DK947365
Clone id YMU02A01NGRL0015_K14
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_K14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ACGCCTCTCTCGGTTGTAATGAAAAGAGAACGAAGATAAGGAGAACGACACCTACCTGCA
CTTTCAGTTCACCATGGCGAGCGTAGCCGTGGCCACTATACCTCCCTCGTGTTCGGCTCA
TCGCTCCCCGTCCGTATCGCCCAGCCCTTCGTCTGTCCTGCGCCAAGCTTCGCTGCAACC
CTTATGCTCAAAGGCTAAGATGGACGCTTTGAGGGAAGCTACTATGCCTTCATGCTTGTC
ATCTGGACTCGTAGCTGTGCTGTCACGAAAGGAGTGCAACTTGATCGTTACCCATGCGGT
TGCAGAAGCATTGAGGGAAGAATCTTCTGGAAAAGCAGAAGAGGGTGCTCCTGTGAATGA
GTTGTCCAAGTTACAGCTTGAGTCTGACCTTTTGAAAAAGAAGGCAAAACGTGCAGAGTT
GCGAAGAAAGAGGCTTGTAAGGAAACGTCACTTACGGAAGAAGGGTAGGTGGCCTCCTTC
AAAGATGGCAAAGCTAAAGAATGTTTGACTATTCATCTGGCTGCTCAATGGACTGTAACA
TCATTACACTTAAAAACAAAGTGAGATACTCACTG
■■Homology search results ■■ -
sp_hit_id P55101
Definition sp|P55101|INHA_HORSE Inhibin alpha chain OS=Equus caballus
Align length 73
Score (bit) 32.3
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947365|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_K14, 5'
(575 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P55101|INHA_HORSE Inhibin alpha chain OS=Equus caballus GN=IN... 32 1.7
sp|Q86V24|ADR2_HUMAN Adiponectin receptor protein 2 OS=Homo sapi... 32 1.7
sp|Q5GWE6|RRMT_XANOR Putative RNA 2'-O-ribose methyltransferase ... 32 2.3
sp|Q2NZK8|RRMT_XANOM Putative RNA 2'-O-ribose methyltransferase ... 32 2.3
sp|Q8PCB8|RRMT_XANCP Putative RNA 2'-O-ribose methyltransferase ... 32 2.3
sp|Q4UR65|RRMT_XANC8 Putative RNA 2'-O-ribose methyltransferase ... 32 2.3
sp|Q3BX58|RRMT_XANC5 Putative RNA 2'-O-ribose methyltransferase ... 32 2.3
sp|Q8PNZ9|RRMT_XANAC Putative RNA 2'-O-ribose methyltransferase ... 32 2.3
sp|O84418|PMPB_CHLTR Probable outer membrane protein pmpB OS=Chl... 32 3.0
sp|P04087|INHA_PIG Inhibin alpha chain OS=Sus scrofa GN=INHA PE=... 31 5.1
sp|Q04997|INHA_MOUSE Inhibin alpha chain OS=Mus musculus GN=Inha... 31 5.1
sp|A6H0U4|PURA_FLAPJ Adenylosuccinate synthetase OS=Flavobacteri... 30 8.6

>sp|P55101|INHA_HORSE Inhibin alpha chain OS=Equus caballus GN=INHA
PE=2 SV=1
Length = 367

Score = 32.3 bits (72), Expect = 1.7
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = +3

Query: 33 KIRRTTPTCTFSSPWRA*PWPLYLPRVRLIAPRPYRPALRLSCAKLRCNPYAQRL---RW 203
+ RR+TP PWP +RL+ P PA +C + N Q L RW
Sbjct: 230 RTRRSTPPL---------PWPWSPAALRLLQRPPEEPAAHANCHRAALNISFQELGWDRW 280

Query: 204 TL*GKLLCLHACH 242
+ + H CH
Sbjct: 281 IVHPRSFIFHYCH 293


>sp|Q86V24|ADR2_HUMAN Adiponectin receptor protein 2 OS=Homo sapiens
GN=ADIPOR2 PE=1 SV=1
Length = 386

Score = 32.3 bits (72), Expect = 1.7
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -3

Query: 330 PEDSSLNASATAWVTIKLHSFR--DSTATSPDDKHEG-IVASLKASILAFEHKGCSEAWR 160
P ++ L S T I+L D T +D H+G + L+AS+L+ HK SE
Sbjct: 4 PTENRLGCSRTPEPDIRLRKGHQLDGTRRGDNDSHQGDLEPILEASVLSSHHKKSSEEHE 63

Query: 159 RTDEGLGDTDG 127
+DE + +G
Sbjct: 64 YSDEAPQEDEG 74


>sp|Q5GWE6|RRMT_XANOR Putative RNA 2'-O-ribose methyltransferase
XOO3721 OS=Xanthomonas oryzae pv. oryzae GN=XOO3721 PE=3
SV=2
Length = 347

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKL 170
PWPL +PR++L+ P R AL+L A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q2NZK8|RRMT_XANOM Putative RNA 2'-O-ribose methyltransferase
XOO3514 OS=Xanthomonas oryzae pv. oryzae (strain MAFF
311018) GN=XOO3514 PE=3 SV=1
Length = 347

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKL 170
PWPL +PR++L+ P R AL+L A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q8PCB8|RRMT_XANCP Putative RNA 2'-O-ribose methyltransferase
XCC0816 OS=Xanthomonas campestris pv. campestris
GN=XCC0816 PE=3 SV=1
Length = 347

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKL 170
PWPL +PR++L+ P R AL+L A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q4UR65|RRMT_XANC8 Putative RNA 2'-O-ribose methyltransferase
XC_3414 OS=Xanthomonas campestris pv. campestris (strain
8004) GN=XC_3414 PE=3 SV=1
Length = 347

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKL 170
PWPL +PR++L+ P R AL+L A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q3BX58|RRMT_XANC5 Putative RNA 2'-O-ribose methyltransferase
XCV0924 OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=XCV0924 PE=3 SV=1
Length = 347

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKL 170
PWPL +PR++L+ P R AL+L A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|Q8PNZ9|RRMT_XANAC Putative RNA 2'-O-ribose methyltransferase
XAC0889 OS=Xanthomonas axonopodis pv. citri GN=XAC0889
PE=3 SV=1
Length = 347

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKL 170
PWPL +PR++L+ P R AL+L A L
Sbjct: 166 PWPLGIPRLKLLPEAPSRSALKLDEALL 193


>sp|O84418|PMPB_CHLTR Probable outer membrane protein pmpB
OS=Chlamydia trachomatis GN=pmpB PE=2 SV=2
Length = 1754

Score = 31.6 bits (70), Expect = 3.0
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -3

Query: 357 FTGAPSSAFPEDSSLNASATAWVTIKLHSFRDSTATSPDDKHEGIVASLKASILAFEHKG 178
FT P++ ++ N+S++ T + DST T+PD K G + + +L+F +
Sbjct: 66 FTNIPTTDTTTPTNSNSSSSNGETASVSEDSDSTTTTPDPKGGGAFYNAHSGVLSFMTRS 125

Query: 177 CSE 169
+E
Sbjct: 126 GTE 128


>sp|P04087|INHA_PIG Inhibin alpha chain OS=Sus scrofa GN=INHA PE=1
SV=2
Length = 364

Score = 30.8 bits (68), Expect = 5.1
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = +3

Query: 87 PWPLYLPRVRLIAPRPYRPALRLSCAKLRCNPYAQRL---RWTL*GKLLCLHACH 242
PWP +RL+ P PA+ C + N Q L RW + H CH
Sbjct: 236 PWPWSPAALRLLQRPPEEPAVHADCHRASLNISFQELGWDRWIVHPPSFIFHYCH 290


tr_hit_id B0DQH2
Definition tr|B0DQH2|B0DQH2_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 76
Score (bit) 35.0
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947365|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_K14, 5'
(575 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0DQH2|B0DQH2_LACBS Predicted protein OS=Laccaria bicolor (st... 35 2.9
tr|A8NGA9|A8NGA9_COPC7 Predicted protein OS=Coprinopsis cinerea ... 35 2.9
tr|B1G5G9|B1G5G9_9BURK Putative non-ribosomal peptide synthetase... 33 8.6
tr|B0D650|B0D650_LACBS Predicted protein OS=Laccaria bicolor (st... 33 8.6

>tr|B0DQH2|B0DQH2_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_295321 PE=4 SV=1
Length = 512

Score = 35.0 bits (79), Expect = 2.9
Identities = 27/76 (35%), Positives = 36/76 (47%)
Frame = -3

Query: 471 HLPFFRK*RFLTSLFLRNSARFAFFFKRSDSSCNLDNSFTGAPSSAFPEDSSLNASATAW 292
HLP R + SL + + R+ F R+DSS NSF SS+ S+ AS TA
Sbjct: 34 HLP-----RQVVSLNITSGTRYTTNFYRADSSSAPSNSFLELSSSSLTPSSTSEASNTAS 88

Query: 291 VTIKLHSFRDSTATSP 244
T +L + ST P
Sbjct: 89 STFQLLTDTVSTTQIP 104


>tr|A8NGA9|A8NGA9_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05092 PE=4
SV=1
Length = 333

Score = 35.0 bits (79), Expect = 2.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3

Query: 363 NSFTGAPSSAFPEDSSLNASATAWVTIKLHSFRDSTATSPDDKHEGIVASLKA 205
+ FTG+ S S SAT V I L +RD T T P D ++G+ +++
Sbjct: 248 SQFTGSASQHSYIPGSGTRSATGGVNIALRKYRDPTYTGPSDVYDGVKVQVRS 300


>tr|B1G5G9|B1G5G9_9BURK Putative non-ribosomal peptide synthetase
OS=Burkholderia graminis C4D1M GN=BgramDRAFT_4606 PE=4
SV=1
Length = 478

Score = 33.5 bits (75), Expect = 8.6
Identities = 29/116 (25%), Positives = 47/116 (40%)
Frame = -3

Query: 423 RNSARFAFFFKRSDSSCNLDNSFTGAPSSAFPEDSSLNASATAWVTIKLHSFRDSTATSP 244
R A + F+ S + CNL + P AF + A+ W+ L R P
Sbjct: 239 RQHAYWQFYLPTSTAKCNLLYALARRPDRAFGLIGAAFAAEAEWLAFGLALERACAHLQP 298

Query: 243 DDKHEGIVASLKASILAFEHKGCSEAWRRTDEGLGDTDGER*AEHEGGIVATATLA 76
++ +LK+++ + C+ A RR + G A++ GIVA LA
Sbjct: 299 AGRNHTDAEALKSAL----EQRCARALRRVADNFG---AAARAQYVQGIVAGERLA 347


>tr|B0D650|B0D650_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_318163 PE=4 SV=1
Length = 568

Score = 33.5 bits (75), Expect = 8.6
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3

Query: 30 TKIRRTTPTCTFSSPWRA*PWPLYLPRVRLIAPRPYRPALRLSCAKLRCNPYAQ-RLRWT 206
T R +T TC W P+PL LP ++ P RP LSCA + + + ++ WT
Sbjct: 495 TSSRISTNTCDNRQSW---PYPLQLPTHLILCPLTIRPFEILSCAPHQLDQHIPGKVFWT 551

Query: 207 L*GKLLCLHACHLDS*LC 260
LCL + + S C
Sbjct: 552 -----LCLFSFFMRSDRC 564