DK947325
Clone id YMU02A01NGRL0015_I14
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_I14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTTGCAGTAAGAATAGCACGCATTTTAAAAAGCCGGCAGCAGCAAACTCTCCCTGGTCGC
TCTCGTCTCAGCTAGTCTTATGTTCATGCCGCTGTTTGTGAAAGTGCTATGCTTGAACAA
TGTCAACATCGCCATCAAAGAATATCACTGATTCAGAAATGATCGATGGTAAAGTGAGGA
ACAAGGATGAGAGAGTGCGCCTGAAAGTGGTTGTGGACAGCTGTGTCAAGAGATGGTTCG
AGGAATATTTACTTGCTGCTGAACAAGGTGATCGTGAGATGCAGTCCCTTGTAGGCGCAA
TGTACAACACAGGCTATGGAGTAACAAGGGATCCTATAAAGGGTAAGTTTTGGCTCGACA
GAGCTCGAAGCGGACACTGGAATCATAAAGATCGAAAACAATAAGAGCAGCCGCCTGAGC
ATTCTGCAATTATTGTGGGAGATGAAATATTATGTAAGCTCTCGTTTTTTCGGAGAGTCC
GTTGTCACTTTTTGTAGTGGGAAGTTCAAACAGCAACTTTGAAGGCTTCAGGTAGGGAAT
GTGGGAGAAGCTTTGGAGA
■■Homology search results ■■ -
sp_hit_id P77296
Definition sp|P77296|YBET_ECOLI Uncharacterized protein ybeT OS=Escherichia coli (strain K12)
Align length 54
Score (bit) 33.1
E-value 0.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947325|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_I14, 5'
(544 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P77296|YBET_ECOLI Uncharacterized protein ybeT OS=Escherichia... 33 0.90
sp|P77234|YBEQ_ECOLI Uncharacterized protein ybeQ OS=Escherichia... 32 1.5
sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisser... 32 1.5
sp|P44277|Y1625_HAEIN Uncharacterized protein HI1625 OS=Haemophi... 31 3.4
sp|P15085|CBPA1_HUMAN Carboxypeptidase A1 OS=Homo sapiens GN=CPA... 30 9.9

>sp|P77296|YBET_ECOLI Uncharacterized protein ybeT OS=Escherichia
coli (strain K12) GN=ybeT PE=4 SV=1
Length = 184

Score = 33.1 bits (74), Expect = 0.90
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3

Query: 234 WFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRARSGHWNHKDR 395
W++E AAEQG Q +G +Y G G+ + + + WL H+ + +R
Sbjct: 126 WYKE---AAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAER 176


>sp|P77234|YBEQ_ECOLI Uncharacterized protein ybeQ OS=Escherichia
coli (strain K12) GN=ybeQ PE=4 SV=2
Length = 325

Score = 32.3 bits (72), Expect = 1.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3

Query: 246 YLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRAR-SGH 377
Y +AAE G Q+ +G MY G GV +D FW +A GH
Sbjct: 123 YQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGH 167



Score = 32.3 bits (72), Expect = 1.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3

Query: 246 YLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA 365
YL +A+QG+R Q + YN G GV +D + +W +A
Sbjct: 195 YLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKA 234



Score = 29.6 bits (65), Expect = 9.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3

Query: 222 CVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGV-TRDPIKGKFWLD-RARSGH 377
C +E + AE+GD E Q +VG YN + + D K +WL A GH
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61


>sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisseria
meningitidis serogroup B GN=NMB1327 PE=1 SV=1
Length = 467

Score = 32.3 bits (72), Expect = 1.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3

Query: 246 YLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA 365
Y AAE G + Q+ +G+MY G G+T D + + W ++A
Sbjct: 370 YTEAAELGHSKAQTNLGSMYYFGQGMTADYNEARKWFEKA 409


>sp|P44277|Y1625_HAEIN Uncharacterized protein HI1625 OS=Haemophilus
influenzae GN=HI1625 PE=4 SV=1
Length = 165

Score = 31.2 bits (69), Expect = 3.4
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3

Query: 186 DERVRLKVVVDSCVKR-WFEEYLLA---AEQGDREMQSLVGAMYNTGYGVTRDPIKGKFW 353
D++ R+ + + K+ W + + + A +G+ QS +G +YN G G RD K +W
Sbjct: 33 DDQARMNLAQEFANKQQWIDVFNIMYPMALEGNITAQSNLGMLYNLGRGTVRDYEKAYWW 92

Query: 354 LDRA 365
A
Sbjct: 93 FSEA 96


>sp|P15085|CBPA1_HUMAN Carboxypeptidase A1 OS=Homo sapiens GN=CPA1
PE=1 SV=2
Length = 419

Score = 29.6 bits (65), Expect = 9.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2

Query: 207 LSGALSHPCSSLYHRSFLNQ*YSLMAMLTLFK 112
LSGA S+PCS YH F N + +++ K
Sbjct: 263 LSGASSNPCSETYHGKFANSEVEVKSIVDFVK 294


tr_hit_id A7QFH8
Definition tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera
Align length 71
Score (bit) 72.4
E-value 1.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947325|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_I14, 5'
(544 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome... 72 1e-11
tr|Q84W16|Q84W16_ARATH Putative uncharacterized protein At5g0536... 70 9e-11
tr|Q3E9L2|Q3E9L2_ARATH Uncharacterized protein At5g05360.2 (At5g... 69 2e-10
tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea... 67 5e-10
tr|A7Q3R7|A7Q3R7_VITVI Chromosome chr13 scaffold_48, whole genom... 67 6e-10
tr|Q9FLB8|Q9FLB8_ARATH Genomic DNA, chromosome 5, TAC clone:K18I... 67 8e-10
tr|B6TNI0|B6TNI0_MAIZE Putative uncharacterized protein OS=Zea m... 66 1e-09
tr|A8IVI2|A8IVI2_CHLRE Predicted protein OS=Chlamydomonas reinha... 65 3e-09
tr|Q10MR3|Q10MR3_ORYSJ Os03g0298600 protein OS=Oryza sativa subs... 64 5e-09
tr|A3AH17|A3AH17_ORYSJ Putative uncharacterized protein OS=Oryza... 64 5e-09
tr|Q5W6N1|Q5W6N1_ORYSJ Os05g0342900 protein OS=Oryza sativa subs... 62 1e-08
tr|A2Y3E1|A2Y3E1_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08
tr|O80906|O80906_ARATH Expressed protein (At2g38450) OS=Arabidop... 62 2e-08
tr|Q8LEQ5|Q8LEQ5_ARATH Putative uncharacterized protein OS=Arabi... 60 1e-07
tr|B6SI80|B6SI80_MAIZE Putative uncharacterized protein OS=Zea m... 59 2e-07
tr|B6T1M8|B6T1M8_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06
tr|B6TG32|B6TG32_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06
tr|A9W448|A9W448_METEP Sel1 domain protein repeat-containing pro... 47 6e-04
tr|B7KXK4|B7KXK4_METCH Sel1 domain protein repeat-containing pro... 47 6e-04
tr|A9THX4|A9THX4_PHYPA Predicted protein OS=Physcomitrella paten... 47 6e-04
tr|B1ZJH0|B1ZJH0_METPB Sel1 domain protein repeat-containing pro... 45 0.002
tr|B3ETJ2|B3ETJ2_AMOA5 Putative uncharacterized protein OS=Amoeb... 45 0.003
tr|B6JC81|B6JC81_OLICO Sel1 repeat family OS=Oligotropha carboxi... 44 0.007
tr|B3T6N4|B3T6N4_9ZZZZ Putative MORN repeat protein OS=unculture... 42 0.016
tr|A8HRA6|A8HRA6_AZOC5 Sel1-like repeat protein OS=Azorhizobium ... 42 0.016
tr|Q1Q8J6|Q1Q8J6_PSYCK Sel1 OS=Psychrobacter cryohalolentis (str... 42 0.021
tr|B8ILP5|B8ILP5_METNO Sel1 domain protein repeat-containing pro... 42 0.021
tr|A6CEG0|A6CEG0_9PLAN Putative uncharacterized protein OS=Planc... 42 0.021
tr|A4NMU8|A4NMU8_HAEIN Putative uncharacterized protein OS=Haemo... 42 0.021
tr|Q212Y0|Q212Y0_RHOPB Sel1-like OS=Rhodopseudomonas palustris (... 42 0.027

>tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037427001
PE=4 SV=1
Length = 100

Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/71 (52%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +3

Query: 192 RVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA-- 365
RV L VV CVKRWF++ L A+ GD MQ LVG MY +GYGV RD KG+ W+ RA
Sbjct: 12 RVPLSEVVSDCVKRWFQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQKGRVWMTRASR 71

Query: 366 -RSGHWNHKDR 395
RS W D+
Sbjct: 72 TRSSVWKVSDK 82


>tr|Q84W16|Q84W16_ARATH Putative uncharacterized protein At5g05360
(Fragment) OS=Arabidopsis thaliana GN=At5g05360 PE=2
SV=1
Length = 157

Score = 69.7 bits (169), Expect = 9e-11
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +3

Query: 192 RVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA-- 365
RV L VV+ CV+RWF++ L A+ GD MQ LVG MY +GYG+ +D KG+ W+++A
Sbjct: 71 RVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASR 130

Query: 366 -RSGHWNHKDRKQ*EQPPEHSA 428
RS W D+ PP ++A
Sbjct: 131 TRSSAWQVSDK-----PPGYNA 147


>tr|Q3E9L2|Q3E9L2_ARATH Uncharacterized protein At5g05360.2
(At5g05360) OS=Arabidopsis thaliana GN=At5g05360 PE=2
SV=1
Length = 153

Score = 68.6 bits (166), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +3

Query: 192 RVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA-- 365
RV L VV+ CV+RWF++ L A+ GD MQ LVG MY +GYG+ +D KG+ W+++A
Sbjct: 77 RVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASR 136

Query: 366 -RSGHWNHKDR 395
RS W D+
Sbjct: 137 TRSSAWQVSDK 147


>tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 144

Score = 67.4 bits (163), Expect = 5e-10
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = +3

Query: 141 NITDSEMIDGKVRNKDE--RVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTG 314
NI + I+ K+++ +E R+ LK VV C +RWF++ L A+ GD MQ LVG MY +G
Sbjct: 36 NIVSTSSINMKMQSGEEQNRLPLKEVVADCARRWFQDSLKEAKAGDTGMQVLVGQMYCSG 95

Query: 315 YGVTRDPIKGKFWLDRA 365
YGV RD +GK W +A
Sbjct: 96 YGVHRDIQRGKAWFQKA 112


>tr|A7Q3R7|A7Q3R7_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029389001
PE=4 SV=1
Length = 156

Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +3

Query: 153 SEMIDGKVRNKD--ERVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVT 326
SE + K+ + + R+ L VV C KRWF++ L A+ GD MQ LVG MY +GYGV+
Sbjct: 52 SERVRLKMESSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVS 111

Query: 327 RDPIKGKFWLDRA 365
RD KG+ W+ RA
Sbjct: 112 RDAQKGRAWISRA 124


>tr|Q9FLB8|Q9FLB8_ARATH Genomic DNA, chromosome 5, TAC clone:K18I23
OS=Arabidopsis thaliana PE=4 SV=1
Length = 179

Score = 66.6 bits (161), Expect = 8e-10
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Frame = +3

Query: 192 RVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA-- 365
RV L VV+ CV+RWF++ L A+ GD MQ LVG MY +GYG+ +D KG+ W+++A
Sbjct: 77 RVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASR 136

Query: 366 -RSGHW 380
RS W
Sbjct: 137 TRSSAW 142


>tr|B6TNI0|B6TNI0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 170

Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +3

Query: 186 DERVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRA 365
DERV L VV C +RWF++ L A GD MQ LVG MY +GYGV ++ K + W+++A
Sbjct: 77 DERVPLAEVVSDCTRRWFQDALKEARAGDITMQVLVGQMYRSGYGVNKNEHKARVWMEKA 136

Query: 366 ---RSGHWNHKDRK 398
RS W +++
Sbjct: 137 SRYRSTVWKVSNKR 150


>tr|A8IVI2|A8IVI2_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CGL10 PE=4 SV=1
Length = 136

Score = 64.7 bits (156), Expect = 3e-09
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = +3

Query: 189 ERVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDRAR 368
E + LK VV VKRWFE+ LL A++GD + Q+LVG MY GYG +D K W D+A
Sbjct: 64 EPIPLKYVVQEAVKRWFEDTLLEAQRGDVKQQALVGEMYKEGYGCQKDARAAKEWSDKAA 123

Query: 369 S 371
S
Sbjct: 124 S 124


>tr|Q10MR3|Q10MR3_ORYSJ Os03g0298600 protein OS=Oryza sativa subsp.
japonica GN=Os03g0298600 PE=2 SV=1
Length = 170

Score = 63.9 bits (154), Expect = 5e-09
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +3

Query: 183 KDERVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDR 362
+D+RV L VV C +RWF++ L A GD MQ LVG MY +GYGV ++ K + W ++
Sbjct: 71 EDDRVPLSEVVLDCTRRWFQDTLKEARAGDAAMQVLVGQMYRSGYGVNKNEHKAQIWTEK 130

Query: 363 A---RSGHWNHKDRK 398
A RS W +++
Sbjct: 131 ASRYRSTVWKVSNKR 145


>tr|A3AH17|A3AH17_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_010089 PE=4 SV=1
Length = 181

Score = 63.9 bits (154), Expect = 5e-09
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +3

Query: 183 KDERVRLKVVVDSCVKRWFEEYLLAAEQGDREMQSLVGAMYNTGYGVTRDPIKGKFWLDR 362
+D+RV L VV C +RWF++ L A GD MQ LVG MY +GYGV ++ K + W ++
Sbjct: 71 EDDRVPLSEVVLDCTRRWFQDTLKEARAGDAAMQVLVGQMYRSGYGVNKNEHKAQIWTEK 130

Query: 363 A---RSGHWNHKDRK 398
A RS W +++
Sbjct: 131 ASRYRSTVWKVSNKR 145