATGGAAGCCTTATAAAACCAATCTAT TTTATGTATCTTGGCCATTCCTTAGACAGTGCAGGTACCCACAGTCTTTTTAAAGTACAT ATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P91850 |
Definition |
sp|P91850|MIFH_BRUMA Macrophage migration inhibitory factor homolog OS=Brugia malayi |
Align length |
114 |
Score (bit) |
94.0 |
E-value |
4.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SRE7 |
Definition |
tr|A9SRE7|A9SRE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
115 |
Score (bit) |
158.0 |
E-value |
2.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947308|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_H19, 5' (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SRE7|A9SRE7_PHYPA Predicted protein OS=Physcomitrella paten... 158 2e-37 tr|B8LPF1|B8LPF1_PICSI Putative uncharacterized protein OS=Picea... 154 3e-36 tr|A9NRK6|A9NRK6_PICSI Putative uncharacterized protein OS=Picea... 154 3e-36 tr|B3TLP2|B3TLP2_ELAGV Light-inducible protein ATLS1 OS=Elaeis g... 150 3e-35 tr|A9NTC0|A9NTC0_PICSI Putative uncharacterized protein OS=Picea... 149 7e-35 tr|B4FX16|B4FX16_MAIZE Macrophage migration inhibitory factor OS... 149 1e-34 tr|B8BIM7|B8BIM7_ORYSI Putative uncharacterized protein OS=Oryza... 147 3e-34 tr|B7F8E6|B7F8E6_ORYSJ cDNA, clone: J065029G04, full insert sequ... 147 3e-34 tr|B6TUZ6|B6TUZ6_MAIZE Macrophage migration inhibitory factor OS... 144 2e-33 tr|Q9M011|Q9M011_ARATH Light-inducible protein ATLS1 OS=Arabidop... 144 3e-33 tr|A9PCJ4|A9PCJ4_POPTR Putative uncharacterized protein OS=Popul... 144 3e-33 tr|A7QUD8|A7QUD8_VITVI Chromosome chr11 scaffold_177, whole geno... 143 5e-33 tr|Q9SMV2|Q9SMV2_ARATH AT-LS1 product OS=Arabidopsis thaliana GN... 142 9e-33 tr|Q42335|Q42335_ARATH MIF homologue (Fragment) OS=Arabidopsis t... 142 1e-32 tr|B7FN58|B7FN58_MEDTR Putative uncharacterized protein OS=Medic... 140 3e-32 tr|Q9LU69|Q9LU69_ARATH Light-inducible protein ATLS1-like (At5g5... 139 1e-31 tr|A9P9R4|A9P9R4_POPTR Putative uncharacterized protein OS=Popul... 136 6e-31 tr|A2YGN4|A2YGN4_ORYSI Putative uncharacterized protein OS=Oryza... 136 6e-31 tr|Q5Z858|Q5Z858_ORYSJ Os06g0699500 protein OS=Oryza sativa subs... 136 8e-31 tr|A7QFF7|A7QFF7_VITVI Chromosome chr8 scaffold_88, whole genome... 134 4e-30 tr|A3CE70|A3CE70_ORYSJ Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|Q2RBL5|Q2RBL5_ORYSJ Macrophage migration inhibitory factor fa... 126 6e-28 tr|Q2QYS8|Q2QYS8_ORYSJ Macrophage migration inhibitory factor fa... 126 6e-28 tr|Q0IQQ1|Q0IQQ1_ORYSJ Os12g0107500 protein OS=Oryza sativa subs... 126 6e-28 tr|B6TSN0|B6TSN0_MAIZE Macrophage migration inhibitory factor OS... 126 6e-28 tr|A8IQJ2|A8IQJ2_CHLRE Predicted protein OS=Chlamydomonas reinha... 115 1e-24 tr|Q9U920|Q9U920_TRITR Macrophage migration inhibitory factor-li... 100 5e-20 tr|A8PJU3|A8PJU3_BRUMA Bm-MIF-1, identical OS=Brugia malayi GN=B... 96 9e-19 tr|Q7U982|Q7U982_SYNPX Possible ATLS1-like light-inducible prote... 95 3e-18 tr|Q3AX31|Q3AX31_SYNS9 Possible ATLS1-like light-inducible prote... 95 3e-18
>tr|A9SRE7|A9SRE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166244 PE=4 SV=1 Length = 115
Score = 158 bits (399), Expect = 2e-37 Identities = 77/115 (66%), Positives = 86/115 (74%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MPTLNI TNVPLDGV TSDILKDASKAVA+ + KPE YV++ LRGG+PMSFGG+EEPAAY Sbjct: 1 MPTLNIQTNVPLDGVVTSDILKDASKAVAQILSKPESYVLISLRGGIPMSFGGTEEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGG+GP N VP +RFY+KF DVK SD GWNGSTF Sbjct: 61 GELISIGGVGPDTNKRLSAAISDILKTKLSVPSNRFYIKFFDVKRSDMGWNGSTF 115
>tr|B8LPF1|B8LPF1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 115
Score = 154 bits (389), Expect = 3e-36 Identities = 77/115 (66%), Positives = 88/115 (76%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MPTLN+STNVP+D V +SDILKDASK+VA+ +GKPE YVMVLL+GGVPM FGGSEEPAAY Sbjct: 1 MPTLNLSTNVPVDSVVSSDILKDASKSVARIIGKPESYVMVLLKGGVPMLFGGSEEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GE+ SIGGLGP VN V KSRFY+KF DV+GS FG+ GSTF Sbjct: 61 GEVVSIGGLGPGVNGKLSAAIADILESKQSVDKSRFYIKFYDVEGSYFGFRGSTF 115
>tr|A9NRK6|A9NRK6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 115
Score = 154 bits (389), Expect = 3e-36 Identities = 77/115 (66%), Positives = 88/115 (76%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MPTLN+STNVP+D V +SDILKDASK+VA+ +GKPE YVMVLL+GGVPM FGGSEEPAAY Sbjct: 1 MPTLNLSTNVPVDSVVSSDILKDASKSVARIIGKPESYVMVLLKGGVPMLFGGSEEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GE+ SIGGLGP VN V KSRFY+KF DV+GS FG+ GSTF Sbjct: 61 GEVVSIGGLGPGVNGKLSAAIADILESKLSVDKSRFYIKFYDVEGSYFGFRGSTF 115
>tr|B3TLP2|B3TLP2_ELAGV Light-inducible protein ATLS1 OS=Elaeis guineensis var. tenera PE=4 SV=1 Length = 115
Score = 150 bits (380), Expect = 3e-35 Identities = 73/115 (63%), Positives = 84/115 (73%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MP LN+STNV LDGV TS IL +A+K VAK +GKPE YVM++L+G VPMSFGG+E+P AY Sbjct: 1 MPCLNLSTNVSLDGVDTSAILSEATKTVAKLIGKPEAYVMIVLKGSVPMSFGGTEQPTAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGGL P VN VPKSRF+LKF D KGS+FGWNGSTF Sbjct: 61 GELVSIGGLNPDVNKKLSAAIASILETKLSVPKSRFFLKFYDTKGSNFGWNGSTF 115
>tr|A9NTC0|A9NTC0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 115
Score = 149 bits (377), Expect = 7e-35 Identities = 73/115 (63%), Positives = 86/115 (74%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MP+LNISTNVPL+G++TS+IL + SK+VAK +GKPE YVMV L+G V +SFGG+EEPAAY Sbjct: 1 MPSLNISTNVPLEGLNTSEILSETSKSVAKIIGKPEAYVMVQLKGSVAISFGGTEEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGGLG N VPKSRFY+KF DVK SDFGWNG+TF Sbjct: 61 GELVSIGGLGSDTNKKLSAAIATILDTKLKVPKSRFYIKFYDVKRSDFGWNGTTF 115
>tr|B4FX16|B4FX16_MAIZE Macrophage migration inhibitory factor OS=Zea mays PE=4 SV=1 Length = 115
Score = 149 bits (375), Expect = 1e-34 Identities = 74/115 (64%), Positives = 84/115 (73%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MP LN+STNV L+GV TS IL +ASK+VA +GKPE YVMV+L+G VPM+FGG++EPAAY Sbjct: 1 MPCLNVSTNVNLEGVDTSAILAEASKSVANIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGGL P VN VPKSRFYLKF D K SDFGWNGSTF Sbjct: 61 GELVSIGGLNPDVNKKLSAGIASILESKLSVPKSRFYLKFYDSKRSDFGWNGSTF 115
>tr|B8BIM7|B8BIM7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34803 PE=4 SV=1 Length = 115
Score = 147 bits (372), Expect = 3e-34 Identities = 72/115 (62%), Positives = 82/115 (71%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MP LN+STNV LDGV TS +L DASK VA +GKPE YVMV+L+G VPM+FGG++EPAAY Sbjct: 1 MPCLNVSTNVNLDGVDTSAVLADASKTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGGL P VN +PK RFYLKF D K SDFGWNG+TF Sbjct: 61 GELVSIGGLNPDVNKKLSAGIASILESKLSIPKGRFYLKFYDSKRSDFGWNGTTF 115
>tr|B7F8E6|B7F8E6_ORYSJ cDNA, clone: J065029G04, full insert sequence OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 115
Score = 147 bits (372), Expect = 3e-34 Identities = 72/115 (62%), Positives = 82/115 (71%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MP LN+STNV LDGV TS +L DASK VA +GKPE YVMV+L+G VPM+FGG++EPAAY Sbjct: 1 MPCLNVSTNVNLDGVDTSAVLADASKTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGGL P VN +PK RFYLKF D K SDFGWNG+TF Sbjct: 61 GELVSIGGLNPDVNKKLSAGIASILESKLSIPKGRFYLKFYDSKRSDFGWNGTTF 115
>tr|B6TUZ6|B6TUZ6_MAIZE Macrophage migration inhibitory factor OS=Zea mays PE=4 SV=1 Length = 115
Score = 144 bits (364), Expect = 2e-33 Identities = 70/115 (60%), Positives = 83/115 (72%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MPTLN+STNVP+D V +DIL+D SKAVA+ +GKPE YVMV + G VPMSF SEEPAAY Sbjct: 1 MPTLNLSTNVPVDAVVAADILRDCSKAVARIIGKPESYVMVSVNGSVPMSFAASEEPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGSTF 401 GEL SIGG+GP VN V +SRFY+KF DV+G +FG+NGSTF Sbjct: 61 GELVSIGGIGPGVNGKLSAAVAEVLEAKLSVSRSRFYIKFDDVRGHNFGFNGSTF 115
>tr|Q9M011|Q9M011_ARATH Light-inducible protein ATLS1 OS=Arabidopsis thaliana GN=F7A7_170 PE=4 SV=1 Length = 115
Score = 144 bits (363), Expect = 3e-33 Identities = 71/114 (62%), Positives = 81/114 (71%) Frame = +3
Query: 57 MPTLNISTNVPLDGVSTSDILKDASKAVAKTVGKPEQYVMVLLRGGVPMSFGGSEEPAAY 236 MP LN+STNV LDGV TS IL +AS VAK +GKPE YVM++L+G VPMSFGG+E+PAAY Sbjct: 1 MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60
Query: 237 GELASIGGLGPSVNXXXXXXXXXXXXXXXXVPKSRFYLKFSDVKGSDFGWNGST 398 GEL SIGGL VN VPKSRF+LKF D KGS FGWNG+T Sbjct: 61 GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDTKGSFFGWNGAT 114
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